RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	UFO1	Q04511	668 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	TRM11	Q12463	433 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	ECM3	Q99252	613 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	AI5_BETA	Q9ZZX0	354 aa		4.89	□□□□□ -1.63
SSB2	YNL209W	MAS2	P11914	482 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	EFT1	P32324	842 aa	Known RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	PEP12	P32854	288 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	YBL055C	P34220	418 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	ASH1	P34233	588 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	COY1	P34237	679 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	PAM1	P37304	830 aa	Known RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	VHC1	P38329	1120 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	FTR1	P40088	404 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SMX2	P40204	77 aa	Known RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	ZAP1	P47043	880 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	URB2	P47108	1174 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	MNP1	P53163	194 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	EEB1	Q02891	456 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	RSM28	Q03430	361 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	ATG16	Q03818	150 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SPO71	Q03868	1245 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	YPR097W	Q06839	1073 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	YDL073W	Q07454	984 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	RIO1	Q12196	484 aa	Known RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	BI2	P03873	423 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	BI4	P03879	638 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	POL3	P15436	1097 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
SSB2	YNL209W	PRR1	P28708	518 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	PLC1	P32383	869 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SMY2	P32909	740 aa	Known RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	SEG2	P34250	1132 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	OAF3	P36023	863 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SAK1	P38990	1142 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	TMN3	P40071	706 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SLX8	P40072	274 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SAP185	P40856	1058 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	SPR3	P41901	512 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	TRS85	P46944	698 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	YJR039W	P47107	1121 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	RSM26	P47141	266 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	MDR1	P53258	950 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	IST1	P53843	298 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	YAF9	P53930	226 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	MTG1	Q03151	367 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB2	YNL209W	PIG1	Q06216	648 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	MPC54	Q08550	464 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	BI3	Q9ZZW7	517 aa		4.88	□□□□□ -1.63
SSB2	YNL209W	JIP3	O13555	125 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	RAD10	P06838	210 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	RPB2	P08518	1224 aa	Known RBP	4.87	□□□□□ -1.63
SSB2	YNL209W	CBF1	P17106	351 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	TMT1	P32643	299 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	TOM20	P35180	183 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	ATG14	P38270	344 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	YBP1	P38315	674 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	KSP1	P38691	1029 aa	Known RBP	4.87	□□□□□ -1.63
SSB2	YNL209W	INA22	P40576	216 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	ASG7	P46993	209 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	YNL035C	P53962	389 aa	Known RBP	4.87	□□□□□ -1.63
SSB2	YNL209W	GPD1	Q00055	391 aa	Known RBP	4.87	□□□□□ -1.63
SSB2	YNL209W	SRP1	Q02821	542 aa	Known RBP	4.87	□□□□□ -1.63
SSB2	YNL209W	SSQ1	Q05931	657 aa	Predicted RBP	4.87	□□□□□ -1.63
SSB2	YNL209W	YLR455W	Q06188	304 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	FRA1	Q07825	749 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	GIS3	Q12418	502 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	SEY1	Q99287	776 aa		4.87	□□□□□ -1.63
SSB2	YNL209W	ADE4	P04046	510 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	ASP3-2	P0CX77	362 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	ASP3-3	P0CX78	362 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	ASP3-4	P0CX79	362 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	ASP3-1	P0CZ17	362 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	NAT1	P12945	854 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	ILV6	P25605	309 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	PTC3	P34221	468 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	TBS1	P38114	1094 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	MMS4	P38257	691 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	GUA1	P38625	525 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	MMS21	P38632	267 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	PPX1	P38698	397 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	QNS1	P38795	714 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	YMR134W	P40207	237 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	ALY2	P47029	1046 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	SHE10	P53075	577 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	PNG1	Q02890	363 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
SSB2	YNL209W	YPL225W	Q08971	146 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	COX4	P04037	155 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	CMD1	P06787	147 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	SPO16	P17122	198 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	COX11	P19516	300 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	AEP2	P22136	580 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	SEC15	P22224	910 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	MGT1	P26188	188 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	CDC3	P32457	520 aa	Known RBP	4.86	□□□□□ -1.63
SSB2	YNL209W	DPH2	P32461	534 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	HIR2	P32480	875 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	CCL1	P37366	393 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	APM2	P38700	605 aa		4.86	□□□□□ -1.63
SSB2	YNL209W	SAH1	P39954	449 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms