RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	YMR018W	Q04364	514 aa		7.6	□□□□□ -1.19
AFG2	YLR397C	HCR1	Q05775	265 aa	Known RBP	7.6	□□□□□ -1.19
AFG2	YLR397C	DBP9	Q06218	594 aa	Known RBP	7.6	□□□□□ -1.19
AFG2	YLR397C	MLC2	Q06580	163 aa		7.6	□□□□□ -1.19
AFG2	YLR397C	RSC58	Q07979	502 aa		7.6	□□□□□ -1.19
AFG2	YLR397C	VCX1	Q99385	411 aa		7.6	□□□□□ -1.19
AFG2	YLR397C	MER1	P16523	270 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	SRV2	P17555	526 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	MRPL33	P20084	86 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	DBF2	P22204	572 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	NIP1	P32497	812 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	HBS1	P32769	611 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	TEF4	P36008	412 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	PAM1	P37304	830 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	RDH54	P38086	958 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	YHL008C	P38750	627 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	SSP120	P39931	234 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	FMP10	P40098	244 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	PCI8	P40512	444 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	INP51	P40559	946 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	POL31	P46957	487 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	FMP33	P46998	180 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	BPL1	P48445	690 aa	Predicted RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	RBG2	P53295	368 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	DMA2	P53924	522 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	RTC5	Q12108	567 aa	Known RBP	7.59	□□□□□ -1.19
AFG2	YLR397C	NCA2	Q12374	616 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	SPO21	Q12411	609 aa		7.59	□□□□□ -1.19
AFG2	YLR397C	RPA190	P10964	1664 aa	Known RBP	7.58	□□□□□ -1.2
AFG2	YLR397C	MCD4	P36051	919 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	UIP5	P36137	443 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	ADE17	P38009	592 aa	Known RBP	7.58	□□□□□ -1.2
AFG2	YLR397C	CAB2	P40506	365 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	VTC4	P47075	721 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	TAF6	P53040	516 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	OKP1	P53298	406 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	OSH6	Q02201	448 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	VTI1	Q04338	217 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	DPH6	Q12429	685 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	ARG81	P05085	880 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	KSS1	P14681	368 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	SRB4	P32569	687 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	GLG1	P36143	616 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	YRO2	P38079	344 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	SLX1	P38324	304 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	PMC1	P38929	1173 aa	Predicted RBP	7.58	□□□□□ -1.2
AFG2	YLR397C	MRPS35	P53292	345 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	LSC2	P53312	427 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	PRO2	P54885	456 aa	Known RBP	7.58	□□□□□ -1.2
AFG2	YLR397C	MAK10	Q02197	733 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	SRP1	Q02821	542 aa	Known RBP	7.58	□□□□□ -1.2
AFG2	YLR397C	SMP3	Q04174	516 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	GPI13	Q07830	1017 aa		7.58	□□□□□ -1.2
AFG2	YLR397C	MDM20	Q12387	796 aa	Known RBP	7.58	□□□□□ -1.2
AFG2	YLR397C	HNM1	P19807	563 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	URA4	P20051	364 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	PKC1	P24583	1151 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	PDC6	P26263	563 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	UBP11	P36026	717 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	ECM31	P38122	312 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	MAL31	P38156	614 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	YBP1	P38315	674 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	EPL1	P43572	832 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	EFM5	P53200	248 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	YGR067C	P53243	804 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	SDH1	Q00711	640 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	RPN13	O13563	156 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	RPS3	P05750	240 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	PMS1	P14242	873 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	SIT4	P20604	311 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	REB1	P21538	810 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	SLA1	P32790	1244 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	HES1	P35843	434 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	BAP2	P38084	609 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	OTU2	P38747	307 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	EMW1	P42842	904 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	YGR153W	P48238	217 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	NIT3	P49954	291 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	PIB2	P53191	635 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	ORC4	P54791	529 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	RPT6	Q01939	405 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	ISU1	Q03020	165 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	GFD1	Q04839	188 aa	Known RBP	7.57	□□□□□ -1.2
AFG2	YLR397C	GTB1	Q04924	702 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	PHM6	Q05637	104 aa		7.57	□□□□□ -1.2
AFG2	YLR397C	RPS19A	P07280	144 aa	Known RBP	7.56	□□□□□ -1.2
AFG2	YLR397C	RPS19B	P07281	144 aa	Predicted RBP	7.56	□□□□□ -1.2
AFG2	YLR397C	RPB2	P08518	1224 aa	Known RBP	7.56	□□□□□ -1.2
AFG2	YLR397C	SWI4	P25302	1093 aa	Known RBP	7.56	□□□□□ -1.2
AFG2	YLR397C	ILV6	P25605	309 aa	Known RBP	7.56	□□□□□ -1.2
AFG2	YLR397C	MIF2	P35201	549 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	RRF1	P38771	230 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	JEM1	P40358	645 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	BNA6	P43619	295 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	MIG2	P53035	382 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	RSC4	Q02206	625 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	GCN5	Q03330	439 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	SHE9	Q04172	456 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	EMP46	Q12396	444 aa		7.56	□□□□□ -1.2
AFG2	YLR397C	CDC19	P00549	500 aa	Known RBP	7.56	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms