RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 A4GALTQ9NPC4 353 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 TSPAN12O95859 305 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 PRDX2P32119 198 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 PMELP40967 661 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 GUCA2AQ02747 115 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 SLC35E3Q7Z769 313 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 TEX29Q8N6K0 151 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 METTL26Q96S19 204 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 SMOC1Q9H4F8 434 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 TRBV23-1A0A0A0MS06 115 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 B4GALT1P15291 398 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 SRSF4Q08170 494 aaKnown RBP14.08□□□□□ -0.16
UBR3-201ENST00000272793 PNRC1Q12796 327 aaPredicted RBP14.08□□□□□ -0.16
UBR3-201ENST00000272793 ALKBH7Q9BT30 221 aaPredicted RBP14.08□□□□□ -0.16
UBR3-201ENST00000272793 HAPLN2Q9GZV7 340 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 EPHA8P29322 1005 aaPredicted RBP14.08□□□□□ -0.16
UBR3-201ENST00000272793 LSM10Q969L4 123 aaKnown RBP14.08□□□□□ -0.16
UBR3-201ENST00000272793 TNCP24821 2201 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 IGHV3-21A0A0B4J1V1 117 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 FURINP09958 794 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 WDFY1Q8IWB7 410 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 TMEM99Q8N816 258 aa14.08□□□□□ -0.16
UBR3-201ENST00000272793 LAMB4A4D0S4 1761 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 NGFP01138 241 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 SOD3P08294 240 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 PRDX1Q06830 199 aaKnown RBP14.07□□□□□ -0.16
UBR3-201ENST00000272793 SYT14P1Q58G82 188 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 ORAI1Q96D31 301 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 C3orf85A0A1B0GTC6 90 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 OR10AC1Q8NH08 325 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 RFESDQ8TAC1 157 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 TMEM70Q9BUB7 260 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 RGPD8O14715 1765 aaPredicted RBP14.07□□□□□ -0.16
UBR3-201ENST00000272793 SCN4AP35499 1836 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 RPL32P62910 135 aaKnown RBP14.07□□□□□ -0.16
UBR3-201ENST00000272793 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 MEF2CQ06413 473 aaPredicted RBP14.07□□□□□ -0.16
UBR3-201ENST00000272793 IL17CQ9P0M4 197 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 SPCS1Q9Y6A9 102 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 A0A1W2PR48 441 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 DMRTA1Q5VZB9 504 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 SUMO4Q6EEV6 95 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 TEX37Q96LM6 180 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 TXNRD2Q9NNW7 524 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 SHISA7A6NL88 538 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 RPS27P42677 84 aaKnown RBP14.07□□□□□ -0.16
UBR3-201ENST00000272793 ZNF56Q15929 161 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 FAM74A4Q5TZK3 123 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 WIPI2Q9Y4P8 454 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 C10orf71Q711Q0 1435 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 GZMKP49863 264 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 KRTCAP3Q53RY4 240 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 LURAP1LQ8IV03 231 aa14.07□□□□□ -0.16
UBR3-201ENST00000272793 SLC25A43Q8WUT9 341 aaPredicted RBP14.07□□□□□ -0.16
UBR3-201ENST00000272793 SAA1P0DJI8 122 aaPredicted RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 FCARP24071 287 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 RTN4RL1Q86UN2 441 aaPredicted RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 EDAQ92838 391 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 ISG20L2Q9H9L3 353 aaKnown RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 A0A1B0GX78 115 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 SBK3P0C264 359 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 GP2P55259 537 aaKnown RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 LOXL3P58215 753 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 TMEM170BQ5T4T1 132 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 FAM219AQ8IW50 185 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 ZG16BQ96DA0 208 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 TOMM7Q9P0U1 55 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 RER1O15258 196 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 IGKV3D-20A0A0C4DH25 116 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 A0A1B0GWB2 263 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 SMIM6P0DI80 62 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 SMIM18P0DKX4 95 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 HIST1H4AP62805 103 aaKnown RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 SRSF5Q13243 272 aaKnown RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 CBARPQ8N350 705 aaPredicted RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 RGP1Q92546 391 aaPredicted RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 GHITMQ9H3K2 345 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 CA10Q9NS85 328 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 NUP98P52948 1817 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 CD1AP06126 327 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 TMIGD3P0DMS9 266 aaPredicted RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 TMEM255AQ5JRV8 349 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 C20orf196Q8IYI0 205 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 SPEM2Q0P670 501 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 JMJD6Q6NYC1 403 aaPredicted RBP14.06□□□□□ -0.16
UBR3-201ENST00000272793 ATOH7Q8N100 152 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 SMIM19Q96E16 107 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 P2RX4Q99571 388 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 INSIG2Q9Y5U4 225 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 FER1L4A9Z1Z3 1794 aa14.06□□□□□ -0.16
UBR3-201ENST00000272793 MT-ND6P03923 174 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 MFAP2P55001 183 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 TMEM33P57088 247 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 KLF13Q9Y2Y9 288 aaPredicted RBP14.05□□□□□ -0.16
UBR3-201ENST00000272793 NEURL3Q96EH8 262 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 RCC2Q9P258 522 aaKnown RBP14.05□□□□□ -0.16
UBR3-201ENST00000272793 A0A1B0GU03 582 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 GPX5O75715 221 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 CXorf1O96002 111 aa14.05□□□□□ -0.16
UBR3-201ENST00000272793 WNT1P04628 370 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms