RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YGR161W-CQ3E744 92 aa4.53□□□□□ -1.68
YSF3YNL138W-A FIG2P25653 1609 aa4.53□□□□□ -1.68
YSF3YNL138W-A TUB2P02557 457 aaKnown RBP4.52□□□□□ -1.69
YSF3YNL138W-A TOP1P04786 769 aa4.52□□□□□ -1.69
YSF3YNL138W-A PMI40P29952 429 aaKnown RBP4.52□□□□□ -1.69
YSF3YNL138W-A DOS2P54858 310 aa4.52□□□□□ -1.69
YSF3YNL138W-A NRG1Q03125 231 aa4.52□□□□□ -1.69
YSF3YNL138W-A COG8Q04632 607 aa4.52□□□□□ -1.69
YSF3YNL138W-A ERG4P25340 473 aa4.51□□□□□ -1.69
YSF3YNL138W-A MGS1P40151 587 aa4.51□□□□□ -1.69
YSF3YNL138W-A YIL089WP40500 205 aa4.51□□□□□ -1.69
YSF3YNL138W-A GUD1Q07729 489 aa4.51□□□□□ -1.69
YSF3YNL138W-A TGL5Q12043 749 aa4.51□□□□□ -1.69
YSF3YNL138W-A SSD1P24276 1250 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
YSF3YNL138W-A CCR4P31384 837 aaKnown RBP4.5□□□□□ -1.69
YSF3YNL138W-A CRP1P38845 465 aaKnown RBP4.5□□□□□ -1.69
YSF3YNL138W-A AIM21P40563 679 aa4.5□□□□□ -1.69
YSF3YNL138W-A MUP1P50276 574 aa4.5□□□□□ -1.69
YSF3YNL138W-A ARP4P80428 489 aa4.5□□□□□ -1.69
YSF3YNL138W-A LEE1Q02799 301 aaKnown RBP4.5□□□□□ -1.69
YSF3YNL138W-A THI73Q07904 523 aa4.5□□□□□ -1.69
YSF3YNL138W-A YLR040CQ07988 224 aa4.5□□□□□ -1.69
YSF3YNL138W-A RTC1Q08281 1341 aa4.49□□□□□ -1.69
YSF3YNL138W-A MET3P08536 511 aa4.49□□□□□ -1.69
YSF3YNL138W-A YKR018CP36114 725 aa4.49□□□□□ -1.69
YSF3YNL138W-A KTR4P38131 464 aa4.49□□□□□ -1.69
YSF3YNL138W-A YBR259WP38338 688 aa4.49□□□□□ -1.69
YSF3YNL138W-A SUL1P38359 859 aa4.49□□□□□ -1.69
YSF3YNL138W-A SIC1P38634 284 aa4.49□□□□□ -1.69
YSF3YNL138W-A MIP6P38760 659 aaKnown RBP4.49□□□□□ -1.69
YSF3YNL138W-A MSE1P48525 536 aa4.49□□□□□ -1.69
YSF3YNL138W-A PRP31P49704 494 aaPredicted RBP4.49□□□□□ -1.69
YSF3YNL138W-A PCL10P53124 433 aa4.49□□□□□ -1.69
YSF3YNL138W-A YBP2P53169 641 aa4.49□□□□□ -1.69
YSF3YNL138W-A ADE16P54113 591 aaKnown RBP4.49□□□□□ -1.69
YSF3YNL138W-A ORC4P54791 529 aa4.49□□□□□ -1.69
YSF3YNL138W-A DLT1Q04216 342 aa4.49□□□□□ -1.69
YSF3YNL138W-A PUS9Q12069 462 aa4.49□□□□□ -1.69
YSF3YNL138W-A CAF20P12962 161 aaKnown RBP4.48□□□□□ -1.69
YSF3YNL138W-A ADE2P21264 571 aaKnown RBP4.48□□□□□ -1.69
YSF3YNL138W-A MNN4P36044 1178 aa4.48□□□□□ -1.69
YSF3YNL138W-A ELO3P40319 345 aa4.48□□□□□ -1.69
YSF3YNL138W-A RPO41P13433 1351 aaKnown RBP4.48□□□□□ -1.69
YSF3YNL138W-A YHR112CP38716 378 aa4.47□□□□□ -1.69
YSF3YNL138W-A YJR096WP47137 282 aa4.47□□□□□ -1.69
YSF3YNL138W-A TEX1P53851 422 aaKnown RBP4.47□□□□□ -1.69
YSF3YNL138W-A YOL073CQ08232 322 aa4.47□□□□□ -1.69
YSF3YNL138W-A FRE5Q08908 694 aa4.47□□□□□ -1.69
YSF3YNL138W-A YLL066CQ99208 1374 aa4.47□□□□□ -1.69
YSF3YNL138W-A PMD1P32634 1753 aa4.46□□□□□ -1.7
YSF3YNL138W-A ALG7P07286 448 aa4.46□□□□□ -1.7
YSF3YNL138W-A RPS24AP0CX31 135 aaKnown RBP4.46□□□□□ -1.7
YSF3YNL138W-A RPS24BP0CX32 135 aaKnown RBP4.46□□□□□ -1.7
YSF3YNL138W-A SMY1P32364 656 aaKnown RBP4.46□□□□□ -1.7
YSF3YNL138W-A YBR053CP38235 358 aa4.46□□□□□ -1.7
YSF3YNL138W-A BRE5P53741 515 aaKnown RBP4.46□□□□□ -1.7
YSF3YNL138W-A ARG5,6Q01217 863 aa4.46□□□□□ -1.7
YSF3YNL138W-A RNT1Q02555 471 aa4.46□□□□□ -1.7
YSF3YNL138W-A DCS2Q12123 353 aa4.46□□□□□ -1.7
YSF3YNL138W-A NUP145P49687 1317 aa4.46□□□□□ -1.7
YSF3YNL138W-A YLL067CQ07888 1374 aa4.45□□□□□ -1.7
YSF3YNL138W-A ERG6P25087 383 aaKnown RBP4.45□□□□□ -1.7
YSF3YNL138W-A ICL1P28240 557 aaPredicted RBP4.45□□□□□ -1.7
YSF3YNL138W-A PRP19P32523 503 aaKnown RBP4.45□□□□□ -1.7
YSF3YNL138W-A CHS7P38843 316 aa4.45□□□□□ -1.7
YSF3YNL138W-A CKB2P38930 258 aa4.45□□□□□ -1.7
YSF3YNL138W-A YIR042CP40586 236 aa4.45□□□□□ -1.7
YSF3YNL138W-A AMA1P50082 593 aa4.45□□□□□ -1.7
YSF3YNL138W-A GPG1P53130 126 aa4.45□□□□□ -1.7
YSF3YNL138W-A SLI1P53304 468 aa4.45□□□□□ -1.7
YSF3YNL138W-A UME1Q03010 460 aa4.45□□□□□ -1.7
YSF3YNL138W-A YMR206WQ03695 313 aa4.45□□□□□ -1.7
YSF3YNL138W-A MTQ2Q03920 221 aaPredicted RBP4.45□□□□□ -1.7
YSF3YNL138W-A GSF2Q04697 403 aaKnown RBP4.45□□□□□ -1.7
YSF3YNL138W-A GAD1Q04792 585 aa4.45□□□□□ -1.7
YSF3YNL138W-A TOR1P35169 2470 aa4.45□□□□□ -1.7
YSF3YNL138W-A LAT1P12695 482 aaKnown RBP4.44□□□□□ -1.7
YSF3YNL138W-A APL2P36000 726 aaPredicted RBP4.44□□□□□ -1.7
YSF3YNL138W-A SHC1P39000 512 aa4.44□□□□□ -1.7
YSF3YNL138W-A ECM1P39715 212 aa4.44□□□□□ -1.7
YSF3YNL138W-A HOS4P40480 1083 aa4.44□□□□□ -1.7
YSF3YNL138W-A PMT3P47190 753 aa4.44□□□□□ -1.7
YSF3YNL138W-A MTL1P53214 551 aa4.44□□□□□ -1.7
YSF3YNL138W-A IRC13Q08630 104 aa4.44□□□□□ -1.7
YSF3YNL138W-A SIR4P11978 1358 aa4.43□□□□□ -1.7
YSF3YNL138W-A PPR1P07272 904 aaPredicted RBP4.43□□□□□ -1.7
YSF3YNL138W-A PPS1P38148 807 aa4.43□□□□□ -1.7
YSF3YNL138W-A SSZ1P38788 538 aaKnown RBP4.43□□□□□ -1.7
YSF3YNL138W-A UBP12P39538 1254 aa4.43□□□□□ -1.7
YSF3YNL138W-A YGR237CP50089 785 aa4.43□□□□□ -1.7
YSF3YNL138W-A ADY4Q05955 493 aa4.43□□□□□ -1.7
YSF3YNL138W-A MCM21Q06675 368 aa4.43□□□□□ -1.7
YSF3YNL138W-A CTI6Q08923 506 aa4.43□□□□□ -1.7
YSF3YNL138W-A PNS1Q12412 539 aa4.43□□□□□ -1.7
YSF3YNL138W-A YMR084WA2P2R3 262 aa4.42□□□□□ -1.7
YSF3YNL138W-A HIS7P33734 552 aaKnown RBP4.42□□□□□ -1.7
YSF3YNL138W-A APN2P38207 520 aa4.42□□□□□ -1.7
YSF3YNL138W-A PFF1P38244 976 aa4.42□□□□□ -1.7
YSF3YNL138W-A PAF1P38351 445 aa4.42□□□□□ -1.7
YSF3YNL138W-A TDA3P38758 523 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms