RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W PRM2P40534 656 aa5.31□□□□□ -1.56
SHR3YDL212W SPC98P53540 846 aa5.31□□□□□ -1.56
SHR3YDL212W TUB1P09733 447 aaKnown RBP5.3□□□□□ -1.56
SHR3YDL212W STE12P13574 688 aa5.3□□□□□ -1.56
SHR3YDL212W KCC4P25389 1037 aa5.3□□□□□ -1.56
SHR3YDL212W NTH1P32356 751 aa5.3□□□□□ -1.56
SHR3YDL212W MF(ALPHA)2P32435 120 aa5.3□□□□□ -1.56
SHR3YDL212W GRX4P32642 244 aa5.3□□□□□ -1.56
SHR3YDL212W FTR1P40088 404 aa5.3□□□□□ -1.56
SHR3YDL212W APM1Q00776 475 aaPredicted RBP5.3□□□□□ -1.56
SHR3YDL212W NSE5Q03718 556 aa5.3□□□□□ -1.56
SHR3YDL212W SPO11P23179 398 aa5.29□□□□□ -1.56
SHR3YDL212W HXT4P32467 576 aa5.29□□□□□ -1.56
SHR3YDL212W APL3P38065 1025 aa5.29□□□□□ -1.56
SHR3YDL212W GPP2P40106 250 aaKnown RBP5.29□□□□□ -1.56
SHR3YDL212W PMT6P42934 759 aa5.29□□□□□ -1.56
SHR3YDL212W FDC1Q03034 503 aa5.29□□□□□ -1.56
SHR3YDL212W YML122CQ03207 126 aa5.29□□□□□ -1.56
SHR3YDL212W PPN1Q04119 674 aa5.29□□□□□ -1.56
SHR3YDL212W STE4P18851 423 aa5.28□□□□□ -1.56
SHR3YDL212W ACO1P19414 778 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SHR3YDL212W EUG1P32474 517 aa5.28□□□□□ -1.56
SHR3YDL212W YDL183CP48569 320 aa5.28□□□□□ -1.56
SHR3YDL212W YGL081WP53156 320 aa5.28□□□□□ -1.56
SHR3YDL212W YDR179W-AQ03983 463 aa5.28□□□□□ -1.56
SHR3YDL212W UFO1Q04511 668 aa5.28□□□□□ -1.56
SHR3YDL212W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
SHR3YDL212W MRPL7P36519 292 aa5.27□□□□□ -1.57
SHR3YDL212W EHT1P38295 451 aa5.27□□□□□ -1.57
SHR3YDL212W YHR033WP38690 423 aa5.27□□□□□ -1.57
SHR3YDL212W ASN1P49089 572 aaKnown RBP5.27□□□□□ -1.57
SHR3YDL212W NDJ1Q12366 352 aa5.27□□□□□ -1.57
SHR3YDL212W RPN13O13563 156 aa5.26□□□□□ -1.57
SHR3YDL212W DUG1P43616 481 aaKnown RBP5.26□□□□□ -1.57
SHR3YDL212W NIT2P47016 307 aa5.26□□□□□ -1.57
SHR3YDL212W YJR120WP47157 116 aa5.26□□□□□ -1.57
SHR3YDL212W IMO32P53219 342 aa5.26□□□□□ -1.57
SHR3YDL212W YGR054WP53235 642 aaKnown RBP5.26□□□□□ -1.57
SHR3YDL212W HLR1Q04429 423 aa5.26□□□□□ -1.57
SHR3YDL212W NGL1Q08213 363 aaKnown RBP5.26□□□□□ -1.57
SHR3YDL212W YPR027CQ12079 277 aa5.26□□□□□ -1.57
SHR3YDL212W PMC1P38929 1173 aaPredicted RBP5.25□□□□□ -1.57
SHR3YDL212W PAC2P39937 518 aa5.25□□□□□ -1.57
SHR3YDL212W RNR4P49723 345 aaKnown RBP5.25□□□□□ -1.57
SHR3YDL212W MRK1P50873 501 aa5.25□□□□□ -1.57
SHR3YDL212W TRS23Q03784 219 aa5.25□□□□□ -1.57
SHR3YDL212W YCG1Q06680 1035 aa5.25□□□□□ -1.57
SHR3YDL212W TMA17Q12513 150 aa5.25□□□□□ -1.57
SHR3YDL212W RMP1Q12530 201 aa5.25□□□□□ -1.57
SHR3YDL212W HMG2P12684 1045 aa5.24□□□□□ -1.57
SHR3YDL212W PPE1P38796 400 aa5.24□□□□□ -1.57
SHR3YDL212W EFR3Q03653 782 aaKnown RBP5.24□□□□□ -1.57
SHR3YDL212W SKY1Q03656 742 aa5.24□□□□□ -1.57
SHR3YDL212W MDM20Q12387 796 aaKnown RBP5.24□□□□□ -1.57
SHR3YDL212W TPK2P06245 380 aa5.23□□□□□ -1.57
SHR3YDL212W ILV6P25605 309 aaKnown RBP5.23□□□□□ -1.57
SHR3YDL212W DGR2P32330 852 aa5.23□□□□□ -1.57
SHR3YDL212W YMC1P32331 307 aa5.23□□□□□ -1.57
SHR3YDL212W RMA1P36001 430 aaKnown RBP5.23□□□□□ -1.57
SHR3YDL212W ENP1P38333 483 aaKnown RBP5.23□□□□□ -1.57
SHR3YDL212W NGL2Q03264 515 aaKnown RBP5.23□□□□□ -1.57
SHR3YDL212W AIM44Q99299 758 aa5.23□□□□□ -1.57
SHR3YDL212W LEU2P04173 364 aaPredicted RBP5.22□□□□□ -1.57
SHR3YDL212W TSR4P25040 408 aa5.22□□□□□ -1.57
SHR3YDL212W YBR071WP38243 211 aa5.22□□□□□ -1.57
SHR3YDL212W YIP4P53093 235 aa5.22□□□□□ -1.57
SHR3YDL212W SAT4P25333 603 aaKnown RBP5.21□□□□□ -1.58
SHR3YDL212W IRC5P43610 853 aa5.21□□□□□ -1.58
SHR3YDL212W ENP2P48234 707 aaKnown RBP5.21□□□□□ -1.58
SHR3YDL212W MFM1Q02783 413 aa5.21□□□□□ -1.58
SHR3YDL212W ARR3Q06598 404 aa5.21□□□□□ -1.58
SHR3YDL212W OSW1Q08692 278 aa5.21□□□□□ -1.58
SHR3YDL212W TRE2Q08693 809 aa5.21□□□□□ -1.58
SHR3YDL212W AEP2P22136 580 aa5.2□□□□□ -1.58
SHR3YDL212W RPA135P22138 1203 aaKnown RBP5.2□□□□□ -1.58
SHR3YDL212W UGP1P32861 499 aaKnown RBP5.2□□□□□ -1.58
SHR3YDL212W EAF5P39995 279 aa5.2□□□□□ -1.58
SHR3YDL212W LRO1P40345 661 aa5.2□□□□□ -1.58
SHR3YDL212W YGL117WP53133 265 aa5.2□□□□□ -1.58
SHR3YDL212W COG6P53959 839 aa5.2□□□□□ -1.58
SHR3YDL212W DAK1P54838 584 aaKnown RBP5.2□□□□□ -1.58
SHR3YDL212W ARG7Q04728 441 aa5.2□□□□□ -1.58
SHR3YDL212W AIM41Q12032 185 aa5.2□□□□□ -1.58
SHR3YDL212W YEL076C-AP0CX16 216 aa5.19□□□□□ -1.58
SHR3YDL212W YLR464WP0CX17 216 aa5.19□□□□□ -1.58
SHR3YDL212W COX11P19516 300 aaKnown RBP5.19□□□□□ -1.58
SHR3YDL212W HOP1P20050 605 aa5.19□□□□□ -1.58
SHR3YDL212W YEL076CP39971 216 aa5.19□□□□□ -1.58
SHR3YDL212W PEF1P53238 335 aa5.19□□□□□ -1.58
SHR3YDL212W RPS15Q01855 142 aaKnown RBP5.19□□□□□ -1.58
SHR3YDL212W COQ11Q05892 277 aa5.19□□□□□ -1.58
SHR3YDL212W ECM38Q05902 660 aaPredicted RBP5.19□□□□□ -1.58
SHR3YDL212W THI7Q05998 598 aa5.19□□□□□ -1.58
SHR3YDL212W ULA1Q12059 462 aa5.19□□□□□ -1.58
SHR3YDL212W YNL162W-AQ3E7A8 72 aa5.19□□□□□ -1.58
SHR3YDL212W VPS34P22543 875 aa5.18□□□□□ -1.58
SHR3YDL212W CNE1P27825 502 aa5.18□□□□□ -1.58
SHR3YDL212W HEM12P32347 362 aaPredicted RBP5.18□□□□□ -1.58
SHR3YDL212W SRP68P38687 599 aaKnown RBP5.18□□□□□ -1.58
SHR3YDL212W PEA2P40091 420 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms