RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeastyeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOA1YKL213C YPR097WQ06839 1073 aa5.17□□□□□ -1.58
DOA1YKL213C RRP36Q12481 300 aaPredicted RBP5.17□□□□□ -1.58
DOA1YKL213C RPB2P08518 1224 aaKnown RBP5.16□□□□□ -1.58
DOA1YKL213C MSD1P15179 658 aaKnown RBP5.16□□□□□ -1.58
DOA1YKL213C STE11P23561 717 aa5.16□□□□□ -1.58
DOA1YKL213C XRS2P33301 854 aa5.16□□□□□ -1.58
DOA1YKL213C TRM2P33753 639 aa5.16□□□□□ -1.58
DOA1YKL213C SLX1P38324 304 aa5.16□□□□□ -1.58
DOA1YKL213C YHL026CP38740 315 aa5.16□□□□□ -1.58
DOA1YKL213C SSZ1P38788 538 aaKnown RBP5.16□□□□□ -1.58
DOA1YKL213C SIT1P39980 628 aa5.16□□□□□ -1.58
DOA1YKL213C RIC1P40395 1056 aa5.16□□□□□ -1.58
DOA1YKL213C ULI1P43604 169 aa5.16□□□□□ -1.58
DOA1YKL213C SUM1P46676 1062 aa5.16□□□□□ -1.58
DOA1YKL213C ISM1P48526 1002 aa5.16□□□□□ -1.58
DOA1YKL213C MET13P53128 600 aa5.16□□□□□ -1.58
DOA1YKL213C RRP6Q12149 733 aaKnown RBP5.16□□□□□ -1.58
DOA1YKL213C YDL206WQ12424 762 aa5.16□□□□□ -1.58
DOA1YKL213C PRR1P28708 518 aa5.15□□□□□ -1.58
DOA1YKL213C RAD16P31244 790 aa5.15□□□□□ -1.58
DOA1YKL213C CDC3P32457 520 aaKnown RBP5.15□□□□□ -1.58
DOA1YKL213C VPH1P32563 840 aaKnown RBP5.15□□□□□ -1.58
DOA1YKL213C SWH1P35845 1188 aa5.15□□□□□ -1.58
DOA1YKL213C ALT2P52892 507 aa5.15□□□□□ -1.58
DOA1YKL213C RPA49Q01080 415 aaPredicted RBP5.15□□□□□ -1.58
DOA1YKL213C TBF1Q02457 562 aa5.15□□□□□ -1.58
DOA1YKL213C RNT1Q02555 471 aa5.15□□□□□ -1.58
DOA1YKL213C UME1Q03010 460 aa5.15□□□□□ -1.58
DOA1YKL213C YMR111CQ04461 462 aaPredicted RBP5.15□□□□□ -1.58
DOA1YKL213C RGA2Q06407 1009 aa5.15□□□□□ -1.58
DOA1YKL213C YLR352WQ06479 807 aa5.15□□□□□ -1.58
DOA1YKL213C YPR078CQ06813 372 aa5.15□□□□□ -1.58
DOA1YKL213C YPL191CQ08930 360 aa5.15□□□□□ -1.58
DOA1YKL213C RIO1Q12196 484 aaKnown RBP5.15□□□□□ -1.58
DOA1YKL213C SLP1Q12232 587 aa5.15□□□□□ -1.58
DOA1YKL213C WHI5Q12416 295 aa5.15□□□□□ -1.58
DOA1YKL213C GIS3Q12418 502 aa5.15□□□□□ -1.58
DOA1YKL213C SEC39Q12745 709 aa5.15□□□□□ -1.58
DOA1YKL213C YBL111CQ3E7Y5 667 aa5.15□□□□□ -1.58
DOA1YKL213C ASP3-2P0CX77 362 aa5.15□□□□□ -1.59
DOA1YKL213C ASP3-3P0CX78 362 aa5.15□□□□□ -1.59
DOA1YKL213C ASP3-4P0CX79 362 aa5.15□□□□□ -1.59
DOA1YKL213C ASP3-1P0CZ17 362 aa5.15□□□□□ -1.59
DOA1YKL213C TIF1P10081 395 aaKnown RBP5.15□□□□□ -1.59
DOA1YKL213C CYC8P14922 966 aa5.15□□□□□ -1.59
DOA1YKL213C SEN2P16658 377 aa5.15□□□□□ -1.59
DOA1YKL213C IME1P21190 360 aa5.15□□□□□ -1.59
DOA1YKL213C KIP1P28742 1111 aa5.15□□□□□ -1.59
DOA1YKL213C UBP14P38237 781 aaKnown RBP5.15□□□□□ -1.59
DOA1YKL213C KIC1P38692 1080 aa5.15□□□□□ -1.59
DOA1YKL213C YER186CP40101 306 aa5.15□□□□□ -1.59
DOA1YKL213C DAS1P47005 663 aa5.15□□□□□ -1.59
DOA1YKL213C IST1P53843 298 aaPredicted RBP5.15□□□□□ -1.59
DOA1YKL213C ESBP6P53918 673 aa5.15□□□□□ -1.59
DOA1YKL213C ALG11P53954 548 aaKnown RBP5.15□□□□□ -1.59
DOA1YKL213C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59 RIP-Chip
DOA1YKL213C NNT1Q05874 261 aa5.15□□□□□ -1.59
DOA1YKL213C YLR455WQ06188 304 aa5.15□□□□□ -1.59
DOA1YKL213C IWR1Q07532 353 aaPredicted RBP5.15□□□□□ -1.59
DOA1YKL213C DAP1Q12091 152 aa5.15□□□□□ -1.59
DOA1YKL213C ATG9Q12142 997 aa5.15□□□□□ -1.59
DOA1YKL213C OSH2Q12451 1283 aa5.15□□□□□ -1.59
DOA1YKL213C PRC1P00729 532 aa5.14□□□□□ -1.59
DOA1YKL213C TUP1P16649 713 aa5.14□□□□□ -1.59
DOA1YKL213C CDC42P19073 191 aa5.14□□□□□ -1.59
DOA1YKL213C CLB1P24868 471 aa5.14□□□□□ -1.59
DOA1YKL213C PGS1P25578 521 aa5.14□□□□□ -1.59
DOA1YKL213C CBF2P32504 956 aa5.14□□□□□ -1.59
DOA1YKL213C RAD54P32863 898 aa5.14□□□□□ -1.59
DOA1YKL213C SMC1P32908 1225 aa5.14□□□□□ -1.59
DOA1YKL213C YKL100CP34248 587 aa5.14□□□□□ -1.59
DOA1YKL213C MRPL40P36534 297 aa5.14□□□□□ -1.59
DOA1YKL213C PTC4P38089 393 aa5.14□□□□□ -1.59
DOA1YKL213C APN2P38207 520 aa5.14□□□□□ -1.59
DOA1YKL213C TIF5P38431 405 aaKnown RBP5.14□□□□□ -1.59
DOA1YKL213C ESL1P40456 1118 aa5.14□□□□□ -1.59
DOA1YKL213C CPR7P47103 393 aa5.14□□□□□ -1.59
DOA1YKL213C YMR1P47147 688 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
DOA1YKL213C TAD1P53065 400 aa5.14□□□□□ -1.59
DOA1YKL213C YNR021WP53723 404 aaKnown RBP5.14□□□□□ -1.59
DOA1YKL213C YDL073WQ07454 984 aa5.14□□□□□ -1.59
DOA1YKL213C APL4Q12028 832 aa5.14□□□□□ -1.59
DOA1YKL213C YOR022CQ12204 715 aa5.14□□□□□ -1.59
DOA1YKL213C PPR1P07272 904 aaPredicted RBP5.14□□□□□ -1.59
DOA1YKL213C RED1P14291 827 aa5.14□□□□□ -1.59
DOA1YKL213C SPO12P17123 173 aa5.14□□□□□ -1.59
DOA1YKL213C RSA4P25382 515 aaKnown RBP5.14□□□□□ -1.59
DOA1YKL213C CSE2P33308 149 aa5.14□□□□□ -1.59
DOA1YKL213C RIM101P33400 625 aa5.14□□□□□ -1.59
DOA1YKL213C STO1P34160 861 aaKnown RBP5.14□□□□□ -1.59
DOA1YKL213C YHR054CP38780 354 aa5.14□□□□□ -1.59
DOA1YKL213C SPC72P39723 622 aa5.14□□□□□ -1.59
DOA1YKL213C YAP5P40574 245 aa5.14□□□□□ -1.59
DOA1YKL213C HOL1P53389 586 aa5.14□□□□□ -1.59
DOA1YKL213C LSC1P53598 329 aaKnown RBP5.14□□□□□ -1.59
DOA1YKL213C YNL034WP53963 612 aa5.14□□□□□ -1.59
DOA1YKL213C YNL018CP53976 612 aa5.14□□□□□ -1.59
DOA1YKL213C ERG5P54781 538 aa5.14□□□□□ -1.59
DOA1YKL213C TFB3Q03290 321 aa5.14□□□□□ -1.59
DOA1YKL213C PPM1Q04081 328 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms