RNA–Protein interactions for RNA: YAL009W

SPO7, Transcript of Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, yeastyeast

Gene SPO7, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO7YAL009W YPT11P48559 417 aa6.3□□□□□ -1.4
SPO7YAL009W CEF1Q03654 590 aaPredicted RBP6.3□□□□□ -1.4
SPO7YAL009W TIF35Q04067 274 aaKnown RBP6.3□□□□□ -1.4
SPO7YAL009W HCR1Q05775 265 aaKnown RBP6.3□□□□□ -1.4
SPO7YAL009W SPP382Q06411 708 aaPredicted RBP6.3□□□□□ -1.4
SPO7YAL009W LEA1Q08963 238 aaPredicted RBP6.3□□□□□ -1.4
SPO7YAL009W YPR027CQ12079 277 aa6.3□□□□□ -1.4
SPO7YAL009W LSO1Q3E827 93 aa6.3□□□□□ -1.4
SPO7YAL009W RPL22AP05749 121 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W NAT1P12945 854 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W KGD2P19262 463 aaPredicted RBP6.29□□□□□ -1.4
SPO7YAL009W PUP3P25451 205 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W PEX34P25584 144 aa6.29□□□□□ -1.4
SPO7YAL009W COY1P34237 679 aa6.29□□□□□ -1.4
SPO7YAL009W FTR1P40088 404 aa6.29□□□□□ -1.4
SPO7YAL009W ZAP1P47043 880 aa6.29□□□□□ -1.4
SPO7YAL009W YGR237CP50089 785 aa6.29□□□□□ -1.4
SPO7YAL009W ALT1P52893 592 aa6.29□□□□□ -1.4
SPO7YAL009W ARI1P53111 347 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W BIO5P53744 561 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W RLP24Q07915 199 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W SLP1Q12232 587 aa6.29□□□□□ -1.4
SPO7YAL009W HRT3Q12347 344 aa6.29□□□□□ -1.4
SPO7YAL009W TY1A-NL1Q12391 440 aaKnown RBP6.29□□□□□ -1.4
SPO7YAL009W OM45P16547 393 aa6.28□□□□□ -1.4
SPO7YAL009W CDC42P19073 191 aa6.28□□□□□ -1.4
SPO7YAL009W RRT12P25381 491 aa6.28□□□□□ -1.4
SPO7YAL009W SWI3P32591 825 aa6.28□□□□□ -1.4
SPO7YAL009W SFA1P32771 386 aa6.28□□□□□ -1.4
SPO7YAL009W RAD55P38953 406 aa6.28□□□□□ -1.4
SPO7YAL009W CIR1P42940 261 aa6.28□□□□□ -1.4
SPO7YAL009W TAF1P46677 1066 aa6.28□□□□□ -1.4
SPO7YAL009W NOP13P53883 403 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SPO7YAL009W HER2Q03557 464 aa6.28□□□□□ -1.4
SPO7YAL009W IWR1Q07532 353 aaPredicted RBP6.28□□□□□ -1.4
SPO7YAL009W ABP140Q08641 628 aaKnown RBP6.28□□□□□ -1.4
SPO7YAL009W GIS3Q12418 502 aa6.28□□□□□ -1.4
SPO7YAL009W FMP27Q06179 2628 aa6.27□□□□□ -1.41
SPO7YAL009W FUR4P05316 633 aaKnown RBP6.27□□□□□ -1.41
SPO7YAL009W CDC11P32458 415 aa6.27□□□□□ -1.41
SPO7YAL009W CBF2P32504 956 aa6.27□□□□□ -1.41
SPO7YAL009W FRE1P32791 686 aa6.27□□□□□ -1.41
SPO7YAL009W YKL023WP36103 277 aaKnown RBP6.27□□□□□ -1.41
SPO7YAL009W ARP1P38696 384 aa6.27□□□□□ -1.41
SPO7YAL009W BCD1P38772 366 aa6.27□□□□□ -1.41
SPO7YAL009W SAH1P39954 449 aaKnown RBP6.27□□□□□ -1.41
SPO7YAL009W AIP1P46680 615 aaKnown RBP6.27□□□□□ -1.41
SPO7YAL009W SMC3P47037 1230 aa6.27□□□□□ -1.41
SPO7YAL009W YNL011CP53980 444 aa6.27□□□□□ -1.41
SPO7YAL009W LEE1Q02799 301 aaKnown RBP6.27□□□□□ -1.41
SPO7YAL009W LSP1Q12230 341 aaKnown RBP6.27□□□□□ -1.41
SPO7YAL009W GAL10P04397 699 aa6.26□□□□□ -1.41
SPO7YAL009W RNR1P21524 888 aaKnown RBP6.26□□□□□ -1.41
SPO7YAL009W GAC1P28006 793 aa6.26□□□□□ -1.41
SPO7YAL009W SFB3P38810 929 aa6.26□□□□□ -1.41
SPO7YAL009W KAP123P40069 1113 aaKnown RBP6.26□□□□□ -1.41
SPO7YAL009W NTA1P40354 457 aa6.26□□□□□ -1.41
SPO7YAL009W CPR7P47103 393 aa6.26□□□□□ -1.41
SPO7YAL009W VPS25P47142 202 aa6.26□□□□□ -1.41
SPO7YAL009W RPA49Q01080 415 aaPredicted RBP6.26□□□□□ -1.41
SPO7YAL009W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
SPO7YAL009W MUB1Q03162 620 aa6.26□□□□□ -1.41
SPO7YAL009W GIR2Q03768 265 aaPredicted RBP6.26□□□□□ -1.41
SPO7YAL009W PRM6Q04705 352 aa6.26□□□□□ -1.41
SPO7YAL009W GPM2Q12008 311 aa6.26□□□□□ -1.41
SPO7YAL009W TOR1P35169 2470 aa6.26□□□□□ -1.41
SPO7YAL009W TRP3P00937 484 aa6.25□□□□□ -1.41
SPO7YAL009W RPS14AP06367 137 aaKnown RBP6.25□□□□□ -1.41
SPO7YAL009W HIS5P07172 385 aa6.25□□□□□ -1.41
SPO7YAL009W TKL2P33315 681 aa6.25□□□□□ -1.41
SPO7YAL009W DUG2P38149 878 aa6.25□□□□□ -1.41
SPO7YAL009W RPS14BP39516 138 aaKnown RBP6.25□□□□□ -1.41
SPO7YAL009W SFB2P53953 876 aa6.25□□□□□ -1.41
SPO7YAL009W EBS1Q03466 884 aaKnown RBP6.25□□□□□ -1.41
SPO7YAL009W WAR1Q03631 944 aa6.25□□□□□ -1.41
SPO7YAL009W NSE5Q03718 556 aa6.25□□□□□ -1.41
SPO7YAL009W PPM1Q04081 328 aa6.25□□□□□ -1.41
SPO7YAL009W COG4Q06096 861 aa6.25□□□□□ -1.41
SPO7YAL009W TSR1Q07381 788 aaKnown RBP6.25□□□□□ -1.41
SPO7YAL009W YPQ1Q12010 308 aa6.25□□□□□ -1.41
SPO7YAL009W FUS1P11710 512 aa6.24□□□□□ -1.41
SPO7YAL009W COX11P19516 300 aaKnown RBP6.24□□□□□ -1.41
SPO7YAL009W SIR1P21691 654 aa6.24□□□□□ -1.41
SPO7YAL009W STE11P23561 717 aa6.24□□□□□ -1.41
SPO7YAL009W SGF29P25554 259 aa6.24□□□□□ -1.41
SPO7YAL009W EFB1P32471 206 aaKnown RBP6.24□□□□□ -1.41
SPO7YAL009W RPC25P35718 212 aa6.24□□□□□ -1.41
SPO7YAL009W KDX1P36005 433 aa6.24□□□□□ -1.41
SPO7YAL009W OMA1P36163 345 aa6.24□□□□□ -1.41
SPO7YAL009W SHE3P38272 425 aaKnown RBP6.24□□□□□ -1.41
SPO7YAL009W RGD1P38339 666 aa6.24□□□□□ -1.41
SPO7YAL009W GEM1P39722 662 aa6.24□□□□□ -1.41
SPO7YAL009W DSE1P40077 573 aa6.24□□□□□ -1.41
SPO7YAL009W PSY2P40164 858 aa6.24□□□□□ -1.41
SPO7YAL009W DJP1P40564 432 aa6.24□□□□□ -1.41
SPO7YAL009W BFA1P47113 574 aa6.24□□□□□ -1.41
SPO7YAL009W UTP8P53276 713 aaKnown RBP6.24□□□□□ -1.41
SPO7YAL009W YHM2Q04013 314 aa6.24□□□□□ -1.41
SPO7YAL009W BSP1Q06604 576 aa6.24□□□□□ -1.41
SPO7YAL009W SOG2Q08817 791 aa6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 114.8 ms