RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	PDR1	P12383	1068 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	YPK1	P12688	680 aa	Known RBP	10.42	□□□□□ -0.74
MRP20	YDR405W	SGF29	P25554	259 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	PSE1	P32337	1089 aa	Known RBP	10.42	□□□□□ -0.74
MRP20	YDR405W	YMR124W	P39523	943 aa	Known RBP	10.42	□□□□□ -0.74
MRP20	YDR405W	PRK1	P40494	810 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	ATH1	P48016	1211 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	JJJ1	P53863	590 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	SFB2	P53953	876 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	SPG3	Q04398	127 aa	Predicted RBP	10.42	□□□□□ -0.74
MRP20	YDR405W	NSE1	Q07913	336 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	YOR059C	Q08448	450 aa	Known RBP	10.42	□□□□□ -0.74
MRP20	YDR405W	APL4	Q12028	832 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	SVS1	Q12254	260 aa		10.42	□□□□□ -0.74
MRP20	YDR405W	LPX1	Q12405	387 aa	Known RBP	10.42	□□□□□ -0.74
MRP20	YDR405W	ENO2	P00925	437 aa	Known RBP	10.41	□□□□□ -0.74
MRP20	YDR405W	HXT1	P32465	570 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	MFT1	P33441	392 aa	Known RBP	10.41	□□□□□ -0.74
MRP20	YDR405W	HSL7	P38274	827 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	NEM1	P38757	446 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	PMC1	P38929	1173 aa	Predicted RBP	10.41	□□□□□ -0.74
MRP20	YDR405W	SAP185	P40856	1058 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	MRX6	P48564	524 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	PEX31	P53203	462 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	BIO5	P53744	561 aa	Known RBP	10.41	□□□□□ -0.74
MRP20	YDR405W	IMP4	P53941	290 aa	Known RBP	10.41	□□□□□ -0.74
MRP20	YDR405W	ATG16	Q03818	150 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.41	□□□□□ -0.74	RIP-Chip
MRP20	YDR405W	LCB4	Q12246	624 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	MPD2	Q99316	277 aa		10.41	□□□□□ -0.74
MRP20	YDR405W	SEC23	P15303	768 aa	Known RBP	10.4	□□□□□ -0.74
MRP20	YDR405W	NCL1	P38205	684 aa	Known RBP	10.4	□□□□□ -0.74
MRP20	YDR405W	SWC5	P38326	303 aa		10.4	□□□□□ -0.74
MRP20	YDR405W	TMN3	P40071	706 aa		10.4	□□□□□ -0.74
MRP20	YDR405W	UFE1	P41834	346 aa		10.4	□□□□□ -0.74
MRP20	YDR405W	YNL247W	P53852	767 aa	Known RBP	10.4	□□□□□ -0.74
MRP20	YDR405W	YPL014W	Q02606	381 aa		10.4	□□□□□ -0.74
MRP20	YDR405W	TMN2	Q04562	672 aa		10.4	□□□□□ -0.74
MRP20	YDR405W	FLC1	Q08967	793 aa		10.4	□□□□□ -0.74
MRP20	YDR405W	KAR3	P17119	729 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	DSF2	P38213	736 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	SET5	P38890	526 aa	Known RBP	10.39	□□□□□ -0.75
MRP20	YDR405W	TMA108	P40462	946 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	CEP3	P40969	608 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	RTT101	P47050	842 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	RSM26	P47141	266 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	YHM2	Q04013	314 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	SEG1	Q04279	960 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	ECM38	Q05902	660 aa	Predicted RBP	10.39	□□□□□ -0.75
MRP20	YDR405W	AAD4	Q07747	329 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	YRR1	Q12172	810 aa		10.39	□□□□□ -0.75
MRP20	YDR405W	RPS14A	P06367	137 aa	Known RBP	10.38	□□□□□ -0.75
MRP20	YDR405W	SIR1	P21691	654 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	TRX1	P22217	103 aa	Known RBP	10.38	□□□□□ -0.75
MRP20	YDR405W	RRP43	P25359	394 aa	Predicted RBP	10.38	□□□□□ -0.75
MRP20	YDR405W	DBF4	P32325	704 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	SGE1	P33335	543 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	SEG2	P34250	1132 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	HIS2	P38635	335 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	ARP1	P38696	384 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	RPS14B	P39516	138 aa	Known RBP	10.38	□□□□□ -0.75
MRP20	YDR405W	PRM9	P39551	298 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	YIL054W	P40524	105 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	SND1	Q04007	877 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	SIL1	Q08199	421 aa		10.38	□□□□□ -0.75
MRP20	YDR405W	FUS1	P11710	512 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	RAD57	P25301	460 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	YIH1	P25637	258 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	MCX1	P38323	520 aa	Predicted RBP	10.37	□□□□□ -0.75
MRP20	YDR405W	TCD1	P38756	429 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	ERP2	P39704	215 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	YER189W	P40104	122 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	ASG1	P40467	964 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	YJR079W	P47126	109 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	10.37	□□□□□ -0.75	not detected
MRP20	YDR405W	YGR283C	P53336	341 aa	Predicted RBP	10.37	□□□□□ -0.75
MRP20	YDR405W	PIR3	Q03180	325 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	GYL1	Q04322	720 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	SOV1	Q04748	898 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	RTN1	Q04947	295 aa	Known RBP	10.37	□□□□□ -0.75
MRP20	YDR405W	THI21	Q08975	551 aa		10.37	□□□□□ -0.75
MRP20	YDR405W	ERG11	P10614	530 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	REV1	P12689	985 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	GPI10	P30777	616 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	EFM4	P40516	257 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	CHS6	P40955	746 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	KAP114	P53067	1004 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	BTN2	P53286	410 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	COQ6	P53318	479 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	NGL3	Q03210	505 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	IVY1	Q04934	453 aa		10.36	□□□□□ -0.75
MRP20	YDR405W	SRB4	P32569	687 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	PCH2	P38126	564 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	KTR4	P38131	464 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	MED6	P38782	295 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	LAM1	P38851	1228 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	DOT6	P40059	670 aa	Known RBP	10.35	□□□□□ -0.75
MRP20	YDR405W	KTR6	P54070	446 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	CDC55	Q00362	526 aa		10.35	□□□□□ -0.75
MRP20	YDR405W	RKM2	Q03942	479 aa		10.35	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 134.7 ms