RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B ERP6P53198 216 aa1.26□□□□□ -2.21
snR39BsnR39B DIP5P53388 608 aa1.26□□□□□ -2.21
snR39BsnR39B ATP25Q03153 612 aa1.26□□□□□ -2.21
snR39BsnR39B THI22Q06490 572 aa1.26□□□□□ -2.21
snR39BsnR39B PIN2Q12057 282 aa1.26□□□□□ -2.21
snR39BsnR39B LEU2P04173 364 aaPredicted RBP1.25□□□□□ -2.21
snR39BsnR39B YAP1P19880 650 aaKnown RBP1.25□□□□□ -2.21
snR39BsnR39B ATO2P32907 282 aa1.25□□□□□ -2.21
snR39BsnR39B YBR139WP38109 508 aa1.25□□□□□ -2.21
snR39BsnR39B OAF1P39720 1047 aaPredicted RBP1.25□□□□□ -2.21
snR39BsnR39B YFL052WP43551 465 aa1.25□□□□□ -2.21
snR39BsnR39B UBP6P43593 499 aaKnown RBP1.25□□□□□ -2.21
snR39BsnR39B TY4A-JP47023 414 aa1.25□□□□□ -2.21
snR39BsnR39B NOP9P47077 666 aaKnown RBP1.25□□□□□ -2.21
snR39BsnR39B SPO75Q07798 868 aa1.25□□□□□ -2.21
snR39BsnR39B HER1Q12276 1246 aa1.25□□□□□ -2.21
snR39BsnR39B HBN1Q96VH4 193 aa1.25□□□□□ -2.21
snR39BsnR39B RPL7AP05737 244 aaKnown RBP1.24□□□□□ -2.21
snR39BsnR39B SEC15P22224 910 aa1.24□□□□□ -2.21
snR39BsnR39B SEC6P32844 805 aa1.24□□□□□ -2.21
snR39BsnR39B YOX1P34161 385 aa1.24□□□□□ -2.21
snR39BsnR39B YBR184WP38299 523 aa1.24□□□□□ -2.21
snR39BsnR39B MTG2P38860 518 aa1.24□□□□□ -2.21
snR39BsnR39B SPF1P39986 1215 aaKnown RBP1.24□□□□□ -2.21
snR39BsnR39B GID8P40208 455 aa1.24□□□□□ -2.21
snR39BsnR39B CFD1P40558 293 aa1.24□□□□□ -2.21
snR39BsnR39B SKP2P42843 763 aa1.24□□□□□ -2.21
snR39BsnR39B RSC8P43609 557 aaKnown RBP1.24□□□□□ -2.21
snR39BsnR39B ALY2P47029 1046 aa1.24□□□□□ -2.21
snR39BsnR39B BNA2P47125 453 aa1.24□□□□□ -2.21
snR39BsnR39B COX18P53239 316 aa1.24□□□□□ -2.21
snR39BsnR39B SMA2Q04658 369 aa1.24□□□□□ -2.21
snR39BsnR39B GFD1Q04839 188 aaKnown RBP1.24□□□□□ -2.21
snR39BsnR39B YDR338CQ05497 695 aa1.24□□□□□ -2.21
snR39BsnR39B BSP1Q06604 576 aa1.24□□□□□ -2.21
snR39BsnR39B SNA4Q07549 140 aa1.24□□□□□ -2.21
snR39BsnR39B FMP25Q08023 583 aa1.24□□□□□ -2.21
snR39BsnR39B MET7Q08645 548 aa1.24□□□□□ -2.21
snR39BsnR39B RPL7BQ12213 244 aaKnown RBP1.24□□□□□ -2.21
snR39BsnR39B ZPS1Q12512 249 aa1.24□□□□□ -2.21
snR39BsnR39B FEN2P25621 512 aaKnown RBP1.23□□□□□ -2.21
snR39BsnR39B SRP40P32583 406 aaPredicted RBP1.23□□□□□ -2.21
snR39BsnR39B FLO5P38894 1075 aa1.23□□□□□ -2.21
snR39BsnR39B YIL024CP40543 189 aa1.23□□□□□ -2.21
snR39BsnR39B ALG2P43636 503 aa1.23□□□□□ -2.21
snR39BsnR39B YJL043WP47053 257 aa1.23□□□□□ -2.21
snR39BsnR39B BOP3P53958 396 aa1.23□□□□□ -2.21
snR39BsnR39B FCP1Q03254 732 aa1.23□□□□□ -2.21
snR39BsnR39B RTT103Q05543 409 aa1.23□□□□□ -2.21
snR39BsnR39B TDA5Q06417 326 aaKnown RBP1.23□□□□□ -2.21
snR39BsnR39B YDL073WQ07454 984 aa1.23□□□□□ -2.21
snR39BsnR39B YDL124WQ07551 312 aaKnown RBP1.23□□□□□ -2.21
snR39BsnR39B ARE1P25628 610 aa1.22□□□□□ -2.21
snR39BsnR39B GSY2P27472 705 aa1.22□□□□□ -2.21
snR39BsnR39B OPT1P40897 799 aa1.22□□□□□ -2.21
snR39BsnR39B SNF12P53628 566 aa1.22□□□□□ -2.21
snR39BsnR39B NAN1Q02931 896 aaKnown RBP1.22□□□□□ -2.21
snR39BsnR39B UBX5Q06682 500 aa1.22□□□□□ -2.21
snR39BsnR39B NOP8Q08287 484 aaPredicted RBP1.22□□□□□ -2.21
snR39BsnR39B OSH2Q12451 1283 aa1.22□□□□□ -2.21
snR39BsnR39B ECM3Q99252 613 aa1.22□□□□□ -2.21
snR39BsnR39B AIM44Q99299 758 aa1.22□□□□□ -2.21
snR39BsnR39B CPA2P03965 1118 aaKnown RBP1.21□□□□□ -2.22
snR39BsnR39B TOM70P07213 617 aaKnown RBP1.21□□□□□ -2.22
snR39BsnR39B YEL076C-AP0CX16 216 aa1.21□□□□□ -2.22
snR39BsnR39B YLR464WP0CX17 216 aa1.21□□□□□ -2.22
snR39BsnR39B RPL8BP29453 256 aaKnown RBP1.21□□□□□ -2.22
snR39BsnR39B MSS1P32559 526 aaPredicted RBP1.21□□□□□ -2.22
snR39BsnR39B YEL076CP39971 216 aa1.21□□□□□ -2.22
snR39BsnR39B YIL092WP40497 633 aa1.21□□□□□ -2.22
snR39BsnR39B MDV1P47025 714 aa1.21□□□□□ -2.22
snR39BsnR39B RFX1P48743 811 aa1.21□□□□□ -2.22
snR39BsnR39B COQ6P53318 479 aa1.21□□□□□ -2.22
snR39BsnR39B CEF1Q03654 590 aaPredicted RBP1.21□□□□□ -2.22
snR39BsnR39B NRT1Q08485 598 aa1.21□□□□□ -2.22
snR39BsnR39B UBX3Q12229 455 aa1.21□□□□□ -2.22
snR39BsnR39B RDL1Q12305 139 aaKnown RBP1.21□□□□□ -2.22
snR39BsnR39B POM34Q12445 299 aa1.21□□□□□ -2.22
snR39BsnR39B YPT1P01123 206 aaKnown RBP1.2□□□□□ -2.22
snR39BsnR39B AQY1P0CD91 305 aa1.2□□□□□ -2.22
snR39BsnR39B YER190C-BP0CX94 160 aa1.2□□□□□ -2.22
snR39BsnR39B YEL077W-AP0CX95 160 aa1.2□□□□□ -2.22
snR39BsnR39B YGR296C-BP0CX96 160 aa1.2□□□□□ -2.22
snR39BsnR39B YPL283W-BP0CX97 160 aa1.2□□□□□ -2.22
snR39BsnR39B YPR204C-AP0CX98 160 aa1.2□□□□□ -2.22
snR39BsnR39B WHI2P12611 486 aa1.2□□□□□ -2.22
snR39BsnR39B PRP16P15938 1071 aaPredicted RBP1.2□□□□□ -2.22
snR39BsnR39B SSD1P24276 1250 aaKnown RBP RIP-Chip data1.2□□□□□ -2.22not detected
snR39BsnR39B KIN82P25341 720 aa1.2□□□□□ -2.22
snR39BsnR39B PER1P25625 357 aa1.2□□□□□ -2.22
snR39BsnR39B ELF1P36053 145 aa1.2□□□□□ -2.22
snR39BsnR39B MRPL7P36519 292 aa1.2□□□□□ -2.22
snR39BsnR39B RPN10P38886 268 aaKnown RBP1.2□□□□□ -2.22
snR39BsnR39B VRG4P40107 337 aa1.2□□□□□ -2.22
snR39BsnR39B YIL077CP40508 320 aa1.2□□□□□ -2.22
snR39BsnR39B YIR016WP40572 265 aa1.2□□□□□ -2.22
snR39BsnR39B HUL4P40985 892 aa1.2□□□□□ -2.22
snR39BsnR39B BST1P43571 1029 aa1.2□□□□□ -2.22
snR39BsnR39B LYS20P48570 428 aaKnown RBP1.2□□□□□ -2.22
snR39BsnR39B NPY1P53164 384 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms