RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
USP19-204ENST00000398896 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
USP19-204ENST00000398896 ZNF202O95125 648 aa12.13□□□□□ -0.47
USP19-204ENST00000398896 CKAP4Q07065 602 aaKnown RBP12.13□□□□□ -0.47
USP19-204ENST00000398896 COG3Q96JB2 828 aa12.13□□□□□ -0.47
USP19-204ENST00000398896 KIF9Q9HAQ2 790 aa12.13□□□□□ -0.47
USP19-204ENST00000398896 KLC4Q9NSK0 619 aa12.13□□□□□ -0.47
USP19-204ENST00000398896 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
USP19-204ENST00000398896 IRAK1P51617 712 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 CCDC40Q4G0X9 1142 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 SMARCC2Q8TAQ2 1214 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 IKBKBO14920 756 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 PTPN21Q16825 1174 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 AACSQ86V21 672 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
USP19-204ENST00000398896 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 ENO4A6NNW6 628 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 SLC27A2O14975 620 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 ADCY2Q08462 1091 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 RESTQ13127 1097 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 KIRREL3Q8IZU9 778 aa12.12□□□□□ -0.47
USP19-204ENST00000398896 PUS7Q96PZ0 661 aaKnown RBP12.12□□□□□ -0.47
USP19-204ENST00000398896 C9orf78Q9NZ63 289 aaPredicted RBP12.12□□□□□ -0.47
USP19-204ENST00000398896 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP19-204ENST00000398896 AP1G2O75843 785 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 KIF4AO95239 1232 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 Q6ZUG5 572 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 ZKSCAN4Q969J2 545 aaPredicted RBP12.11□□□□□ -0.47
USP19-204ENST00000398896 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
USP19-204ENST00000398896 FLIIQ13045 1269 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 ODF2Q5BJF6 829 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 NAA16Q6N069 864 aaPredicted RBP12.11□□□□□ -0.47
USP19-204ENST00000398896 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
USP19-204ENST00000398896 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 KCNV1Q6PIU1 500 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 C8orf76Q96K31 380 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 FTOQ9C0B1 505 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP19-204ENST00000398896 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 MCM8Q9UJA3 840 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
USP19-204ENST00000398896 MYO1BO43795 1136 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 NDUFA8P51970 172 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 TOGARAM2Q6ZUX3 1019 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 G2E3Q7L622 706 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 CAPZA3Q96KX2 299 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 PNKPQ96T60 521 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 VIPAS39Q9H9C1 493 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 PCDHA7Q9UN72 937 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 SBNO2Q9Y2G9 1366 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 IFT88Q13099 833 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 SPECC1Q5M775 1068 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
USP19-204ENST00000398896 BPIFA3Q9BQP9 254 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 GOLPH3LQ9H4A5 285 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 A1CFQ9NQ94 594 aaKnown RBP12.1□□□□□ -0.47
USP19-204ENST00000398896 MEFVO15553 781 aaPredicted RBP12.1□□□□□ -0.47
USP19-204ENST00000398896 BUB1BO60566 1050 aaPredicted RBP12.1□□□□□ -0.47
USP19-204ENST00000398896 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
USP19-204ENST00000398896 GGCXP38435 758 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 CCNHP51946 323 aaPredicted RBP12.1□□□□□ -0.47
USP19-204ENST00000398896 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP19-204ENST00000398896 SND1Q7KZF4 910 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP19-204ENST00000398896 IL25Q9H293 177 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
USP19-204ENST00000398896 PREPLQ4J6C6 727 aaPredicted RBP12.09□□□□□ -0.47
USP19-204ENST00000398896 SLC35F6Q8N357 371 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 FAXDC2Q96IV6 333 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 IRX2Q9BZI1 471 aaPredicted RBP12.09□□□□□ -0.47
USP19-204ENST00000398896 C14orf93Q9H972 538 aaKnown RBP12.09□□□□□ -0.47
USP19-204ENST00000398896 GUCA1BQ9UMX6 200 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 EMILIN1Q9Y6C2 1016 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
USP19-204ENST00000398896 USP5P45974 858 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 TRIM29Q14134 588 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 MSL3Q8N5Y2 521 aaKnown RBP12.09□□□□□ -0.47
USP19-204ENST00000398896 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 PDCD2Q16342 344 aaPredicted RBP12.09□□□□□ -0.47
USP19-204ENST00000398896 BAIAP2L1Q9UHR4 511 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 RAB21Q9UL25 225 aa12.09□□□□□ -0.47
USP19-204ENST00000398896 NMIQ13287 307 aaPredicted RBP12.08□□□□□ -0.47
USP19-204ENST00000398896 MSANTD4Q8NCY6 345 aa12.08□□□□□ -0.47
USP19-204ENST00000398896 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.47
USP19-204ENST00000398896 THOC1Q96FV9 657 aaKnown RBP12.08□□□□□ -0.47
USP19-204ENST00000398896 PRAM1Q96QH2 718 aa12.08□□□□□ -0.47
USP19-204ENST00000398896 BOLA2Q9H3K6 86 aa12.08□□□□□ -0.47
USP19-204ENST00000398896 RIPOR2Q9Y4F9 1068 aa12.08□□□□□ -0.47
USP19-204ENST00000398896 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
USP19-204ENST00000398896 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
USP19-204ENST00000398896 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
USP19-204ENST00000398896 TEFQ10587 303 aa12.08□□□□□ -0.48
USP19-204ENST00000398896 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
USP19-204ENST00000398896 NUTM2AQ8IVF1 878 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms