RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W RCL1Q08096 367 aaPredicted RBP7.05□□□□□ -1.28
LSC1YOR142W SPE3Q12074 293 aaKnown RBP7.05□□□□□ -1.28
LSC1YOR142W RRP6Q12149 733 aaKnown RBP7.05□□□□□ -1.28
LSC1YOR142W RPS3P05750 240 aaKnown RBP7.04□□□□□ -1.28
LSC1YOR142W DSS4P32601 143 aa7.04□□□□□ -1.28
LSC1YOR142W GYP6P32806 458 aa7.04□□□□□ -1.28
LSC1YOR142W TSA1P34760 196 aaKnown RBP7.04□□□□□ -1.28
LSC1YOR142W AVT2P39981 480 aa7.04□□□□□ -1.28
LSC1YOR142W CDC1P40986 491 aa7.04□□□□□ -1.28
LSC1YOR142W PFD1P46988 109 aa7.04□□□□□ -1.28
LSC1YOR142W YPL062WQ02781 134 aa7.04□□□□□ -1.28
LSC1YOR142W NSE5Q03718 556 aa7.04□□□□□ -1.28
LSC1YOR142W ARO80Q04052 950 aa7.04□□□□□ -1.28
LSC1YOR142W HRD3Q05787 833 aa7.04□□□□□ -1.28
LSC1YOR142W IRC10Q08118 586 aa7.04□□□□□ -1.28
LSC1YOR142W MDM38Q08179 573 aa7.04□□□□□ -1.28
LSC1YOR142W YOL036WQ08206 761 aa7.04□□□□□ -1.28
LSC1YOR142W HMI1Q12039 706 aa7.04□□□□□ -1.28
LSC1YOR142W NDJ1Q12366 352 aa7.04□□□□□ -1.28
LSC1YOR142W BI2P03873 423 aa7.03□□□□□ -1.28
LSC1YOR142W BI4P03879 638 aa7.03□□□□□ -1.28
LSC1YOR142W STE11P23561 717 aa7.03□□□□□ -1.28
LSC1YOR142W PUP3P25451 205 aaKnown RBP7.03□□□□□ -1.28
LSC1YOR142W PDC6P26263 563 aaKnown RBP7.03□□□□□ -1.28
LSC1YOR142W DAL1P32375 460 aa7.03□□□□□ -1.28
LSC1YOR142W MPE1P35728 441 aaKnown RBP7.03□□□□□ -1.28
LSC1YOR142W JNM1P36224 373 aa7.03□□□□□ -1.28
LSC1YOR142W DSF2P38213 736 aa7.03□□□□□ -1.28
LSC1YOR142W YBR225WP38321 900 aa7.03□□□□□ -1.28
LSC1YOR142W QNS1P38795 714 aaKnown RBP7.03□□□□□ -1.28
LSC1YOR142W BTT1P40314 149 aaPredicted RBP7.03□□□□□ -1.28
LSC1YOR142W YTA12P40341 825 aa7.03□□□□□ -1.28
LSC1YOR142W SHQ1P40486 507 aaPredicted RBP7.03□□□□□ -1.28
LSC1YOR142W PRK1P40494 810 aa7.03□□□□□ -1.28
LSC1YOR142W LSB6P42951 607 aa7.03□□□□□ -1.28
LSC1YOR142W PSP1P50896 841 aaKnown RBP7.03□□□□□ -1.28
LSC1YOR142W APL4Q12028 832 aa7.03□□□□□ -1.28
LSC1YOR142W ATG9Q12142 997 aa7.03□□□□□ -1.28
LSC1YOR142W BI3Q9ZZW7 517 aa7.03□□□□□ -1.28
LSC1YOR142W JIP3O13555 125 aa7.02□□□□□ -1.29
LSC1YOR142W MTF1P14908 341 aaKnown RBP7.02□□□□□ -1.29
LSC1YOR142W SIR1P21691 654 aa7.02□□□□□ -1.29
LSC1YOR142W PPH22P23595 377 aa7.02□□□□□ -1.29
LSC1YOR142W RRN6P32786 894 aa7.02□□□□□ -1.29
LSC1YOR142W LEO1P38439 464 aa7.02□□□□□ -1.29
LSC1YOR142W TIF11P38912 153 aaKnown RBP7.02□□□□□ -1.29
LSC1YOR142W ATG3P40344 310 aa7.02□□□□□ -1.29
LSC1YOR142W HXT8P40886 569 aa7.02□□□□□ -1.29
LSC1YOR142W MTD1Q02046 320 aaKnown RBP7.02□□□□□ -1.29
LSC1YOR142W YHM2Q04013 314 aa7.02□□□□□ -1.29
LSC1YOR142W TMN2Q04562 672 aa7.02□□□□□ -1.29
LSC1YOR142W YDR222WQ04925 415 aa7.02□□□□□ -1.29
LSC1YOR142W LCB4Q12246 624 aa7.02□□□□□ -1.29
LSC1YOR142W EMP46Q12396 444 aa7.02□□□□□ -1.29
LSC1YOR142W KAR3P17119 729 aa7.01□□□□□ -1.29
LSC1YOR142W EST1P17214 699 aaPredicted RBP7.01□□□□□ -1.29
LSC1YOR142W YKL050CP35736 922 aa7.01□□□□□ -1.29
LSC1YOR142W YBR053CP38235 358 aa7.01□□□□□ -1.29
LSC1YOR142W NUP60P39705 539 aa7.01□□□□□ -1.29
LSC1YOR142W STU2P46675 888 aa7.01□□□□□ -1.29
LSC1YOR142W YOR059CQ08448 450 aaKnown RBP7.01□□□□□ -1.29
LSC1YOR142W VMA4P22203 233 aaKnown RBP7□□□□□ -1.29
LSC1YOR142W SGF29P25554 259 aa7□□□□□ -1.29
LSC1YOR142W POL12P38121 705 aaPredicted RBP7□□□□□ -1.29
LSC1YOR142W YNL144CP53907 740 aa7□□□□□ -1.29
LSC1YOR142W ERG5P54781 538 aa7□□□□□ -1.29
LSC1YOR142W GYL1Q04322 720 aa7□□□□□ -1.29
LSC1YOR142W TAF9Q05027 157 aa7□□□□□ -1.29
LSC1YOR142W YOR387CQ08910 206 aa7□□□□□ -1.29
LSC1YOR142W NEW1Q08972 1196 aaKnown RBP7□□□□□ -1.29
LSC1YOR142W LPX1Q12405 387 aaKnown RBP7□□□□□ -1.29
LSC1YOR142W RPS14AP06367 137 aaKnown RBP6.99□□□□□ -1.29
LSC1YOR142W RGR1P19263 1082 aa6.99□□□□□ -1.29
LSC1YOR142W AEP2P22136 580 aa6.99□□□□□ -1.29
LSC1YOR142W RRP43P25359 394 aaPredicted RBP6.99□□□□□ -1.29
LSC1YOR142W MCM2P29469 868 aa6.99□□□□□ -1.29
LSC1YOR142W SRB2P34162 210 aa6.99□□□□□ -1.29
LSC1YOR142W MIC60P36112 540 aa6.99□□□□□ -1.29
LSC1YOR142W TDA3P38758 523 aa6.99□□□□□ -1.29
LSC1YOR142W MED6P38782 295 aa6.99□□□□□ -1.29
LSC1YOR142W NMD3P38861 518 aaKnown RBP6.99□□□□□ -1.29
LSC1YOR142W SET5P38890 526 aaKnown RBP6.99□□□□□ -1.29
LSC1YOR142W SMC2P38989 1170 aaKnown RBP6.99□□□□□ -1.29
LSC1YOR142W RPS14BP39516 138 aaKnown RBP6.99□□□□□ -1.29
LSC1YOR142W YER189WP40104 122 aa6.99□□□□□ -1.29
LSC1YOR142W SNZ3P43545 298 aa6.99□□□□□ -1.29
LSC1YOR142W VTC4P47075 721 aa6.99□□□□□ -1.29
LSC1YOR142W HOP2P53187 214 aa6.99□□□□□ -1.29
LSC1YOR142W YGR111WP53265 400 aa6.99□□□□□ -1.29
LSC1YOR142W SNZ2P53824 298 aa6.99□□□□□ -1.29
LSC1YOR142W PIR3Q03180 325 aa6.99□□□□□ -1.29
LSC1YOR142W SPG3Q04398 127 aaPredicted RBP6.99□□□□□ -1.29
LSC1YOR142W SIL1Q08199 421 aa6.99□□□□□ -1.29
LSC1YOR142W PDH1Q12428 516 aaKnown RBP6.99□□□□□ -1.29
LSC1YOR142W FAB1P34756 2278 aa6.99□□□□□ -1.29
LSC1YOR142W HIS5P07172 385 aa6.98□□□□□ -1.29
LSC1YOR142W ECM13P38195 257 aa6.98□□□□□ -1.29
LSC1YOR142W NCL1P38205 684 aaKnown RBP6.98□□□□□ -1.29
LSC1YOR142W HSL7P38274 827 aa6.98□□□□□ -1.29
LSC1YOR142W ARP1P38696 384 aa6.98□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms