RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C PPR1P07272 904 aaPredicted RBP3.79□□□□□ -1.8
VPS53YJL029C YER152CP10356 443 aa3.79□□□□□ -1.8
VPS53YJL029C MSP1P28737 362 aa3.79□□□□□ -1.8
VPS53YJL029C EFB1P32471 206 aaKnown RBP3.79□□□□□ -1.8
VPS53YJL029C RPN12P32496 274 aa3.79□□□□□ -1.8
VPS53YJL029C RRN6P32786 894 aa3.79□□□□□ -1.8
VPS53YJL029C HXT5P38695 592 aa3.79□□□□□ -1.8
VPS53YJL029C RVS167P39743 482 aaKnown RBP3.79□□□□□ -1.8
VPS53YJL029C MRX6P48564 524 aa3.79□□□□□ -1.8
VPS53YJL029C STB4P50104 949 aa3.79□□□□□ -1.8
VPS53YJL029C UTP8P53276 713 aaKnown RBP3.79□□□□□ -1.8
VPS53YJL029C YPL014WQ02606 381 aa3.79□□□□□ -1.8
VPS53YJL029C YPL062WQ02781 134 aa3.79□□□□□ -1.8
VPS53YJL029C WAR1Q03631 944 aa3.79□□□□□ -1.8
VPS53YJL029C APC11Q12157 165 aa3.79□□□□□ -1.8
VPS53YJL029C ECM3Q99252 613 aa3.79□□□□□ -1.8
VPS53YJL029C CDC37P06101 506 aaKnown RBP3.78□□□□□ -1.8
VPS53YJL029C CDC4P07834 779 aa3.78□□□□□ -1.8
VPS53YJL029C SPO11P23179 398 aa3.78□□□□□ -1.8
VPS53YJL029C PEX1P24004 1043 aa3.78□□□□□ -1.8
VPS53YJL029C SAT4P25333 603 aaKnown RBP3.78□□□□□ -1.8
VPS53YJL029C HEM3P28789 327 aa3.78□□□□□ -1.8
VPS53YJL029C PSO2P30620 661 aa3.78□□□□□ -1.8
VPS53YJL029C HSP78P33416 811 aa3.78□□□□□ -1.8
VPS53YJL029C COY1P34237 679 aa3.78□□□□□ -1.8
VPS53YJL029C CSG2P35206 410 aa3.78□□□□□ -1.8
VPS53YJL029C ECM13P38195 257 aa3.78□□□□□ -1.8
VPS53YJL029C DYS1P38791 387 aa3.78□□□□□ -1.8
VPS53YJL029C FMO1P38866 432 aa3.78□□□□□ -1.8
VPS53YJL029C NUP60P39705 539 aa3.78□□□□□ -1.8
VPS53YJL029C GEM1P39722 662 aa3.78□□□□□ -1.8
VPS53YJL029C HXT8P40886 569 aa3.78□□□□□ -1.8
VPS53YJL029C YGL036WP53185 909 aaPredicted RBP3.78□□□□□ -1.8
VPS53YJL029C LSC2P53312 427 aa3.78□□□□□ -1.8
VPS53YJL029C YNL011CP53980 444 aa3.78□□□□□ -1.8
VPS53YJL029C RPL34AP87262 121 aaPredicted RBP3.78□□□□□ -1.8
VPS53YJL029C TBF1Q02457 562 aa3.78□□□□□ -1.8
VPS53YJL029C MUB1Q03162 620 aa3.78□□□□□ -1.8
VPS53YJL029C PRM6Q04705 352 aa3.78□□□□□ -1.8
VPS53YJL029C BSP1Q06604 576 aa3.78□□□□□ -1.8
VPS53YJL029C YPR084WQ06821 456 aa3.78□□□□□ -1.8
VPS53YJL029C TRE1Q08919 783 aa3.78□□□□□ -1.8
VPS53YJL029C AFT2Q08957 416 aa3.78□□□□□ -1.8
VPS53YJL029C AEP2P22136 580 aa3.78□□□□□ -1.8
VPS53YJL029C PDE1P22434 369 aa3.78□□□□□ -1.8
VPS53YJL029C STE11P23561 717 aa3.78□□□□□ -1.8
VPS53YJL029C RRT12P25381 491 aa3.78□□□□□ -1.8
VPS53YJL029C VBA3P25594 458 aa3.78□□□□□ -1.8
VPS53YJL029C VBA5P36172 582 aa3.78□□□□□ -1.8
VPS53YJL029C AGP2P38090 596 aa3.78□□□□□ -1.8
VPS53YJL029C LSB3P43603 459 aaKnown RBP3.78□□□□□ -1.8
VPS53YJL029C PUS2P53167 370 aa3.78□□□□□ -1.8
VPS53YJL029C BIO5P53744 561 aaKnown RBP3.78□□□□□ -1.8
VPS53YJL029C AIM32Q04689 311 aa3.78□□□□□ -1.8
VPS53YJL029C ECM22Q05958 814 aaPredicted RBP3.78□□□□□ -1.8
VPS53YJL029C RRP15Q06511 250 aaPredicted RBP3.78□□□□□ -1.8
VPS53YJL029C TSR1Q07381 788 aaKnown RBP3.78□□□□□ -1.8
VPS53YJL029C SLX4Q12098 748 aa3.78□□□□□ -1.8
VPS53YJL029C NBP2Q12163 236 aa3.78□□□□□ -1.8
VPS53YJL029C CCH1P50077 2039 aa3.77□□□□□ -1.81
VPS53YJL029C HCM1P25364 564 aa3.77□□□□□ -1.81
VPS53YJL029C SLD2P34252 453 aa3.77□□□□□ -1.81
VPS53YJL029C DUG2P38149 878 aa3.77□□□□□ -1.81
VPS53YJL029C GUF1P46943 645 aa3.77□□□□□ -1.81
VPS53YJL029C HFM1P51979 1187 aa3.77□□□□□ -1.81
VPS53YJL029C NUP84P52891 726 aa3.77□□□□□ -1.81
VPS53YJL029C HOP2P53187 214 aa3.77□□□□□ -1.81
VPS53YJL029C DRN1P53255 507 aaKnown RBP3.77□□□□□ -1.81
VPS53YJL029C HST3P53687 447 aa3.77□□□□□ -1.81
VPS53YJL029C IMP4P53941 290 aaKnown RBP3.77□□□□□ -1.81
VPS53YJL029C TOF2Q02208 771 aa3.77□□□□□ -1.81
VPS53YJL029C HER2Q03557 464 aa3.77□□□□□ -1.81
VPS53YJL029C YPR078CQ06813 372 aa3.77□□□□□ -1.81
VPS53YJL029C CLP1Q08685 445 aaPredicted RBP3.77□□□□□ -1.81
VPS53YJL029C NDJ1Q12366 352 aa3.77□□□□□ -1.81
VPS53YJL029C JIP3O13555 125 aa3.77□□□□□ -1.81
VPS53YJL029C GFA1P14742 717 aaKnown RBP3.77□□□□□ -1.81
VPS53YJL029C IME1P21190 360 aa3.77□□□□□ -1.81
VPS53YJL029C MRP4P32902 394 aa3.77□□□□□ -1.81
VPS53YJL029C YBR225WP38321 900 aa3.77□□□□□ -1.81
VPS53YJL029C MIP6P38760 659 aaKnown RBP3.77□□□□□ -1.81
VPS53YJL029C SBE2P42223 864 aaKnown RBP3.77□□□□□ -1.81
VPS53YJL029C PHO86P46956 311 aa3.77□□□□□ -1.81
VPS53YJL029C SFB2P53953 876 aa3.77□□□□□ -1.81
VPS53YJL029C SXM1Q04175 944 aaKnown RBP3.77□□□□□ -1.81
VPS53YJL029C YOL075CQ08234 1294 aa3.77□□□□□ -1.81
VPS53YJL029C YPL216WQ08964 1102 aa3.77□□□□□ -1.81
VPS53YJL029C YPQ1Q12010 308 aa3.77□□□□□ -1.81
VPS53YJL029C FUS1P11710 512 aa3.76□□□□□ -1.81
VPS53YJL029C REV1P12689 985 aa3.76□□□□□ -1.81
VPS53YJL029C EST1P17214 699 aaPredicted RBP3.76□□□□□ -1.81
VPS53YJL029C FPR1P20081 114 aaKnown RBP3.76□□□□□ -1.81
VPS53YJL029C PPH22P23595 377 aa3.76□□□□□ -1.81
VPS53YJL029C SGF29P25554 259 aa3.76□□□□□ -1.81
VPS53YJL029C GPI10P30777 616 aa3.76□□□□□ -1.81
VPS53YJL029C CSE1P33307 960 aa3.76□□□□□ -1.81
VPS53YJL029C YKL097CP34245 136 aa3.76□□□□□ -1.81
VPS53YJL029C SAP190P36123 1033 aa3.76□□□□□ -1.81
VPS53YJL029C PXL1P36166 706 aa3.76□□□□□ -1.81
VPS53YJL029C PCM1P38628 557 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 139.5 ms