RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	SMC5	Q08204	1093 aa		7.24	□□□□□ -1.25
TSR2	YLR435W	EFT1	P32324	842 aa	Known RBP	7.23	□□□□□ -1.25
TSR2	YLR435W	RME1	P32338	300 aa	Known RBP	7.23	□□□□□ -1.25
TSR2	YLR435W	RPT1	P33299	467 aa	Known RBP	7.23	□□□□□ -1.25
TSR2	YLR435W	RTC4	P53850	401 aa		7.23	□□□□□ -1.25
TSR2	YLR435W	NCS2	P53923	493 aa	Predicted RBP	7.23	□□□□□ -1.25
TSR2	YLR435W	HRQ1	Q05549	1077 aa		7.23	□□□□□ -1.25
TSR2	YLR435W	COQ9	Q05779	260 aa		7.23	□□□□□ -1.25
TSR2	YLR435W	MMR1	Q06324	491 aa		7.23	□□□□□ -1.25
TSR2	YLR435W	HIS4	P00815	799 aa	Known RBP	7.22	□□□□□ -1.25
TSR2	YLR435W	HEM13	P11353	328 aa	Known RBP	7.22	□□□□□ -1.25
TSR2	YLR435W	AIM26	P32858	118 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	ATG19	P35193	415 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	THI80	P35202	319 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	AIM3	P38266	947 aa	Known RBP	7.22	□□□□□ -1.25
TSR2	YLR435W	JHD1	P40034	492 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	FYV10	P40492	516 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	ARK1	P53974	638 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	ROD1	Q02805	837 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	COG8	Q04632	607 aa		7.22	□□□□□ -1.25
TSR2	YLR435W	SWI6	P09959	803 aa		7.21	□□□□□ -1.26
TSR2	YLR435W	TCP1	P12612	559 aa	Known RBP	7.21	□□□□□ -1.26
TSR2	YLR435W	PFK1	P16861	987 aa	Known RBP	7.21	□□□□□ -1.26
TSR2	YLR435W	DBP5	P20449	482 aa	Known RBP	7.21	□□□□□ -1.26
TSR2	YLR435W	YSC84	P32793	468 aa		7.21	□□□□□ -1.26
TSR2	YLR435W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.26	not detected
TSR2	YLR435W	MUK1	Q02866	612 aa		7.21	□□□□□ -1.26
TSR2	YLR435W	FUS2	Q05670	677 aa		7.21	□□□□□ -1.26
TSR2	YLR435W	FUB1	P25659	250 aa		7.2	□□□□□ -1.26
TSR2	YLR435W	CDC15	P27636	974 aa		7.2	□□□□□ -1.26
TSR2	YLR435W	PPS1	P38148	807 aa		7.2	□□□□□ -1.26
TSR2	YLR435W	RSC8	P43609	557 aa	Known RBP	7.2	□□□□□ -1.26
TSR2	YLR435W	TOF1	P53840	1238 aa		7.2	□□□□□ -1.26
TSR2	YLR435W	PEX19	Q07418	342 aa		7.2	□□□□□ -1.26
TSR2	YLR435W	NBA1	Q08229	501 aa	Known RBP	7.2	□□□□□ -1.26
TSR2	YLR435W	ADE4	P04046	510 aa	Known RBP	7.19	□□□□□ -1.26
TSR2	YLR435W	WHI2	P12611	486 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	CKA2	P19454	339 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	ISY1	P21374	235 aa	Predicted RBP	7.19	□□□□□ -1.26
TSR2	YLR435W	MCM3	P24279	971 aa	Known RBP	7.19	□□□□□ -1.26
TSR2	YLR435W	PIC2	P40035	300 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	THI6	P41835	540 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	RIM8	P53179	542 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	RTT102	P53330	157 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	SNO2	P53823	222 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	YDL057W	Q07379	328 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	RSC58	Q07979	502 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	HIF1	Q12373	385 aa		7.19	□□□□□ -1.26
TSR2	YLR435W	GCV2	P49095	1034 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	YNL146W	P53906	100 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	VMS1	Q04311	632 aa	Known RBP	7.18	□□□□□ -1.26
TSR2	YLR435W	EMI2	Q04409	500 aa	Known RBP	7.18	□□□□□ -1.26
TSR2	YLR435W	IES4	Q08561	116 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	YPL216W	Q08964	1102 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	ZPS1	Q12512	249 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	YDR034W-B	Q6Q5X2	51 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	YLR422W	Q06409	1932 aa		7.18	□□□□□ -1.26
TSR2	YLR435W	TAF13	P11747	167 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	ADE2	P21264	571 aa	Known RBP	7.17	□□□□□ -1.26
TSR2	YLR435W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.17	□□□□□ -1.26	not detected
TSR2	YLR435W	TMT1	P32643	299 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	COT1	P32798	439 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	YEL1	P34225	687 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	POA1	P38218	177 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	VID24	P38263	362 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	GIP4	P39732	760 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	NUP82	P40368	713 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	TAF1	P46677	1066 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	MCM6	P53091	1017 aa	Known RBP	7.17	□□□□□ -1.26
TSR2	YLR435W	CUE3	P53137	624 aa	Known RBP	7.17	□□□□□ -1.26
TSR2	YLR435W	HFI1	Q12060	488 aa		7.17	□□□□□ -1.26
TSR2	YLR435W	FOB1	O13329	566 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	TOM70	P07213	617 aa	Known RBP	7.16	□□□□□ -1.26
TSR2	YLR435W	SPS1	P08458	490 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	DAL7	P21826	554 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	RPC53	P25441	422 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	KIP1	P28742	1111 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	BMH1	P29311	267 aa	Known RBP	7.16	□□□□□ -1.26
TSR2	YLR435W	FMP10	P40098	244 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	DJP1	P40564	432 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	MNP1	P53163	194 aa	Predicted RBP	7.16	□□□□□ -1.26
TSR2	YLR435W	TAM41	P53230	385 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	ENV11	P53246	860 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	PNG1	Q02890	363 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	TLG2	Q08144	397 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	MCD1	Q12158	566 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	OSW2	Q12202	724 aa		7.16	□□□□□ -1.26
TSR2	YLR435W	SOD2	P00447	233 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	PRC1	P00729	532 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	SAC6	P32599	642 aa	Known RBP	7.15	□□□□□ -1.26
TSR2	YLR435W	YSC83	P32792	385 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	CSE2	P33308	149 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	ALG3	P38179	458 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	CCZ1	P38273	704 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	BDH2	P39713	417 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	OPT1	P40897	799 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	LAM5	P43560	674 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	VTC2	P43585	828 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	CUL3	P53202	744 aa		7.15	□□□□□ -1.26
TSR2	YLR435W	CAF130	P53280	1122 aa	Predicted RBP	7.15	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms