RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	HMG2	P12684	1045 aa		10.05	□□□□□ -0.8
MSB4	YOL112W	RAD57	P25301	460 aa		10.05	□□□□□ -0.8
MSB4	YOL112W	NCL1	P38205	684 aa	Known RBP	10.05	□□□□□ -0.8
MSB4	YOL112W	STU2	P46675	888 aa		10.05	□□□□□ -0.8
MSB4	YOL112W	BFA1	P47113	574 aa		10.05	□□□□□ -0.8
MSB4	YOL112W	CEG1	Q01159	459 aa	Predicted RBP	10.05	□□□□□ -0.8
MSB4	YOL112W	YPL062W	Q02781	134 aa		10.05	□□□□□ -0.8
MSB4	YOL112W	YLR001C	Q07895	862 aa		10.05	□□□□□ -0.8
MSB4	YOL112W	EST1	P17214	699 aa	Predicted RBP	10.04	□□□□□ -0.8
MSB4	YOL112W	RAD16	P31244	790 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	DSS4	P32601	143 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	MFT1	P33441	392 aa	Known RBP	10.04	□□□□□ -0.8
MSB4	YOL112W	BCH2	P36122	765 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	CDC27	P38042	758 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	TDA3	P38758	523 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	SFB3	P38810	929 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	AVT2	P39981	480 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	YGR021W	P53212	290 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	SYH1	Q02875	849 aa	Known RBP	10.04	□□□□□ -0.8
MSB4	YOL112W	GCN5	Q03330	439 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	SOV1	Q04748	898 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	HRD3	Q05787	833 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	ECM22	Q05958	814 aa	Predicted RBP	10.04	□□□□□ -0.8
MSB4	YOL112W	RRD2	Q12461	358 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	ERG11	P10614	530 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	TSA1	P34760	196 aa	Known RBP	10.04	□□□□□ -0.8
MSB4	YOL112W	SEC9	P40357	651 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	UTP8	P53276	713 aa	Known RBP	10.04	□□□□□ -0.8
MSB4	YOL112W	YPQ1	Q12010	308 aa		10.04	□□□□□ -0.8
MSB4	YOL112W	SEC23	P15303	768 aa	Known RBP	10.03	□□□□□ -0.8
MSB4	YOL112W	PEX34	P25584	144 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	DAL1	P32375	460 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	SPC110	P32380	944 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	EBP2	P36049	427 aa	Known RBP	10.03	□□□□□ -0.8
MSB4	YOL112W	PRK1	P40494	810 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	EFM4	P40516	257 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	SNZ3	P43545	298 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	SNZ2	P53824	298 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	ALF1	P53904	254 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	CTR9	P89105	1077 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	MTD1	Q02046	320 aa	Known RBP	10.03	□□□□□ -0.8
MSB4	YOL112W	TAF9	Q05027	157 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	YDR278C	Q05612	105 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	SPE3	Q12074	293 aa	Known RBP	10.03	□□□□□ -0.8
MSB4	YOL112W	DAS2	Q12084	232 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	NDJ1	Q12366	352 aa		10.03	□□□□□ -0.8
MSB4	YOL112W	KEX2	P13134	814 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	SRB2	P34162	210 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	YBR225W	P38321	900 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	YER189W	P40104	122 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	PML39	Q03760	334 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	YMR018W	Q04364	514 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	BSP1	Q06604	576 aa		10.02	□□□□□ -0.81
MSB4	YOL112W	PUT4	P15380	627 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	AEP2	P22136	580 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	HXT1	P32465	570 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	ISF1	P32488	338 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	STO1	P34160	861 aa	Known RBP	10.01	□□□□□ -0.81
MSB4	YOL112W	DUG2	P38149	878 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	YBR053C	P38235	358 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	TMN3	P40071	706 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	BTT1	P40314	149 aa	Predicted RBP	10.01	□□□□□ -0.81
MSB4	YOL112W	ASG1	P40467	964 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	VTC4	P47075	721 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	ELP3	Q02908	557 aa	Known RBP	10.01	□□□□□ -0.81
MSB4	YOL112W	DIG1	Q03063	452 aa	Known RBP	10.01	□□□□□ -0.81
MSB4	YOL112W	AIM39	Q08223	395 aa		10.01	□□□□□ -0.81
MSB4	YOL112W	PPZ1	P26570	692 aa		10	□□□□□ -0.81
MSB4	YOL112W	SEC1	P30619	724 aa	Known RBP	10	□□□□□ -0.81
MSB4	YOL112W	HSL7	P38274	827 aa		10	□□□□□ -0.81
MSB4	YOL112W	TCD1	P38756	429 aa		10	□□□□□ -0.81
MSB4	YOL112W	PSY2	P40164	858 aa		10	□□□□□ -0.81
MSB4	YOL112W	PSP1	P50896	841 aa	Known RBP	10	□□□□□ -0.81
MSB4	YOL112W	RGR1	P19263	1082 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	RAM1	P22007	431 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	SPT5	P27692	1063 aa	Known RBP	9.99	□□□□□ -0.81
MSB4	YOL112W	YKL097C	P34245	136 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	SEG2	P34250	1132 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	BLI1	P35727	113 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	HIS2	P38635	335 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	NMD3	P38861	518 aa	Known RBP	9.99	□□□□□ -0.81
MSB4	YOL112W	YNL144C	P53907	740 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	LEE1	Q02799	301 aa	Known RBP	9.99	□□□□□ -0.81
MSB4	YOL112W	NSE5	Q03718	556 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	SPG3	Q04398	127 aa	Predicted RBP	9.99	□□□□□ -0.81
MSB4	YOL112W	YDR344C	Q05510	147 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	YRR1	Q12172	810 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	LCB4	Q12246	624 aa		9.99	□□□□□ -0.81
MSB4	YOL112W	ABD1	P32783	436 aa	Predicted RBP	9.98	□□□□□ -0.81
MSB4	YOL112W	COY1	P34237	679 aa		9.98	□□□□□ -0.81
MSB4	YOL112W	MCX1	P38323	520 aa	Predicted RBP	9.98	□□□□□ -0.81
MSB4	YOL112W	NUP60	P39705	539 aa		9.98	□□□□□ -0.81
MSB4	YOL112W	BRO1	P48582	844 aa		9.98	□□□□□ -0.81
MSB4	YOL112W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	9.98	□□□□□ -0.81	not detected
MSB4	YOL112W	THI20	Q08224	551 aa		9.98	□□□□□ -0.81
MSB4	YOL112W	APC5	Q08683	685 aa		9.98	□□□□□ -0.81
MSB4	YOL112W	ADE3	P07245	946 aa	Known RBP	9.98	□□□□□ -0.81
MSB4	YOL112W	MTF1	P14908	341 aa	Known RBP	9.98	□□□□□ -0.81
MSB4	YOL112W	BET2	P20133	325 aa		9.98	□□□□□ -0.81
MSB4	YOL112W	PPH22	P23595	377 aa		9.98	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms