RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	NOP9	P47077	666 aa	Known RBP	5.21	□□□□□ -1.58
VPS71	YML041C	YBP2	P53169	641 aa		5.21	□□□□□ -1.58
VPS71	YML041C	MOT3	P54785	490 aa	Known RBP	5.21	□□□□□ -1.58
VPS71	YML041C	PKH1	Q03407	766 aa		5.21	□□□□□ -1.58
VPS71	YML041C	EIS1	Q05050	843 aa	Known RBP	5.21	□□□□□ -1.58
VPS71	YML041C	COG4	Q06096	861 aa		5.21	□□□□□ -1.58
VPS71	YML041C	VPS36	Q06696	566 aa		5.21	□□□□□ -1.58
VPS71	YML041C	TGL5	Q12043	749 aa		5.21	□□□□□ -1.58
VPS71	YML041C	HRP1	Q99383	534 aa	Known RBP	5.21	□□□□□ -1.58
VPS71	YML041C	ADH4	P10127	382 aa		5.2	□□□□□ -1.58
VPS71	YML041C	MSM1	P22438	575 aa		5.2	□□□□□ -1.58
VPS71	YML041C	PHO3	P24031	467 aa		5.2	□□□□□ -1.58
VPS71	YML041C	SSH4	P32343	579 aa		5.2	□□□□□ -1.58
VPS71	YML041C	MFT1	P33441	392 aa	Known RBP	5.2	□□□□□ -1.58
VPS71	YML041C	TGL1	P34163	548 aa		5.2	□□□□□ -1.58
VPS71	YML041C	SHM2	P37291	469 aa	Known RBP	5.2	□□□□□ -1.58
VPS71	YML041C	POL12	P38121	705 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS71	YML041C	CDS1	P38221	457 aa		5.2	□□□□□ -1.58
VPS71	YML041C	RPP1	P38786	293 aa		5.2	□□□□□ -1.58
VPS71	YML041C	NOC2	P39744	710 aa	Known RBP	5.2	□□□□□ -1.58
VPS71	YML041C	SCS2	P40075	244 aa	Known RBP	5.2	□□□□□ -1.58
VPS71	YML041C	YNL195C	P40168	261 aa		5.2	□□□□□ -1.58
VPS71	YML041C	BAP3	P41815	604 aa		5.2	□□□□□ -1.58
VPS71	YML041C	BIT61	P47041	543 aa		5.2	□□□□□ -1.58
VPS71	YML041C	ECL1	P48235	211 aa		5.2	□□□□□ -1.58
VPS71	YML041C	TRS130	Q03660	1102 aa		5.2	□□□□□ -1.58
VPS71	YML041C	NUR1	Q12066	484 aa		5.2	□□□□□ -1.58
VPS71	YML041C	PRE4	P30657	266 aa		5.19	□□□□□ -1.58
VPS71	YML041C	RPN12	P32496	274 aa		5.19	□□□□□ -1.58
VPS71	YML041C	LYS9	P38999	446 aa		5.19	□□□□□ -1.58
VPS71	YML041C	DUN1	P39009	513 aa		5.19	□□□□□ -1.58
VPS71	YML041C	SPC72	P39723	622 aa		5.19	□□□□□ -1.58
VPS71	YML041C	VPS27	P40343	622 aa	Known RBP	5.19	□□□□□ -1.58
VPS71	YML041C	SAP185	P40856	1058 aa		5.19	□□□□□ -1.58
VPS71	YML041C	TAF4	P50105	388 aa		5.19	□□□□□ -1.58
VPS71	YML041C	MNT2	P53059	558 aa		5.19	□□□□□ -1.58
VPS71	YML041C	PSF3	Q12146	194 aa		5.19	□□□□□ -1.58
VPS71	YML041C	SOD2	P00447	233 aa		5.18	□□□□□ -1.58
VPS71	YML041C	PHO81	P17442	1178 aa		5.18	□□□□□ -1.58
VPS71	YML041C	SEC18	P18759	758 aa	Known RBP	5.18	□□□□□ -1.58
VPS71	YML041C	RNR1	P21524	888 aa	Known RBP	5.18	□□□□□ -1.58
VPS71	YML041C	LST4	P34239	828 aa		5.18	□□□□□ -1.58
VPS71	YML041C	SDS22	P36047	338 aa		5.18	□□□□□ -1.58
VPS71	YML041C	SWD1	P39706	426 aa		5.18	□□□□□ -1.58
VPS71	YML041C	GET2	P40056	285 aa		5.18	□□□□□ -1.58
VPS71	YML041C	IMA5	P40884	581 aa		5.18	□□□□□ -1.58
VPS71	YML041C	ERR3	P42222	437 aa		5.18	□□□□□ -1.58
VPS71	YML041C	PEF1	P53238	335 aa		5.18	□□□□□ -1.58
VPS71	YML041C	YML131W	Q03102	365 aa		5.18	□□□□□ -1.58
VPS71	YML041C	NRG1	Q03125	231 aa		5.18	□□□□□ -1.58
VPS71	YML041C	CDA2	Q06703	312 aa		5.18	□□□□□ -1.58
VPS71	YML041C	ENB1	Q08299	606 aa		5.18	□□□□□ -1.58
VPS71	YML041C	ATG11	Q12527	1178 aa		5.18	□□□□□ -1.58
VPS71	YML041C	VPS5	Q92331	675 aa		5.18	□□□□□ -1.58
VPS71	YML041C	RPS13	P05756	151 aa	Known RBP	5.17	□□□□□ -1.58
VPS71	YML041C	PEX1	P24004	1043 aa		5.17	□□□□□ -1.58
VPS71	YML041C	RMA1	P36001	430 aa	Known RBP	5.17	□□□□□ -1.58
VPS71	YML041C	SAW1	P39735	261 aa		5.17	□□□□□ -1.58
VPS71	YML041C	VID27	P40157	782 aa		5.17	□□□□□ -1.58
VPS71	YML041C	PXA1	P41909	870 aa		5.17	□□□□□ -1.58
VPS71	YML041C	MAD3	P47074	515 aa		5.17	□□□□□ -1.58
VPS71	YML041C	YDL183C	P48569	320 aa		5.17	□□□□□ -1.58
VPS71	YML041C	YNR071C	P53757	342 aa		5.17	□□□□□ -1.58
VPS71	YML041C	TRI1	Q05024	226 aa		5.17	□□□□□ -1.58
VPS71	YML041C	YOR352W	Q08816	343 aa		5.17	□□□□□ -1.58
VPS71	YML041C	VAS1	P07806	1104 aa	Known RBP	5.16	□□□□□ -1.58
VPS71	YML041C	GFA1	P14742	717 aa	Known RBP	5.16	□□□□□ -1.58
VPS71	YML041C	CWH43	P25618	953 aa		5.16	□□□□□ -1.58
VPS71	YML041C	MSH1	P25846	959 aa		5.16	□□□□□ -1.58
VPS71	YML041C	PRM2	P40534	656 aa		5.16	□□□□□ -1.58
VPS71	YML041C	TAF1	P46677	1066 aa		5.16	□□□□□ -1.58
VPS71	YML041C	AVT1	P47082	602 aa		5.16	□□□□□ -1.58
VPS71	YML041C	BUL1	P48524	976 aa		5.16	□□□□□ -1.58
VPS71	YML041C	RGC1	Q06108	1083 aa	Known RBP	5.16	□□□□□ -1.58
VPS71	YML041C	THI22	Q06490	572 aa		5.16	□□□□□ -1.58
VPS71	YML041C	HIM1	Q06674	414 aa		5.16	□□□□□ -1.58
VPS71	YML041C	DBP10	Q12389	995 aa	Known RBP	5.16	□□□□□ -1.58
VPS71	YML041C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
VPS71	YML041C	YLF2	P38746	405 aa		5.15	□□□□□ -1.59
VPS71	YML041C	HOS4	P40480	1083 aa		5.15	□□□□□ -1.59
VPS71	YML041C	SPT20	P50875	604 aa		5.15	□□□□□ -1.59
VPS71	YML041C	RIM8	P53179	542 aa		5.15	□□□□□ -1.59
VPS71	YML041C	MTL1	P53214	551 aa		5.15	□□□□□ -1.59
VPS71	YML041C	ESF2	P53743	316 aa	Known RBP	5.15	□□□□□ -1.59
VPS71	YML041C	PPN1	Q04119	674 aa		5.15	□□□□□ -1.59
VPS71	YML041C	TFC6	Q06339	672 aa		5.15	□□□□□ -1.59
VPS71	YML041C	POM34	Q12445	299 aa		5.15	□□□□□ -1.59
VPS71	YML041C	TRP4	P07285	380 aa	Predicted RBP	5.14	□□□□□ -1.59
VPS71	YML041C	LAT1	P12695	482 aa	Known RBP	5.14	□□□□□ -1.59
VPS71	YML041C	RPA135	P22138	1203 aa	Known RBP	5.14	□□□□□ -1.59
VPS71	YML041C	FRD1	P32614	470 aa	Known RBP	5.14	□□□□□ -1.59
VPS71	YML041C	BEM3	P32873	1128 aa		5.14	□□□□□ -1.59
VPS71	YML041C	SEG2	P34250	1132 aa		5.14	□□□□□ -1.59
VPS71	YML041C	APT2	P36973	181 aa		5.14	□□□□□ -1.59
VPS71	YML041C	APM3	P38153	483 aa		5.14	□□□□□ -1.59
VPS71	YML041C	STT3	P39007	718 aa	Known RBP	5.14	□□□□□ -1.59
VPS71	YML041C	FKH2	P41813	862 aa		5.14	□□□□□ -1.59
VPS71	YML041C	CPR6	P53691	371 aa	Known RBP	5.14	□□□□□ -1.59
VPS71	YML041C	ARC35	P53731	342 aa	Known RBP	5.14	□□□□□ -1.59
VPS71	YML041C	VBA4	Q04602	768 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 70.8 ms