RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W NSE1Q07913 336 aa2.83□□□□□ -1.96
TOM1YDR457W RPN8Q08723 338 aaKnown RBP2.83□□□□□ -1.96
TOM1YDR457W YOR378WQ08902 515 aa2.83□□□□□ -1.96
TOM1YDR457W SIR4P11978 1358 aa2.83□□□□□ -1.96
TOM1YDR457W YBL010CP32788 280 aa2.83□□□□□ -1.96
TOM1YDR457W RIB5P38145 238 aa2.83□□□□□ -1.96
TOM1YDR457W MBP1P39678 833 aa2.83□□□□□ -1.96
TOM1YDR457W PHB2P50085 310 aa2.83□□□□□ -1.96
TOM1YDR457W NCS2P53923 493 aaPredicted RBP2.83□□□□□ -1.96
TOM1YDR457W UME1Q03010 460 aa2.83□□□□□ -1.96
TOM1YDR457W ARP10Q04549 284 aa2.83□□□□□ -1.96
TOM1YDR457W PRM6Q04705 352 aa2.83□□□□□ -1.96
TOM1YDR457W NAT1P12945 854 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W MSM1P22438 575 aa2.82□□□□□ -1.96
TOM1YDR457W ILV6P25605 309 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W BUD2P33314 1104 aa2.82□□□□□ -1.96
TOM1YDR457W YHL012WP38709 493 aa2.82□□□□□ -1.96
TOM1YDR457W SLM1P40485 686 aa2.82□□□□□ -1.96
TOM1YDR457W DIM1P41819 318 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W YJL132WP47014 750 aa2.82□□□□□ -1.96
TOM1YDR457W ATH1P48016 1211 aa2.82□□□□□ -1.96
TOM1YDR457W COS1P53822 381 aa2.82□□□□□ -1.96
TOM1YDR457W VHS1Q03785 461 aa2.82□□□□□ -1.96
TOM1YDR457W YOR059CQ08448 450 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W KSS1P14681 368 aa2.82□□□□□ -1.96
TOM1YDR457W KIP2P28743 706 aa2.82□□□□□ -1.96
TOM1YDR457W RAD16P31244 790 aa2.82□□□□□ -1.96
TOM1YDR457W YKL075CP36083 450 aa2.82□□□□□ -1.96
TOM1YDR457W YHR218WP38899 603 aa2.82□□□□□ -1.96
TOM1YDR457W OAF1P39720 1047 aaPredicted RBP2.82□□□□□ -1.96
TOM1YDR457W THI6P41835 540 aa2.82□□□□□ -1.96
TOM1YDR457W FAR7P43592 221 aa2.82□□□□□ -1.96
TOM1YDR457W MRK1P50873 501 aa2.82□□□□□ -1.96
TOM1YDR457W OXR1Q08952 273 aa2.82□□□□□ -1.96
TOM1YDR457W YLR053CQ12026 108 aa2.82□□□□□ -1.96
TOM1YDR457W YDR061WQ12298 539 aa2.82□□□□□ -1.96
TOM1YDR457W YBL111CQ3E7Y5 667 aa2.82□□□□□ -1.96
TOM1YDR457W VMA1P17255 1071 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W STE4P18851 423 aa2.82□□□□□ -1.96
TOM1YDR457W DGR2P32330 852 aa2.82□□□□□ -1.96
TOM1YDR457W RNP1P32385 249 aa2.82□□□□□ -1.96
TOM1YDR457W RSM22P36056 628 aa2.82□□□□□ -1.96
TOM1YDR457W GEF1P37020 779 aa2.82□□□□□ -1.96
TOM1YDR457W HAL5P38970 855 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W EXO1P39875 702 aa2.82□□□□□ -1.96
TOM1YDR457W MNT2P53059 558 aa2.82□□□□□ -1.96
TOM1YDR457W PUS6P53294 404 aa2.82□□□□□ -1.96
TOM1YDR457W TIF35Q04067 274 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W FMP25Q08023 583 aa2.82□□□□□ -1.96
TOM1YDR457W RMD5Q12508 421 aa2.82□□□□□ -1.96
TOM1YDR457W PDC6P26263 563 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W PGM1P33401 570 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W APT2P36973 181 aa2.82□□□□□ -1.96
TOM1YDR457W HIS2P38635 335 aa2.82□□□□□ -1.96
TOM1YDR457W YHR020WP38708 688 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W YHR219WP38900 624 aa2.82□□□□□ -1.96
TOM1YDR457W MIC19P43594 170 aa2.82□□□□□ -1.96
TOM1YDR457W YPT11P48559 417 aa2.82□□□□□ -1.96
TOM1YDR457W YGR122WP53272 402 aa2.82□□□□□ -1.96
TOM1YDR457W PGA2P53903 129 aa2.82□□□□□ -1.96
TOM1YDR457W ARG5,6Q01217 863 aa2.82□□□□□ -1.96
TOM1YDR457W JIP4Q03361 876 aa2.82□□□□□ -1.96
TOM1YDR457W ECI1Q05871 280 aa2.82□□□□□ -1.96
TOM1YDR457W SGO1Q08490 590 aa2.82□□□□□ -1.96
TOM1YDR457W CBP2P03874 630 aaPredicted RBP2.82□□□□□ -1.96
TOM1YDR457W SRP54P20424 541 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W RDS1P25611 832 aa2.82□□□□□ -1.96
TOM1YDR457W BMH1P29311 267 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W SHC1P39000 512 aa2.82□□□□□ -1.96
TOM1YDR457W ERP2P39704 215 aa2.82□□□□□ -1.96
TOM1YDR457W JEM1P40358 645 aa2.82□□□□□ -1.96
TOM1YDR457W FKH1P40466 484 aa2.82□□□□□ -1.96
TOM1YDR457W GUS1P46655 708 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
TOM1YDR457W ARH1P48360 493 aa2.82□□□□□ -1.96
TOM1YDR457W ELA1P53861 379 aaPredicted RBP2.82□□□□□ -1.96
TOM1YDR457W ERV25P54837 211 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W MRX10Q05648 414 aa2.82□□□□□ -1.96
TOM1YDR457W NDE2Q07500 545 aa2.82□□□□□ -1.96
TOM1YDR457W YLR031WQ07978 186 aa2.82□□□□□ -1.96
TOM1YDR457W TMA46Q12000 345 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W NUP157P40064 1391 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W DNA2P38859 1522 aa2.82□□□□□ -1.96
TOM1YDR457W RAD18P10862 487 aa2.82□□□□□ -1.96
TOM1YDR457W PHO8P11491 566 aa2.82□□□□□ -1.96
TOM1YDR457W GBP2P25555 427 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
TOM1YDR457W ATP11P32453 318 aa2.82□□□□□ -1.96
TOM1YDR457W FET3P38993 636 aa2.82□□□□□ -1.96
TOM1YDR457W RET2P43621 546 aa2.82□□□□□ -1.96
TOM1YDR457W ORC5P50874 479 aa2.82□□□□□ -1.96
TOM1YDR457W MAL13P53338 473 aa2.82□□□□□ -1.96
TOM1YDR457W HST2P53686 357 aa2.82□□□□□ -1.96
TOM1YDR457W TIM11P81449 96 aaPredicted RBP2.82□□□□□ -1.96
TOM1YDR457W SRP1Q02821 542 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W RAD33Q04231 177 aa2.82□□□□□ -1.96
TOM1YDR457W VTI1Q04338 217 aa2.82□□□□□ -1.96
TOM1YDR457W YLR177WQ06251 628 aa2.82□□□□□ -1.96
TOM1YDR457W YPL216WQ08964 1102 aa2.82□□□□□ -1.96
TOM1YDR457W YRR1Q12172 810 aa2.82□□□□□ -1.96
TOM1YDR457W KIN2P13186 1147 aaKnown RBP2.82□□□□□ -1.96
TOM1YDR457W ATE1P16639 503 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms