RNA–Protein interactions for RNA: YDL143W

CCT4, Transcript of Subunit of the cytosolic chaperonin Cct ring complex, yeast

Gene CCT4, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCT4	YDL143W	PRK1	P40494	810 aa		11.26	□□□□□ -0.61
CCT4	YDL143W	YGR283C	P53336	341 aa	Predicted RBP	11.26	□□□□□ -0.61
CCT4	YDL143W	YNL034W	P53963	612 aa		11.26	□□□□□ -0.61
CCT4	YDL143W	YNL018C	P53976	612 aa		11.26	□□□□□ -0.61
CCT4	YDL143W	CEG1	Q01159	459 aa	Predicted RBP	11.26	□□□□□ -0.61
CCT4	YDL143W	RRB1	Q04225	511 aa	Known RBP	11.26	□□□□□ -0.61
CCT4	YDL143W	VTI1	Q04338	217 aa		11.26	□□□□□ -0.61
CCT4	YDL143W	HRD3	Q05787	833 aa		11.26	□□□□□ -0.61
CCT4	YDL143W	TUB3	P09734	445 aa	Known RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	GCG1	P32656	232 aa	Known RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	TSA1	P34760	196 aa	Known RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	SAK1	P38990	1142 aa		11.25	□□□□□ -0.61
CCT4	YDL143W	BFA1	P47113	574 aa		11.25	□□□□□ -0.61
CCT4	YDL143W	RIM8	P53179	542 aa		11.25	□□□□□ -0.61
CCT4	YDL143W	YNL247W	P53852	767 aa	Known RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	YNL040W	P53960	456 aa	Predicted RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	MTD1	Q02046	320 aa	Known RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	MTG1	Q03151	367 aa	Predicted RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	RKM2	Q03942	479 aa		11.25	□□□□□ -0.61
CCT4	YDL143W	KAP95	Q06142	861 aa	Known RBP	11.25	□□□□□ -0.61
CCT4	YDL143W	YPK1	P12688	680 aa	Known RBP	11.24	□□□□□ -0.61
CCT4	YDL143W	RGR1	P19263	1082 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	SFL1	P20134	766 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	PDE1	P22434	369 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	CNS1	P33313	385 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	RRP1	P35178	278 aa	Predicted RBP	11.24	□□□□□ -0.61
CCT4	YDL143W	PCA1	P38360	1216 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	YML6	P51998	286 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	YMR187C	Q03236	431 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	HER2	Q03557	464 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	TDA9	Q04545	1251 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	FMP25	Q08023	583 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	THI21	Q08975	551 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	PEX1	P24004	1043 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	DSS4	P32601	143 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	NMD3	P38861	518 aa	Known RBP	11.24	□□□□□ -0.61
CCT4	YDL143W	ERP2	P39704	215 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	TMA108	P40462	946 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	ECM22	Q05958	814 aa	Predicted RBP	11.24	□□□□□ -0.61
CCT4	YDL143W	THI7	Q05998	598 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	ATG23	Q06671	453 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	RMP1	Q12530	201 aa		11.24	□□□□□ -0.61
CCT4	YDL143W	SPE1	P08432	466 aa		11.23	□□□□□ -0.61
CCT4	YDL143W	SYN8	P31377	255 aa		11.23	□□□□□ -0.61
CCT4	YDL143W	CDC27	P38042	758 aa		11.23	□□□□□ -0.61
CCT4	YDL143W	MMS21	P38632	267 aa		11.23	□□□□□ -0.61
CCT4	YDL143W	SSP1	P38871	571 aa		11.23	□□□□□ -0.61
CCT4	YDL143W	PRP31	P49704	494 aa	Predicted RBP	11.23	□□□□□ -0.61
CCT4	YDL143W	GCN5	Q03330	439 aa		11.23	□□□□□ -0.61
CCT4	YDL143W	SPG3	Q04398	127 aa	Predicted RBP	11.23	□□□□□ -0.61
CCT4	YDL143W	MEI4	P29467	408 aa		11.22	□□□□□ -0.61
CCT4	YDL143W	YKR051W	P36142	418 aa		11.22	□□□□□ -0.61
CCT4	YDL143W	YBR225W	P38321	900 aa		11.22	□□□□□ -0.61
CCT4	YDL143W	RIM4	P38741	713 aa		11.22	□□□□□ -0.61
CCT4	YDL143W	ARG2	P40360	574 aa		11.22	□□□□□ -0.61
CCT4	YDL143W	ARP7	Q12406	477 aa		11.22	□□□□□ -0.61
CCT4	YDL143W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	11.21	□□□□□ -0.61	not detected
CCT4	YDL143W	RAD10	P06838	210 aa		11.21	□□□□□ -0.61
CCT4	YDL143W	TIF5	P38431	405 aa	Known RBP	11.21	□□□□□ -0.61
CCT4	YDL143W	PEX31	P53203	462 aa		11.21	□□□□□ -0.61
CCT4	YDL143W	BET4	Q00618	327 aa		11.21	□□□□□ -0.61
CCT4	YDL143W	SND1	Q04007	877 aa		11.21	□□□□□ -0.61
CCT4	YDL143W	APL5	Q08951	932 aa	Known RBP	11.21	□□□□□ -0.61
CCT4	YDL143W	YDR018C	Q12185	396 aa		11.21	□□□□□ -0.61
CCT4	YDL143W	CCP1	P00431	361 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	RPO26	P20435	155 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	DAL1	P32375	460 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	GCD6	P32501	712 aa	Known RBP	11.2	□□□□□ -0.62
CCT4	YDL143W	FLC2	P39719	783 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	YMR134W	P40207	237 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	BTT1	P40314	149 aa	Predicted RBP	11.2	□□□□□ -0.62
CCT4	YDL143W	KTR6	P54070	446 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	AIM32	Q04689	311 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	PIG1	Q06216	648 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	AAD4	Q07747	329 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	NDJ1	Q12366	352 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	SLY1	P22213	666 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	UBC6	P33296	250 aa	Predicted RBP	11.2	□□□□□ -0.62
CCT4	YDL143W	MSG5	P38590	489 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	UTP8	P53276	713 aa	Known RBP	11.2	□□□□□ -0.62
CCT4	YDL143W	INA17	Q02888	182 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	PMT7	Q06644	662 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	YDL073W	Q07454	984 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	NUR1	Q12066	484 aa		11.2	□□□□□ -0.62
CCT4	YDL143W	CDC8	P00572	216 aa		11.19	□□□□□ -0.62
CCT4	YDL143W	RAD16	P31244	790 aa		11.19	□□□□□ -0.62
CCT4	YDL143W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	11.19	□□□□□ -0.62	not detected
CCT4	YDL143W	OLA1	P38219	394 aa	Known RBP	11.19	□□□□□ -0.62
CCT4	YDL143W	MKT1	P40850	830 aa	Known RBP	11.19	□□□□□ -0.62
CCT4	YDL143W	YJL045W	P47052	634 aa		11.19	□□□□□ -0.62
CCT4	YDL143W	UTP6	Q02354	440 aa	Known RBP	11.19	□□□□□ -0.62
CCT4	YDL143W	NOP6	Q07623	225 aa	Known RBP	11.19	□□□□□ -0.62
CCT4	YDL143W	SPE3	Q12074	293 aa	Known RBP	11.19	□□□□□ -0.62
CCT4	YDL143W	RIO1	Q12196	484 aa	Known RBP	11.19	□□□□□ -0.62
CCT4	YDL143W	IZH4	Q99393	312 aa		11.19	□□□□□ -0.62
CCT4	YDL143W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	11.18	□□□□□ -0.62	not detected
CCT4	YDL143W	YCR015C	P25616	317 aa		11.18	□□□□□ -0.62
CCT4	YDL143W	YIH1	P25637	258 aa		11.18	□□□□□ -0.62
CCT4	YDL143W	HSP78	P33416	811 aa		11.18	□□□□□ -0.62
CCT4	YDL143W	SAF1	P38352	637 aa		11.18	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms