RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	ERV41	Q04651	352 aa		10.29	□□□□□ -0.76
TIF6	YPR016C	PRM6	Q04705	352 aa		10.29	□□□□□ -0.76
TIF6	YPR016C	MRI1	Q06489	411 aa	Known RBP	10.29	□□□□□ -0.76
TIF6	YPR016C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	10.29	□□□□□ -0.76	not detected
TIF6	YPR016C	DIS3	Q08162	1001 aa	Known RBP	10.29	□□□□□ -0.76
TIF6	YPR016C	GPM2	Q12008	311 aa		10.29	□□□□□ -0.76
TIF6	YPR016C	SPO21	Q12411	609 aa		10.29	□□□□□ -0.76
TIF6	YPR016C	YLR422W	Q06409	1932 aa		10.29	□□□□□ -0.76
TIF6	YPR016C	KGD2	P19262	463 aa	Predicted RBP	10.28	□□□□□ -0.76
TIF6	YPR016C	STE11	P23561	717 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	YBL055C	P34220	418 aa	Predicted RBP	10.28	□□□□□ -0.76
TIF6	YPR016C	YBR056W	P38081	501 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	APM2	P38700	605 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	FAF1	P40546	346 aa	Predicted RBP	10.28	□□□□□ -0.76
TIF6	YPR016C	NOG2	P53742	486 aa	Known RBP	10.28	□□□□□ -0.76
TIF6	YPR016C	SLG1	P54867	378 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	RRB1	Q04225	511 aa	Known RBP	10.28	□□□□□ -0.76
TIF6	YPR016C	AIM39	Q08223	395 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	10.28	□□□□□ -0.76	not detected
TIF6	YPR016C	YRR1	Q12172	810 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	HRT3	Q12347	344 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	SFI1	Q12369	946 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	ZRT2	Q12436	422 aa		10.28	□□□□□ -0.76
TIF6	YPR016C	NOP14	Q99207	810 aa	Known RBP	10.28	□□□□□ -0.76
TIF6	YPR016C	ADE3	P07245	946 aa	Known RBP	10.27	□□□□□ -0.77
TIF6	YPR016C	SEC1	P30619	724 aa	Known RBP	10.27	□□□□□ -0.77
TIF6	YPR016C	YEL043W	P32618	956 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	SRB2	P34162	210 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	TGL3	P40308	642 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	ELP3	Q02908	557 aa	Known RBP	10.27	□□□□□ -0.77
TIF6	YPR016C	URH1	Q04179	340 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	UFO1	Q04511	668 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	IVY1	Q04934	453 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	DDC1	Q08949	612 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	LEA1	Q08963	238 aa	Predicted RBP	10.27	□□□□□ -0.77
TIF6	YPR016C	APM4	Q99186	491 aa		10.27	□□□□□ -0.77
TIF6	YPR016C	ATP1	P07251	545 aa	Known RBP	10.26	□□□□□ -0.77
TIF6	YPR016C	PUT4	P15380	627 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	TRX1	P22217	103 aa	Known RBP	10.26	□□□□□ -0.77
TIF6	YPR016C	VPH1	P32563	840 aa	Known RBP	10.26	□□□□□ -0.77
TIF6	YPR016C	BYE1	P36106	594 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	SIF2	P38262	535 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	KHA1	P40309	873 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	YIR016W	P40572	265 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	MAD1	P40957	749 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	RPC17	P47076	161 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	INP52	P50942	1183 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	MAL13	P53338	473 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	ADA2	Q02336	434 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	HEH2	Q03281	663 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	SXM1	Q04175	944 aa	Known RBP	10.26	□□□□□ -0.77
TIF6	YPR016C	TAF9	Q05027	157 aa		10.26	□□□□□ -0.77
TIF6	YPR016C	RCL1	Q08096	367 aa	Predicted RBP	10.26	□□□□□ -0.77
TIF6	YPR016C	MAS1	P10507	462 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	AEP2	P22136	580 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	CAP1	P28495	268 aa	Known RBP	10.25	□□□□□ -0.77
TIF6	YPR016C	PMC1	P38929	1173 aa	Predicted RBP	10.25	□□□□□ -0.77
TIF6	YPR016C	AVT2	P39981	480 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	PRP31	P49704	494 aa	Predicted RBP	10.25	□□□□□ -0.77
TIF6	YPR016C	ECI1	Q05871	280 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	SAM3	Q08986	587 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	AIM41	Q12032	185 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	NBP2	Q12163	236 aa		10.25	□□□□□ -0.77
TIF6	YPR016C	RAD27	P26793	382 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	URK1	P27515	501 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	HSL7	P38274	827 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	SWC5	P38326	303 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	RGD1	P38339	666 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	RAD55	P38953	406 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	YIL054W	P40524	105 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	CDC1	P40986	491 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	TAF1	P46677	1066 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	EAR1	Q03212	550 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	ATG23	Q06671	453 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	VPS5	Q92331	675 aa		10.24	□□□□□ -0.77
TIF6	YPR016C	PGS1	P25578	521 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	PEP7	P32609	515 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	CCT4	P39078	528 aa	Known RBP	10.23	□□□□□ -0.77
TIF6	YPR016C	GUF1	P46943	645 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	VTC4	P47075	721 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	RIM8	P53179	542 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	YGR283C	P53336	341 aa	Predicted RBP	10.23	□□□□□ -0.77
TIF6	YPR016C	SPO71	Q03868	1245 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	VTI1	Q04338	217 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	THI20	Q08224	551 aa		10.23	□□□□□ -0.77
TIF6	YPR016C	PMS1	P14242	873 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	IDI1	P15496	288 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	END3	P39013	349 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	MMF1	P40185	145 aa	Known RBP	10.22	□□□□□ -0.77
TIF6	YPR016C	SAP185	P40856	1058 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	MAF1	P41910	395 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	YNL040W	P53960	456 aa	Predicted RBP	10.22	□□□□□ -0.77
TIF6	YPR016C	CDC55	Q00362	526 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	YPL062W	Q02781	134 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	RKM2	Q03942	479 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	TDA9	Q04545	1251 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	HRD3	Q05787	833 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	MNL2	Q12205	849 aa		10.22	□□□□□ -0.77
TIF6	YPR016C	PDR1	P12383	1068 aa		10.21	□□□□□ -0.77
TIF6	YPR016C	MET4	P32389	672 aa		10.21	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms