RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS20, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS20	YBR254C	NOP15	P53927	220 aa	Predicted RBP	4.15	□□□□□ -1.75
TRS20	YBR254C	DAK1	P54838	584 aa	Known RBP	4.15	□□□□□ -1.75
TRS20	YBR254C	SEC5	P89102	971 aa		4.15	□□□□□ -1.75
TRS20	YBR254C	RPS21B	Q3E754	87 aa	Known RBP	4.15	□□□□□ -1.75
TRS20	YBR254C	AI5_ALPHA	Q9ZZX1	630 aa		4.15	□□□□□ -1.75
TRS20	YBR254C	RPS17A	P02407	136 aa	Known RBP	4.14	□□□□□ -1.75
TRS20	YBR254C	LEU2	P04173	364 aa	Predicted RBP	4.14	□□□□□ -1.75
TRS20	YBR254C	RPS17B	P14127	136 aa	Known RBP	4.14	□□□□□ -1.75
TRS20	YBR254C	MBR1	P23493	339 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	PRE4	P30657	266 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	HOT13	P36078	116 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	CRG1	P38892	291 aa	RIP-Chip data	4.14	□□□□□ -1.75	not detected
TRS20	YBR254C	LTP1	P40347	161 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	CCT5	P40413	562 aa	Known RBP	4.14	□□□□□ -1.75
TRS20	YBR254C	NET1	P47035	1189 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	SPO1	P53541	631 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	CPR8	P53728	308 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	TIM50	Q02776	476 aa		4.14	□□□□□ -1.75
TRS20	YBR254C	TUP1	P16649	713 aa		4.13	□□□□□ -1.75
TRS20	YBR254C	PRP19	P32523	503 aa	Known RBP	4.13	□□□□□ -1.75
TRS20	YBR254C	CDS1	P38221	457 aa		4.13	□□□□□ -1.75
TRS20	YBR254C	PPE1	P38796	400 aa		4.13	□□□□□ -1.75
TRS20	YBR254C	DNM1	P54861	757 aa		4.13	□□□□□ -1.75
TRS20	YBR254C	SEC65	P29478	273 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	MRPL7	P36519	292 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	HXT6	P39003	570 aa	Known RBP	4.12	□□□□□ -1.75
TRS20	YBR254C	HXT7	P39004	570 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	DUN1	P39009	513 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	MNN1	P39106	762 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	FTR1	P40088	404 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	IES1	P43579	692 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	YGR153W	P48238	217 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	TAF4	P50105	388 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	YIP4	P53093	235 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	FDC1	Q03034	503 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	EFR3	Q03653	782 aa	Known RBP	4.12	□□□□□ -1.75
TRS20	YBR254C	PPN1	Q04119	674 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	ADR1	P07248	1323 aa		4.12	□□□□□ -1.75
TRS20	YBR254C	GLN4	P13188	809 aa	Known RBP	4.11	□□□□□ -1.75
TRS20	YBR254C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
TRS20	YBR254C	RIM4	P38741	713 aa		4.11	□□□□□ -1.75
TRS20	YBR254C	THI6	P41835	540 aa		4.11	□□□□□ -1.75
TRS20	YBR254C	YGR054W	P53235	642 aa	Known RBP	4.11	□□□□□ -1.75
TRS20	YBR254C	ECM9	Q02202	377 aa		4.11	□□□□□ -1.75
TRS20	YBR254C	MFM1	Q02783	413 aa		4.11	□□□□□ -1.75
TRS20	YBR254C	ZPS1	Q12512	249 aa		4.11	□□□□□ -1.75
TRS20	YBR254C	PMA2	P19657	947 aa		4.1	□□□□□ -1.75
TRS20	YBR254C	TYS1	P36421	394 aa	Known RBP	4.1	□□□□□ -1.75
TRS20	YBR254C	THI73	Q07904	523 aa		4.1	□□□□□ -1.75
TRS20	YBR254C	RGT2	Q12300	763 aa		4.1	□□□□□ -1.75
TRS20	YBR254C	CNE1	P27825	502 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	FAT1	P38225	669 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	PIH1	P38768	344 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	PRM2	P40534	656 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	HLJ1	P48353	224 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	YNL018C	P53976	612 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	MTQ2	Q03920	221 aa	Predicted RBP	4.09	□□□□□ -1.75
TRS20	YBR254C	FRE7	Q12333	620 aa		4.09	□□□□□ -1.75
TRS20	YBR254C	CPA2	P03965	1118 aa	Known RBP	4.08	□□□□□ -1.76
TRS20	YBR254C	RPL7A	P05737	244 aa	Known RBP	4.08	□□□□□ -1.76
TRS20	YBR254C	RPS21A	P0C0V8	87 aa	Known RBP	4.08	□□□□□ -1.76
TRS20	YBR254C	OAF3	P36023	863 aa		4.08	□□□□□ -1.76
TRS20	YBR254C	BUD17	P53727	317 aa		4.08	□□□□□ -1.76
TRS20	YBR254C	NSE5	Q03718	556 aa		4.08	□□□□□ -1.76
TRS20	YBR254C	YHM2	Q04013	314 aa		4.08	□□□□□ -1.76
TRS20	YBR254C	HLR1	Q04429	423 aa		4.08	□□□□□ -1.76
TRS20	YBR254C	HFI1	Q12060	488 aa		4.08	□□□□□ -1.76
TRS20	YBR254C	RPL7B	Q12213	244 aa	Known RBP	4.08	□□□□□ -1.76
TRS20	YBR254C	CDC26	P14724	124 aa		4.07	□□□□□ -1.76
TRS20	YBR254C	MTC7	P32633	139 aa		4.07	□□□□□ -1.76
TRS20	YBR254C	EHT1	P38295	451 aa		4.07	□□□□□ -1.76
TRS20	YBR254C	ULP2	P40537	1034 aa	Predicted RBP	4.07	□□□□□ -1.76
TRS20	YBR254C	CEF1	Q03654	590 aa	Predicted RBP	4.07	□□□□□ -1.76
TRS20	YBR254C	AQY1	P0CD91	305 aa		4.06	□□□□□ -1.76
TRS20	YBR254C	YHR033W	P38690	423 aa		4.06	□□□□□ -1.76
TRS20	YBR254C	VID28	P40547	921 aa		4.06	□□□□□ -1.76
TRS20	YBR254C	GZF3	P42944	551 aa	Known RBP	4.06	□□□□□ -1.76
TRS20	YBR254C	COQ6	P53318	479 aa		4.06	□□□□□ -1.76
TRS20	YBR254C	RPS15	Q01855	142 aa	Known RBP	4.06	□□□□□ -1.76
TRS20	YBR254C	YDL073W	Q07454	984 aa		4.06	□□□□□ -1.76
TRS20	YBR254C	YPL216W	Q08964	1102 aa		4.06	□□□□□ -1.76
TRS20	YBR254C	SEC3	P33332	1336 aa	Known RBP	4.05	□□□□□ -1.76
TRS20	YBR254C	OAF1	P39720	1047 aa	Predicted RBP	4.05	□□□□□ -1.76
TRS20	YBR254C	YEL025C	P39991	1188 aa		4.05	□□□□□ -1.76
TRS20	YBR254C	YDL183C	P48569	320 aa		4.05	□□□□□ -1.76
TRS20	YBR254C	ATP23	P53722	227 aa		4.05	□□□□□ -1.76
TRS20	YBR254C	MPS1	P54199	764 aa		4.05	□□□□□ -1.76
TRS20	YBR254C	STP1	Q00947	519 aa		4.05	□□□□□ -1.76
TRS20	YBR254C	YCG1	Q06680	1035 aa		4.05	□□□□□ -1.76
TRS20	YBR254C	HEM1	P09950	548 aa	Predicted RBP	4.04	□□□□□ -1.76
TRS20	YBR254C	HOP1	P20050	605 aa		4.04	□□□□□ -1.76
TRS20	YBR254C	MF(ALPHA)2	P32435	120 aa		4.04	□□□□□ -1.76
TRS20	YBR254C	DHR2	P36009	735 aa	Predicted RBP	4.04	□□□□□ -1.76
TRS20	YBR254C	ORM2	Q06144	216 aa		4.04	□□□□□ -1.76
TRS20	YBR254C	ARR3	Q06598	404 aa		4.04	□□□□□ -1.76
TRS20	YBR254C	YTM1	Q12024	460 aa	Predicted RBP	4.04	□□□□□ -1.76
TRS20	YBR254C	APM4	Q99186	491 aa		4.04	□□□□□ -1.76
TRS20	YBR254C	WHI2	P12611	486 aa		4.03	□□□□□ -1.76
TRS20	YBR254C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
TRS20	YBR254C	BEM3	P32873	1128 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms