RNA–Protein interactions for RNA: YDL002C

NHP10, Transcript of Non-essential INO80 chromatin remodeling complex subunit, yeast

Gene NHP10, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP10	YDL002C	DAL3	P32459	195 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	SEC6	P32844	805 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	TFC4	P33339	1025 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	MNN4	P36044	1178 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	SIC1	P38634	284 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	UBC11	P52492	156 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	YNL034W	P53963	612 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	YNL018C	P53976	612 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	SMX3	P54999	86 aa	Predicted RBP	4.64	□□□□□ -1.67
NHP10	YDL002C	SND1	Q04007	877 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	YOR378W	Q08902	515 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	HFI1	Q12060	488 aa		4.64	□□□□□ -1.67
NHP10	YDL002C	SPO11	P23179	398 aa		4.63	□□□□□ -1.67
NHP10	YDL002C	YJR039W	P47107	1121 aa		4.63	□□□□□ -1.67
NHP10	YDL002C	MTR3	P48240	250 aa	Predicted RBP	4.63	□□□□□ -1.67
NHP10	YDL002C	APM1	Q00776	475 aa	Predicted RBP	4.63	□□□□□ -1.67
NHP10	YDL002C	SLX4	Q12098	748 aa		4.63	□□□□□ -1.67
NHP10	YDL002C	ATG11	Q12527	1178 aa		4.63	□□□□□ -1.67
NHP10	YDL002C	RPS21B	Q3E754	87 aa	Known RBP	4.63	□□□□□ -1.67
NHP10	YDL002C	TOP1	P04786	769 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	RPS21A	P0C0V8	87 aa	Known RBP	4.62	□□□□□ -1.67
NHP10	YDL002C	HIR1	P32479	840 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	OAF3	P36023	863 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	YBR259W	P38338	688 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	MIP6	P38760	659 aa	Known RBP	4.62	□□□□□ -1.67
NHP10	YDL002C	SSZ1	P38788	538 aa	Known RBP	4.62	□□□□□ -1.67
NHP10	YDL002C	REV7	P38927	245 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	BEM4	P39011	633 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	NUG1	P40010	520 aa	Known RBP	4.62	□□□□□ -1.67
NHP10	YDL002C	RMP1	Q12530	201 aa		4.62	□□□□□ -1.67
NHP10	YDL002C	ATP4	P05626	244 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	SWI6	P09959	803 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	HEM12	P32347	362 aa	Predicted RBP	4.61	□□□□□ -1.67
NHP10	YDL002C	PEA2	P40091	420 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	YAP1802	P53309	568 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	BRE5	P53741	515 aa	Known RBP	4.61	□□□□□ -1.67
NHP10	YDL002C	LEE1	Q02799	301 aa	Known RBP	4.61	□□□□□ -1.67
NHP10	YDL002C	GAD1	Q04792	585 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	YAP7	Q08182	245 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	TAF3	Q12297	353 aa		4.61	□□□□□ -1.67
NHP10	YDL002C	SER1	P33330	395 aa	Known RBP	4.6	□□□□□ -1.67
NHP10	YDL002C	MAL31	P38156	614 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	FAT1	P38225	669 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	BIT2	P38346	545 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	NDC80	P40460	691 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	CCT7	P42943	550 aa	Known RBP	4.6	□□□□□ -1.67
NHP10	YDL002C	SKY1	Q03656	742 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	YHM2	Q04013	314 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	ICT1	Q12385	394 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	MPD2	Q99316	277 aa		4.6	□□□□□ -1.67
NHP10	YDL002C	HAP1	P0CE41	1502 aa		4.59	□□□□□ -1.67
NHP10	YDL002C	SST2	P11972	698 aa	Known RBP	4.59	□□□□□ -1.67
NHP10	YDL002C	AKL1	P38080	1108 aa	Known RBP	4.59	□□□□□ -1.67
NHP10	YDL002C	GID8	P40208	455 aa		4.59	□□□□□ -1.67
NHP10	YDL002C	BAP3	P41815	604 aa		4.59	□□□□□ -1.67
NHP10	YDL002C	TEX1	P53851	422 aa	Known RBP	4.59	□□□□□ -1.67
NHP10	YDL002C	PTA1	Q01329	785 aa	Predicted RBP	4.59	□□□□□ -1.67
NHP10	YDL002C	COX11	P19516	300 aa	Known RBP	4.58	□□□□□ -1.68
NHP10	YDL002C	SEC65	P29478	273 aa		4.58	□□□□□ -1.68
NHP10	YDL002C	EMP70	P32802	667 aa		4.58	□□□□□ -1.68
NHP10	YDL002C	YBP2	P53169	641 aa		4.58	□□□□□ -1.68
NHP10	YDL002C	PHM6	Q05637	104 aa		4.58	□□□□□ -1.68
NHP10	YDL002C	YPR027C	Q12079	277 aa		4.58	□□□□□ -1.68
NHP10	YDL002C	PIF1	P07271	859 aa		4.57	□□□□□ -1.68
NHP10	YDL002C	PMC1	P38929	1173 aa	Predicted RBP	4.57	□□□□□ -1.68
NHP10	YDL002C	CCT3	P39077	534 aa	Known RBP	4.57	□□□□□ -1.68
NHP10	YDL002C	EMP65	P40085	556 aa		4.57	□□□□□ -1.68
NHP10	YDL002C	CTR1	P49573	406 aa		4.57	□□□□□ -1.68
NHP10	YDL002C	YKL033W-A	Q86ZR7	236 aa		4.57	□□□□□ -1.68
NHP10	YDL002C	PYC1	P11154	1178 aa	Known RBP	4.56	□□□□□ -1.68
NHP10	YDL002C	KAR1	P11927	433 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	ATP12	P22135	325 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	GLG1	P36143	616 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	TRZ1	P36159	838 aa	Predicted RBP	4.56	□□□□□ -1.68
NHP10	YDL002C	RRP8	P38961	392 aa	Known RBP	4.56	□□□□□ -1.68
NHP10	YDL002C	YEL020C	P39994	560 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	SET2	P46995	733 aa	Known RBP	4.56	□□□□□ -1.68
NHP10	YDL002C	GLO1	P50107	326 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	PAN2	P53010	1115 aa	Predicted RBP	4.56	□□□□□ -1.68
NHP10	YDL002C	SPC105	P53148	917 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	ORC4	P54791	529 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	MET14	Q02196	202 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	YLR407W	Q06070	228 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	PEX15	Q08215	383 aa		4.56	□□□□□ -1.68
NHP10	YDL002C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
NHP10	YDL002C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.55	□□□□□ -1.68
NHP10	YDL002C	RPN13	O13563	156 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	SIR3	P06701	978 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	CDC26	P14724	124 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	MVD1	P32377	396 aa	Known RBP	4.55	□□□□□ -1.68
NHP10	YDL002C	TMT1	P32643	299 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	YKU70	P32807	602 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	NIC96	P34077	839 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	SFB3	P38810	929 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	YHR202W	P38887	602 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	ECM1	P39715	212 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	ARG2	P40360	574 aa		4.55	□□□□□ -1.68
NHP10	YDL002C	RSC8	P43609	557 aa	Known RBP	4.55	□□□□□ -1.68
NHP10	YDL002C	PRP31	P49704	494 aa	Predicted RBP	4.55	□□□□□ -1.68
NHP10	YDL002C	PIP2	P52960	996 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms