RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W POB3Q04636 552 aaKnown RBP2.94□□□□□ -1.94
MSL1YIR009W ATG33Q06485 197 aa2.94□□□□□ -1.94
MSL1YIR009W YLR125WQ12138 136 aa2.94□□□□□ -1.94
MSL1YIR009W ERG11P10614 530 aa2.93□□□□□ -1.94
MSL1YIR009W PHO8P11491 566 aa2.93□□□□□ -1.94
MSL1YIR009W HMG1P12683 1054 aa2.93□□□□□ -1.94
MSL1YIR009W RPA135P22138 1203 aaKnown RBP2.93□□□□□ -1.94
MSL1YIR009W SAT4P25333 603 aaKnown RBP2.93□□□□□ -1.94
MSL1YIR009W PCL2P25693 308 aa2.93□□□□□ -1.94
MSL1YIR009W MSS1P32559 526 aaPredicted RBP2.93□□□□□ -1.94
MSL1YIR009W YPT7P32939 208 aa2.93□□□□□ -1.94
MSL1YIR009W PEX6P33760 1030 aa2.93□□□□□ -1.94
MSL1YIR009W MNN1P39106 762 aa2.93□□□□□ -1.94
MSL1YIR009W DOT6P40059 670 aaKnown RBP2.93□□□□□ -1.94
MSL1YIR009W KHA1P40309 873 aa2.93□□□□□ -1.94
MSL1YIR009W BNA3P47039 444 aaKnown RBP2.93□□□□□ -1.94
MSL1YIR009W YJR039WP47107 1121 aa2.93□□□□□ -1.94
MSL1YIR009W AIM14P53109 570 aa2.93□□□□□ -1.94
MSL1YIR009W NMA2P53204 395 aa2.93□□□□□ -1.94
MSL1YIR009W SEC5P89102 971 aa2.93□□□□□ -1.94
MSL1YIR009W DCS2Q12123 353 aa2.93□□□□□ -1.94
MSL1YIR009W YGR161W-CQ3E744 92 aa2.93□□□□□ -1.94
MSL1YIR009W LAM4P38800 1345 aa2.93□□□□□ -1.94
MSL1YIR009W PGK1P00560 416 aaKnown RBP2.92□□□□□ -1.94
MSL1YIR009W THI4P32318 326 aa2.92□□□□□ -1.94
MSL1YIR009W YMC1P32331 307 aa2.92□□□□□ -1.94
MSL1YIR009W UGP1P32861 499 aaKnown RBP2.92□□□□□ -1.94
MSL1YIR009W YEL1P34225 687 aa2.92□□□□□ -1.94
MSL1YIR009W PCM1P38628 557 aaKnown RBP2.92□□□□□ -1.94
MSL1YIR009W PMC1P38929 1173 aaPredicted RBP2.92□□□□□ -1.94
MSL1YIR009W YIL077CP40508 320 aa2.92□□□□□ -1.94
MSL1YIR009W ASN1P49089 572 aaKnown RBP2.92□□□□□ -1.94
MSL1YIR009W FMP30Q02883 468 aa2.92□□□□□ -1.94
MSL1YIR009W HFD1Q04458 532 aa2.92□□□□□ -1.94
MSL1YIR009W YSH1Q06224 779 aaPredicted RBP2.92□□□□□ -1.94
MSL1YIR009W VPS36Q06696 566 aa2.92□□□□□ -1.94
MSL1YIR009W ISA1Q07821 250 aaPredicted RBP2.92□□□□□ -1.94
MSL1YIR009W RKI1Q12189 258 aa2.92□□□□□ -1.94
MSL1YIR009W POM34Q12445 299 aa2.92□□□□□ -1.94
MSL1YIR009W ADE5,7P07244 802 aaKnown RBP2.91□□□□□ -1.94
MSL1YIR009W APL3P38065 1025 aa2.91□□□□□ -1.94
MSL1YIR009W YHR202WP38887 602 aa2.91□□□□□ -1.94
MSL1YIR009W LTP1P40347 161 aa2.91□□□□□ -1.94
MSL1YIR009W PMT6P42934 759 aa2.91□□□□□ -1.94
MSL1YIR009W YJR142WP47173 342 aa2.91□□□□□ -1.94
MSL1YIR009W SNF12P53628 566 aa2.91□□□□□ -1.94
MSL1YIR009W YFT2Q06676 274 aa2.91□□□□□ -1.94
MSL1YIR009W GIN4Q12263 1142 aa2.91□□□□□ -1.94
MSL1YIR009W ERG20P08524 352 aaKnown RBP2.9□□□□□ -1.95
MSL1YIR009W SFL1P20134 766 aa2.9□□□□□ -1.95
MSL1YIR009W TOM20P35180 183 aa2.9□□□□□ -1.95
MSL1YIR009W COS111P38308 924 aa2.9□□□□□ -1.95
MSL1YIR009W NUG1P40010 520 aaKnown RBP2.9□□□□□ -1.95
MSL1YIR009W GAT1P43574 510 aa2.9□□□□□ -1.95
MSL1YIR009W BIT61P47041 543 aa2.9□□□□□ -1.95
MSL1YIR009W RTS3P53289 263 aa2.9□□□□□ -1.95
MSL1YIR009W GPD1Q00055 391 aaKnown RBP2.9□□□□□ -1.95
MSL1YIR009W YDR179W-AQ03983 463 aa2.9□□□□□ -1.95
MSL1YIR009W ULA1Q12059 462 aa2.9□□□□□ -1.95
MSL1YIR009W TPK2P06245 380 aa2.89□□□□□ -1.95
MSL1YIR009W FRS1P15624 595 aaKnown RBP2.89□□□□□ -1.95
MSL1YIR009W PTP1P25044 335 aa2.89□□□□□ -1.95
MSL1YIR009W NTH1P32356 751 aa2.89□□□□□ -1.95
MSL1YIR009W PET127P32606 800 aa2.89□□□□□ -1.95
MSL1YIR009W BEM4P39011 633 aa2.89□□□□□ -1.95
MSL1YIR009W XBP1P40489 647 aa2.89□□□□□ -1.95
MSL1YIR009W TAX4P47030 604 aa2.89□□□□□ -1.95
MSL1YIR009W NET1P47035 1189 aa2.89□□□□□ -1.95
MSL1YIR009W DIP5P53388 608 aa2.89□□□□□ -1.95
MSL1YIR009W YLR001CQ07895 862 aa2.89□□□□□ -1.95
MSL1YIR009W IZH3Q07959 543 aa2.89□□□□□ -1.95
MSL1YIR009W NTG2Q08214 380 aa2.89□□□□□ -1.95
MSL1YIR009W VHS3Q08438 674 aa2.89□□□□□ -1.95
MSL1YIR009W MDM20Q12387 796 aaKnown RBP2.89□□□□□ -1.95
MSL1YIR009W SSB1P11484 613 aaKnown RBP2.88□□□□□ -1.95
MSL1YIR009W NUP1P20676 1076 aa2.88□□□□□ -1.95
MSL1YIR009W APN1P22936 367 aa2.88□□□□□ -1.95
MSL1YIR009W MBR1P23493 339 aa2.88□□□□□ -1.95
MSL1YIR009W KIN82P25341 720 aa2.88□□□□□ -1.95
MSL1YIR009W IMG2P25642 146 aaPredicted RBP2.88□□□□□ -1.95
MSL1YIR009W YEN1P40028 759 aa2.88□□□□□ -1.95
MSL1YIR009W SSB2P40150 613 aaKnown RBP2.88□□□□□ -1.95
MSL1YIR009W DNM1P54861 757 aa2.88□□□□□ -1.95
MSL1YIR009W NGL2Q03264 515 aaKnown RBP2.88□□□□□ -1.95
MSL1YIR009W UFO1Q04511 668 aa2.88□□□□□ -1.95
MSL1YIR009W ARG7Q04728 441 aa2.88□□□□□ -1.95
MSL1YIR009W ADR1P07248 1323 aa2.88□□□□□ -1.95
MSL1YIR009W STE4P18851 423 aa2.87□□□□□ -1.95
MSL1YIR009W ELF1P36053 145 aa2.87□□□□□ -1.95
MSL1YIR009W HOT13P36078 116 aa2.87□□□□□ -1.95
MSL1YIR009W CCT5P40413 562 aaKnown RBP2.87□□□□□ -1.95
MSL1YIR009W YGL117WP53133 265 aa2.87□□□□□ -1.95
MSL1YIR009W RCR2Q03446 210 aaKnown RBP2.87□□□□□ -1.95
MSL1YIR009W RGT2Q12300 763 aa2.87□□□□□ -1.95
MSL1YIR009W LEU2P04173 364 aaPredicted RBP2.86□□□□□ -1.95
MSL1YIR009W RPS9BP05755 195 aaKnown RBP2.86□□□□□ -1.95
MSL1YIR009W IME1P21190 360 aa2.86□□□□□ -1.95
MSL1YIR009W SEC15P22224 910 aa2.86□□□□□ -1.95
MSL1YIR009W SFP1P32432 683 aa2.86□□□□□ -1.95
MSL1YIR009W GRX4P32642 244 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms