RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C YEL057CP39983 233 aa6.12□□□□□ -1.43
SEC18YBR080C ARB1P40024 610 aaKnown RBP6.12□□□□□ -1.43
SEC18YBR080C EFM4P40516 257 aa6.12□□□□□ -1.43
SEC18YBR080C YSA1Q01976 231 aa6.12□□□□□ -1.43
SEC18YBR080C HAP5Q02516 242 aa6.12□□□□□ -1.43
SEC18YBR080C PUS5Q06244 254 aa6.12□□□□□ -1.43
SEC18YBR080C APL4Q12028 832 aa6.12□□□□□ -1.43
SEC18YBR080C PRP28P23394 588 aa6.11□□□□□ -1.43
SEC18YBR080C YCL002CP25565 263 aa6.11□□□□□ -1.43
SEC18YBR080C CAP1P28495 268 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C MGM1P32266 881 aa6.11□□□□□ -1.43
SEC18YBR080C SMI1P32566 505 aa6.11□□□□□ -1.43
SEC18YBR080C COY1P34237 679 aa6.11□□□□□ -1.43
SEC18YBR080C SAW1P39735 261 aa6.11□□□□□ -1.43
SEC18YBR080C CCT7P42943 550 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C SHE4P51534 789 aa6.11□□□□□ -1.43
SEC18YBR080C NUP84P52891 726 aa6.11□□□□□ -1.43
SEC18YBR080C YAP6Q03935 383 aa6.11□□□□□ -1.43
SEC18YBR080C MMR1Q06324 491 aa6.11□□□□□ -1.43
SEC18YBR080C CLP1Q08685 445 aaPredicted RBP6.11□□□□□ -1.43
SEC18YBR080C GCN4P03069 281 aa6.11□□□□□ -1.43
SEC18YBR080C CLB4P24871 460 aa6.11□□□□□ -1.43
SEC18YBR080C SPB1P25582 841 aaPredicted RBP6.11□□□□□ -1.43
SEC18YBR080C RPT5P33297 434 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C SUR1P33300 382 aa6.11□□□□□ -1.43
SEC18YBR080C HEL1P36113 551 aa6.11□□□□□ -1.43
SEC18YBR080C SRP68P38687 599 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C OTU2P38747 307 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C YNR065CP53751 1116 aa6.11□□□□□ -1.43
SEC18YBR080C RIA1P53893 1110 aa6.11□□□□□ -1.43
SEC18YBR080C TOF2Q02208 771 aa6.11□□□□□ -1.43
SEC18YBR080C RKM2Q03942 479 aa6.11□□□□□ -1.43
SEC18YBR080C LRS4Q04087 347 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C GET3Q12154 354 aaKnown RBP6.11□□□□□ -1.43
SEC18YBR080C Q0142Q9ZZW4 58 aa6.11□□□□□ -1.43
SEC18YBR080C PHO5P00635 467 aa6.1□□□□□ -1.43
SEC18YBR080C NOT3P06102 836 aaKnown RBP6.1□□□□□ -1.43
SEC18YBR080C URA7P28274 579 aaKnown RBP6.1□□□□□ -1.43
SEC18YBR080C MF(ALPHA)2P32435 120 aa6.1□□□□□ -1.43
SEC18YBR080C RPT3P33298 428 aaKnown RBP6.1□□□□□ -1.43
SEC18YBR080C SHU2P38957 223 aa6.1□□□□□ -1.43
SEC18YBR080C LYS9P38999 446 aa6.1□□□□□ -1.43
SEC18YBR080C VID28P40547 921 aa6.1□□□□□ -1.43
SEC18YBR080C ARF3P40994 183 aaRIP-Chip data6.1□□□□□ -1.43not detected
SEC18YBR080C LEM3P42838 414 aa6.1□□□□□ -1.43
SEC18YBR080C KEL2P50090 882 aa6.1□□□□□ -1.43
SEC18YBR080C ALT1P52893 592 aa6.1□□□□□ -1.43
SEC18YBR080C LSB1P53281 241 aa6.1□□□□□ -1.43
SEC18YBR080C GCR2Q01722 534 aa6.1□□□□□ -1.43
SEC18YBR080C SIR1P21691 654 aa6.1□□□□□ -1.43
SEC18YBR080C CWH43P25618 953 aa6.1□□□□□ -1.43
SEC18YBR080C WHI3P34761 661 aaKnown RBP6.1□□□□□ -1.43
SEC18YBR080C SWH1P35845 1188 aa6.1□□□□□ -1.43
SEC18YBR080C STB6P36085 766 aa6.1□□□□□ -1.43
SEC18YBR080C YBL028CP38202 106 aa6.1□□□□□ -1.43
SEC18YBR080C MSC7P38694 644 aa6.1□□□□□ -1.43
SEC18YBR080C YER034WP40022 185 aaKnown RBP6.1□□□□□ -1.43
SEC18YBR080C PSF2P40359 213 aa6.1□□□□□ -1.43
SEC18YBR080C CCM1P48237 864 aaPredicted RBP6.1□□□□□ -1.43
SEC18YBR080C BSC5P53755 489 aa6.1□□□□□ -1.43
SEC18YBR080C NMD4Q12129 218 aa6.1□□□□□ -1.43
SEC18YBR080C CTT1P06115 562 aa6.09□□□□□ -1.43
SEC18YBR080C VAS1P07806 1104 aaKnown RBP6.09□□□□□ -1.43
SEC18YBR080C POL3P15436 1097 aa6.09□□□□□ -1.43
SEC18YBR080C DIT1P21623 536 aa6.09□□□□□ -1.43
SEC18YBR080C TRK2P28584 889 aa6.09□□□□□ -1.43
SEC18YBR080C KIP1P28742 1111 aa6.09□□□□□ -1.43
SEC18YBR080C VPS17P32913 551 aa6.09□□□□□ -1.43
SEC18YBR080C TEF4P36008 412 aaKnown RBP6.09□□□□□ -1.43
SEC18YBR080C YJR124CP47159 448 aa6.09□□□□□ -1.43
SEC18YBR080C TCB2P48231 1178 aa6.09□□□□□ -1.43
SEC18YBR080C RRN5Q02983 363 aa6.09□□□□□ -1.43
SEC18YBR080C YDR514CQ04408 483 aa6.09□□□□□ -1.43
SEC18YBR080C DON1Q05610 365 aa6.09□□□□□ -1.43
SEC18YBR080C MCP2Q06567 569 aa6.09□□□□□ -1.43
SEC18YBR080C IWR1Q07532 353 aaPredicted RBP6.09□□□□□ -1.43
SEC18YBR080C PSF3Q12146 194 aa6.09□□□□□ -1.43
SEC18YBR080C DAP2P18962 818 aa6.09□□□□□ -1.44
SEC18YBR080C CLB1P24868 471 aa6.09□□□□□ -1.44
SEC18YBR080C PDC6P26263 563 aaKnown RBP6.09□□□□□ -1.44
SEC18YBR080C BCK2P33306 851 aa6.09□□□□□ -1.44
SEC18YBR080C POL12P38121 705 aaPredicted RBP6.09□□□□□ -1.44
SEC18YBR080C PPE1P38796 400 aa6.09□□□□□ -1.44
SEC18YBR080C UTP9P38882 575 aaKnown RBP6.09□□□□□ -1.44
SEC18YBR080C YEL025CP39991 1188 aa6.09□□□□□ -1.44
SEC18YBR080C YER156CP40093 338 aaKnown RBP6.09□□□□□ -1.44
SEC18YBR080C UBP7P40453 1071 aa6.09□□□□□ -1.44
SEC18YBR080C MKT1P40850 830 aaKnown RBP6.09□□□□□ -1.44
SEC18YBR080C SAP4P53036 818 aa6.09□□□□□ -1.44
SEC18YBR080C JJJ1P53863 590 aa6.09□□□□□ -1.44
SEC18YBR080C FCP1Q03254 732 aa6.09□□□□□ -1.44
SEC18YBR080C CWC21Q03375 135 aaKnown RBP6.09□□□□□ -1.44
SEC18YBR080C CTI6Q08923 506 aa6.09□□□□□ -1.44
SEC18YBR080C CHS5Q12114 671 aaKnown RBP6.09□□□□□ -1.44
SEC18YBR080C RSC6P25632 483 aa6.08□□□□□ -1.44
SEC18YBR080C SLA2P33338 968 aa6.08□□□□□ -1.44
SEC18YBR080C SSZ1P38788 538 aaKnown RBP6.08□□□□□ -1.44
SEC18YBR080C PKP1P40530 394 aa6.08□□□□□ -1.44
SEC18YBR080C MSN5P52918 1224 aa6.08□□□□□ -1.44
SEC18YBR080C NOP15P53927 220 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms