RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	GFA1	P14742	717 aa	Known RBP	4.08	□□□□□ -1.76
YCL020W	YCL020W	GMH1	P36125	273 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	FLO10	P36170	1169 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	YBR071W	P38243	211 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	EAF5	P39995	279 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	YGL081W	P53156	320 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	FOL1	P53848	824 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	COG6	P53959	839 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	TRS23	Q03784	219 aa		4.08	□□□□□ -1.76
YCL020W	YCL020W	CLF1	Q12309	687 aa	Predicted RBP	4.08	□□□□□ -1.76
YCL020W	YCL020W	PRP22	P24384	1145 aa	Known RBP	4.07	□□□□□ -1.76
YCL020W	YCL020W	MF(ALPHA)2	P32435	120 aa		4.07	□□□□□ -1.76
YCL020W	YCL020W	RMA1	P36001	430 aa	Known RBP	4.07	□□□□□ -1.76
YCL020W	YCL020W	YDL183C	P48569	320 aa		4.07	□□□□□ -1.76
YCL020W	YCL020W	RNR4	P49723	345 aa	Known RBP	4.07	□□□□□ -1.76
YCL020W	YCL020W	SPO1	P53541	631 aa		4.07	□□□□□ -1.76
YCL020W	YCL020W	SKY1	Q03656	742 aa		4.07	□□□□□ -1.76
YCL020W	YCL020W	YSH1	Q06224	779 aa	Predicted RBP	4.07	□□□□□ -1.76
YCL020W	YCL020W	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
YCL020W	YCL020W	PHO5	P00635	467 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	COX11	P19516	300 aa	Known RBP	4.06	□□□□□ -1.76
YCL020W	YCL020W	AEP2	P22136	580 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	DMC1	P25453	334 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	DGR2	P32330	852 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	YMC2	P38087	329 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	PPE1	P38796	400 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	RIX1	P38883	763 aa	Predicted RBP	4.06	□□□□□ -1.76
YCL020W	YCL020W	PMT6	P42934	759 aa		4.06	□□□□□ -1.76
YCL020W	YCL020W	DUG1	P43616	481 aa	Known RBP	4.06	□□□□□ -1.76
YCL020W	YCL020W	LGE1	Q02796	332 aa	Known RBP	4.06	□□□□□ -1.76
YCL020W	YCL020W	ABF1	P14164	731 aa		4.05	□□□□□ -1.76
YCL020W	YCL020W	PLC1	P32383	869 aa		4.05	□□□□□ -1.76
YCL020W	YCL020W	MRPL7	P36519	292 aa		4.05	□□□□□ -1.76
YCL020W	YCL020W	SPC105	P53148	917 aa		4.05	□□□□□ -1.76
YCL020W	YCL020W	YGR054W	P53235	642 aa	Known RBP	4.05	□□□□□ -1.76
YCL020W	YCL020W	YCG1	Q06680	1035 aa		4.05	□□□□□ -1.76
YCL020W	YCL020W	CWC2	Q12046	339 aa	Predicted RBP	4.05	□□□□□ -1.76
YCL020W	YCL020W	YEL076C-A	P0CX16	216 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	YLR464W	P0CX17	216 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	HMG2	P12684	1045 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	STE4	P18851	423 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	ADY2	P25613	283 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	HEM12	P32347	362 aa	Predicted RBP	4.04	□□□□□ -1.76
YCL020W	YCL020W	NTH1	P32356	751 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	APL3	P38065	1025 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	YEL076C	P39971	216 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	ASN1	P49089	572 aa	Known RBP	4.04	□□□□□ -1.76
YCL020W	YCL020W	NSE5	Q03718	556 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	PPN1	Q04119	674 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	YOR378W	Q08902	515 aa		4.04	□□□□□ -1.76
YCL020W	YCL020W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
YCL020W	YCL020W	KCC4	P25389	1037 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	MUP3	P38734	546 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	PMC1	P38929	1173 aa	Predicted RBP	4.03	□□□□□ -1.76
YCL020W	YCL020W	YEL020C	P39994	560 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	PEA2	P40091	420 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	FDC1	Q03034	503 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	YDR179W-A	Q03983	463 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	UFO1	Q04511	668 aa		4.03	□□□□□ -1.76
YCL020W	YCL020W	MDM20	Q12387	796 aa	Known RBP	4.03	□□□□□ -1.76
YCL020W	YCL020W	SSB1	P11484	613 aa	Known RBP	4.02	□□□□□ -1.77
YCL020W	YCL020W	SPO11	P23179	398 aa		4.02	□□□□□ -1.77
YCL020W	YCL020W	SSB2	P40150	613 aa	Known RBP	4.02	□□□□□ -1.77
YCL020W	YCL020W	YIL166C	P40445	542 aa		4.02	□□□□□ -1.77
YCL020W	YCL020W	IRC5	P43610	853 aa		4.02	□□□□□ -1.77
YCL020W	YCL020W	YIP4	P53093	235 aa		4.02	□□□□□ -1.77
YCL020W	YCL020W	PEX14	P53112	341 aa		4.02	□□□□□ -1.77
YCL020W	YCL020W	MFM1	Q02783	413 aa		4.02	□□□□□ -1.77
YCL020W	YCL020W	EFR3	Q03653	782 aa	Known RBP	4.02	□□□□□ -1.77
YCL020W	YCL020W	RTK1	Q12100	620 aa	Predicted RBP	4.02	□□□□□ -1.77
YCL020W	YCL020W	PCK1	P10963	549 aa		4.01	□□□□□ -1.77
YCL020W	YCL020W	YMC1	P32331	307 aa		4.01	□□□□□ -1.77
YCL020W	YCL020W	SQS1	P53866	767 aa	Known RBP	4.01	□□□□□ -1.77
YCL020W	YCL020W	ARO10	Q06408	635 aa		4.01	□□□□□ -1.77
YCL020W	YCL020W	BMS1	Q08965	1183 aa	Known RBP	4.01	□□□□□ -1.77
YCL020W	YCL020W	ATF1	P40353	525 aa		4	□□□□□ -1.77
YCL020W	YCL020W	MTD1	Q02046	320 aa	Known RBP	4	□□□□□ -1.77
YCL020W	YCL020W	ARR3	Q06598	404 aa		4	□□□□□ -1.77
YCL020W	YCL020W	AIM41	Q12032	185 aa		4	□□□□□ -1.77
YCL020W	YCL020W	TUB1	P09733	447 aa	Known RBP	3.99	□□□□□ -1.77
YCL020W	YCL020W	KAR1	P11927	433 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	RPA135	P22138	1203 aa	Known RBP	3.99	□□□□□ -1.77
YCL020W	YCL020W	ARG1	P22768	420 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	YPT53	P36019	220 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	LRO1	P40345	661 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	YNL034W	P53963	612 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	YNL018C	P53976	612 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	APM1	Q00776	475 aa	Predicted RBP	3.99	□□□□□ -1.77
YCL020W	YCL020W	NGL2	Q03264	515 aa	Known RBP	3.99	□□□□□ -1.77
YCL020W	YCL020W	PHM6	Q05637	104 aa		3.99	□□□□□ -1.77
YCL020W	YCL020W	TPK2	P06245	380 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	CUE2	P36075	443 aa	Known RBP	3.98	□□□□□ -1.77
YCL020W	YCL020W	PAF1	P38351	445 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	SRP68	P38687	599 aa	Known RBP	3.98	□□□□□ -1.77
YCL020W	YCL020W	STB5	P38699	743 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	YEL025C	P39991	1188 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	MNT2	P53059	558 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	SLD3	P53135	668 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	PEF1	P53238	335 aa		3.98	□□□□□ -1.77
YCL020W	YCL020W	HLR1	Q04429	423 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms