RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C HAP2P06774 265 aa8.76□□□□□ -1.01
SRP54YPR088C SFL1P20134 766 aa8.76□□□□□ -1.01
SRP54YPR088C TRX1P22217 103 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C UBC6P33296 250 aaPredicted RBP8.76□□□□□ -1.01
SRP54YPR088C APM2P38700 605 aa8.76□□□□□ -1.01
SRP54YPR088C FIR1P40020 876 aa8.76□□□□□ -1.01
SRP54YPR088C SIP5P40210 489 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C RPT2P40327 437 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C ASG7P46993 209 aa8.76□□□□□ -1.01
SRP54YPR088C INP52P50942 1183 aa8.76□□□□□ -1.01
SRP54YPR088C SPC98P53540 846 aa8.76□□□□□ -1.01
SRP54YPR088C NOG2P53742 486 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C DIS3Q08162 1001 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C AIM39Q08223 395 aa8.76□□□□□ -1.01
SRP54YPR088C RIO1Q12196 484 aaKnown RBP8.76□□□□□ -1.01
SRP54YPR088C EMP46Q12396 444 aa8.76□□□□□ -1.01
SRP54YPR088C CIT2P08679 460 aa8.75□□□□□ -1.01
SRP54YPR088C LRE1P25579 583 aaKnown RBP8.75□□□□□ -1.01
SRP54YPR088C SEC1P30619 724 aaKnown RBP8.75□□□□□ -1.01
SRP54YPR088C YHR202WP38887 602 aa8.75□□□□□ -1.01
SRP54YPR088C MDM38Q08179 573 aa8.75□□□□□ -1.01
SRP54YPR088C CIR2Q08822 631 aa8.75□□□□□ -1.01
SRP54YPR088C TUB3P09734 445 aaKnown RBP8.74□□□□□ -1.01
SRP54YPR088C SLA2P33338 968 aa8.74□□□□□ -1.01
SRP54YPR088C WHI3P34761 661 aaKnown RBP8.74□□□□□ -1.01
SRP54YPR088C ABZ1P37254 787 aaPredicted RBP8.74□□□□□ -1.01
SRP54YPR088C SWC5P38326 303 aa8.74□□□□□ -1.01
SRP54YPR088C XDJ1P39102 459 aa8.74□□□□□ -1.01
SRP54YPR088C MSD1P15179 658 aaKnown RBP8.73□□□□□ -1.01
SRP54YPR088C AEP2P22136 580 aa8.73□□□□□ -1.01
SRP54YPR088C CAD1P24813 409 aaKnown RBP8.73□□□□□ -1.01
SRP54YPR088C SRB2P34162 210 aa8.73□□□□□ -1.01
SRP54YPR088C LAS1P36146 502 aaPredicted RBP8.73□□□□□ -1.01
SRP54YPR088C CCL1P37366 393 aa8.73□□□□□ -1.01
SRP54YPR088C PCA1P38360 1216 aa8.73□□□□□ -1.01
SRP54YPR088C TIF5P38431 405 aaKnown RBP8.73□□□□□ -1.01
SRP54YPR088C YEL023CP39992 682 aa8.73□□□□□ -1.01
SRP54YPR088C OPT1P40897 799 aa8.73□□□□□ -1.01
SRP54YPR088C MIC19P43594 170 aa8.73□□□□□ -1.01
SRP54YPR088C PFD1P46988 109 aa8.73□□□□□ -1.01
SRP54YPR088C YNL108CP53929 270 aa8.73□□□□□ -1.01
SRP54YPR088C VPS5Q92331 675 aa8.73□□□□□ -1.01
SRP54YPR088C ADK2P26364 225 aa8.72□□□□□ -1.01
SRP54YPR088C GCD6P32501 712 aaKnown RBP8.72□□□□□ -1.01
SRP54YPR088C KHA1P40309 873 aa8.72□□□□□ -1.01
SRP54YPR088C YIL054WP40524 105 aa8.72□□□□□ -1.01
SRP54YPR088C YML6P51998 286 aa8.72□□□□□ -1.01
SRP54YPR088C YNL247WP53852 767 aaKnown RBP8.72□□□□□ -1.01
SRP54YPR088C SLG1P54867 378 aa8.72□□□□□ -1.01
SRP54YPR088C RPL22BP56628 122 aaKnown RBP8.72□□□□□ -1.01
SRP54YPR088C UTP6Q02354 440 aaKnown RBP8.72□□□□□ -1.01
SRP54YPR088C TAF9Q05027 157 aa8.72□□□□□ -1.01
SRP54YPR088C KAP95Q06142 861 aaKnown RBP8.72□□□□□ -1.01
SRP54YPR088C PIB1Q06651 286 aa8.72□□□□□ -1.01
SRP54YPR088C APC5Q08683 685 aa8.72□□□□□ -1.01
SRP54YPR088C TAF10Q12030 206 aa8.72□□□□□ -1.01
SRP54YPR088C YRR1Q12172 810 aa8.72□□□□□ -1.01
SRP54YPR088C PRP9P19736 530 aaKnown RBP8.72□□□□□ -1.01
SRP54YPR088C TKL2P33315 681 aa8.72□□□□□ -1.01
SRP54YPR088C HMT1P38074 348 aa8.72□□□□□ -1.01
SRP54YPR088C APN2P38207 520 aa8.72□□□□□ -1.01
SRP54YPR088C YMR134WP40207 237 aa8.72□□□□□ -1.01
SRP54YPR088C YNL320WP42840 284 aa8.72□□□□□ -1.01
SRP54YPR088C NMD5P46970 1048 aa8.72□□□□□ -1.01
SRP54YPR088C YNL011CP53980 444 aa8.72□□□□□ -1.01
SRP54YPR088C CDC55Q00362 526 aa8.72□□□□□ -1.01
SRP54YPR088C GPM2Q12008 311 aa8.72□□□□□ -1.01
SRP54YPR088C ECM2P38241 364 aaKnown RBP8.71□□□□□ -1.02
SRP54YPR088C SPP381P38282 291 aaPredicted RBP8.71□□□□□ -1.02
SRP54YPR088C MSG5P38590 489 aa8.71□□□□□ -1.02
SRP54YPR088C RAD55P38953 406 aa8.71□□□□□ -1.02
SRP54YPR088C LYS9P38999 446 aa8.71□□□□□ -1.02
SRP54YPR088C ERP2P39704 215 aa8.71□□□□□ -1.02
SRP54YPR088C ARG2P40360 574 aa8.71□□□□□ -1.02
SRP54YPR088C TMA108P40462 946 aa8.71□□□□□ -1.02
SRP54YPR088C THI7Q05998 598 aa8.71□□□□□ -1.02
SRP54YPR088C YKL068W-AQ3E826 78 aa8.71□□□□□ -1.02
SRP54YPR088C RAD10P06838 210 aa8.7□□□□□ -1.02
SRP54YPR088C YPK1P12688 680 aaKnown RBP8.7□□□□□ -1.02
SRP54YPR088C MUD2P36084 527 aaKnown RBP8.7□□□□□ -1.02
SRP54YPR088C YBR284WP38150 797 aa8.7□□□□□ -1.02
SRP54YPR088C TCB2P48231 1178 aa8.7□□□□□ -1.02
SRP54YPR088C YNL040WP53960 456 aaPredicted RBP8.7□□□□□ -1.02
SRP54YPR088C YPL062WQ02781 134 aa8.7□□□□□ -1.02
SRP54YPR088C SPP1Q03012 353 aa8.7□□□□□ -1.02
SRP54YPR088C FMP25Q08023 583 aa8.7□□□□□ -1.02
SRP54YPR088C RCL1Q08096 367 aaPredicted RBP8.7□□□□□ -1.02
SRP54YPR088C YDR018CQ12185 396 aa8.7□□□□□ -1.02
SRP54YPR088C VPS13Q07878 3144 aa8.7□□□□□ -1.02
SRP54YPR088C KGD2P19262 463 aaPredicted RBP8.69□□□□□ -1.02
SRP54YPR088C PUF4P25339 888 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SRP54YPR088C VPH1P32563 840 aaKnown RBP8.69□□□□□ -1.02
SRP54YPR088C PBP2P38151 413 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SRP54YPR088C VHC1P38329 1120 aa8.69□□□□□ -1.02
SRP54YPR088C TGL3P40308 642 aa8.69□□□□□ -1.02
SRP54YPR088C SAP185P40856 1058 aa8.69□□□□□ -1.02
SRP54YPR088C NUT1P53114 1132 aa8.69□□□□□ -1.02
SRP54YPR088C ELP3Q02908 557 aaKnown RBP8.69□□□□□ -1.02
SRP54YPR088C THI20Q08224 551 aa8.69□□□□□ -1.02
SRP54YPR088C NBP2Q12163 236 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms