RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C ARC1P46672 376 aaKnown RBP3.74□□□□□ -1.81
SSM4YIL030C YDR239CQ03780 787 aa3.74□□□□□ -1.81
SSM4YIL030C GRX6Q12438 231 aa3.74□□□□□ -1.81
SSM4YIL030C YKL018C-AQ3E7A7 99 aa3.74□□□□□ -1.81
SSM4YIL030C ENO2P00925 437 aaKnown RBP3.74□□□□□ -1.81
SSM4YIL030C YPK1P12688 680 aaKnown RBP3.74□□□□□ -1.81
SSM4YIL030C GCD2P12754 651 aaPredicted RBP3.74□□□□□ -1.81
SSM4YIL030C PUT4P15380 627 aa3.74□□□□□ -1.81
SSM4YIL030C PAM1P37304 830 aaKnown RBP3.74□□□□□ -1.81
SSM4YIL030C YRB2P40517 327 aa3.74□□□□□ -1.81
SSM4YIL030C VPS64Q03944 604 aa3.74□□□□□ -1.81
SSM4YIL030C CIT1P00890 479 aa3.73□□□□□ -1.81
SSM4YIL030C PMS1P14242 873 aa3.73□□□□□ -1.81
SSM4YIL030C PRP6P19735 899 aaPredicted RBP3.73□□□□□ -1.81
SSM4YIL030C SMI1P32566 505 aa3.73□□□□□ -1.81
SSM4YIL030C LRG1P35688 1017 aa3.73□□□□□ -1.81
SSM4YIL030C RRP14P36080 434 aaKnown RBP3.73□□□□□ -1.81
SSM4YIL030C DSS1P39112 969 aa3.73□□□□□ -1.81
SSM4YIL030C EMP47P43555 445 aa3.73□□□□□ -1.81
SSM4YIL030C PSP1P50896 841 aaKnown RBP3.73□□□□□ -1.81
SSM4YIL030C CLD1P53264 445 aa3.73□□□□□ -1.81
SSM4YIL030C SWP1Q02795 286 aa3.73□□□□□ -1.81
SSM4YIL030C YMR027WQ04371 470 aa3.73□□□□□ -1.81
SSM4YIL030C YMR114CQ04471 368 aaKnown RBP3.73□□□□□ -1.81
SSM4YIL030C PHM6Q05637 104 aa3.73□□□□□ -1.81
SSM4YIL030C CSC1Q06538 782 aa3.73□□□□□ -1.81
SSM4YIL030C BDF2Q07442 638 aa3.73□□□□□ -1.81
SSM4YIL030C BRE4Q07660 1125 aa3.73□□□□□ -1.81
SSM4YIL030C APL5Q08951 932 aaKnown RBP3.73□□□□□ -1.81
SSM4YIL030C SCM3Q12334 223 aa3.73□□□□□ -1.81
SSM4YIL030C ENO1P00924 437 aaKnown RBP3.73□□□□□ -1.81
SSM4YIL030C AMS1P22855 1083 aa3.73□□□□□ -1.81
SSM4YIL030C ACH1P32316 526 aa3.73□□□□□ -1.81
SSM4YIL030C KAR9P32526 644 aa3.73□□□□□ -1.81
SSM4YIL030C ATO2P32907 282 aa3.73□□□□□ -1.81
SSM4YIL030C FZO1P38297 855 aa3.73□□□□□ -1.81
SSM4YIL030C VPS45P38932 577 aa3.73□□□□□ -1.81
SSM4YIL030C SOP4P39543 234 aaPredicted RBP3.73□□□□□ -1.81
SSM4YIL030C OAF1P39720 1047 aaPredicted RBP3.73□□□□□ -1.81
SSM4YIL030C SYG1P40528 902 aa3.73□□□□□ -1.81
SSM4YIL030C SGM1P47166 707 aa3.73□□□□□ -1.81
SSM4YIL030C UFO1Q04511 668 aa3.73□□□□□ -1.81
SSM4YIL030C SLD7Q08457 257 aa3.73□□□□□ -1.81
SSM4YIL030C TMA46Q12000 345 aaKnown RBP3.73□□□□□ -1.81
SSM4YIL030C VIK1Q12045 647 aa3.73□□□□□ -1.81
SSM4YIL030C MSH5Q12175 901 aa3.73□□□□□ -1.81
SSM4YIL030C YDR018CQ12185 396 aa3.73□□□□□ -1.81
SSM4YIL030C YUR1P26725 428 aa3.73□□□□□ -1.81
SSM4YIL030C SRB2P34162 210 aa3.73□□□□□ -1.81
SSM4YIL030C SKG1P36169 355 aa3.73□□□□□ -1.81
SSM4YIL030C RRT2P38332 387 aa3.73□□□□□ -1.81
SSM4YIL030C AIM20P40451 204 aa3.73□□□□□ -1.81
SSM4YIL030C BST1P43571 1029 aa3.73□□□□□ -1.81
SSM4YIL030C MRX6P48564 524 aa3.73□□□□□ -1.81
SSM4YIL030C YGL081WP53156 320 aa3.73□□□□□ -1.81
SSM4YIL030C RPA49Q01080 415 aaPredicted RBP3.73□□□□□ -1.81
SSM4YIL030C ESA1Q08649 445 aa3.73□□□□□ -1.81
SSM4YIL030C YOR389WQ08912 624 aa3.73□□□□□ -1.81
SSM4YIL030C RET1P22276 1149 aaKnown RBP3.72□□□□□ -1.81
SSM4YIL030C CMK2P22517 447 aa3.72□□□□□ -1.81
SSM4YIL030C GBP2P25555 427 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SSM4YIL030C ADY2P25613 283 aa3.72□□□□□ -1.81
SSM4YIL030C PAH1P32567 862 aa3.72□□□□□ -1.81
SSM4YIL030C SQT1P35184 431 aa3.72□□□□□ -1.81
SSM4YIL030C RPH1P39956 796 aa3.72□□□□□ -1.81
SSM4YIL030C COS5P47187 383 aa3.72□□□□□ -1.81
SSM4YIL030C IMA1P53051 589 aa3.72□□□□□ -1.81
SSM4YIL030C NNF2P53253 936 aa3.72□□□□□ -1.81
SSM4YIL030C DSE4P53753 1117 aa3.72□□□□□ -1.81
SSM4YIL030C ADI1Q03677 179 aa3.72□□□□□ -1.81
SSM4YIL030C THI7Q05998 598 aa3.72□□□□□ -1.81
SSM4YIL030C LCB4Q12246 624 aa3.72□□□□□ -1.81
SSM4YIL030C ARG80P07249 177 aa3.72□□□□□ -1.81
SSM4YIL030C TOP3P13099 656 aa3.72□□□□□ -1.81
SSM4YIL030C KAR4P25583 335 aa3.72□□□□□ -1.81
SSM4YIL030C YCR015CP25616 317 aa3.72□□□□□ -1.81
SSM4YIL030C GUT2P32191 649 aa3.72□□□□□ -1.81
SSM4YIL030C GYP6P32806 458 aa3.72□□□□□ -1.81
SSM4YIL030C VHC1P38329 1120 aa3.72□□□□□ -1.81
SSM4YIL030C ARN1P38731 627 aa3.72□□□□□ -1.81
SSM4YIL030C MAM33P40513 266 aa3.72□□□□□ -1.81
SSM4YIL030C TFG1P41895 735 aaPredicted RBP3.72□□□□□ -1.81
SSM4YIL030C RSC8P43609 557 aaKnown RBP3.72□□□□□ -1.81
SSM4YIL030C TAH11P47112 604 aa3.72□□□□□ -1.81
SSM4YIL030C USE1P53146 245 aa3.72□□□□□ -1.81
SSM4YIL030C GUP1P53154 560 aa3.72□□□□□ -1.81
SSM4YIL030C TAM41P53230 385 aa3.72□□□□□ -1.81
SSM4YIL030C SED5Q01590 340 aa3.72□□□□□ -1.81
SSM4YIL030C REH1Q06709 432 aa3.72□□□□□ -1.81
SSM4YIL030C DNL4Q08387 944 aaPredicted RBP3.72□□□□□ -1.81
SSM4YIL030C LDB19Q12502 818 aa3.72□□□□□ -1.81
SSM4YIL030C RIM1P32445 135 aaKnown RBP3.72□□□□□ -1.81
SSM4YIL030C CUE2P36075 443 aaKnown RBP3.72□□□□□ -1.81
SSM4YIL030C YBR259WP38338 688 aa3.72□□□□□ -1.81
SSM4YIL030C NUP60P39705 539 aa3.72□□□□□ -1.81
SSM4YIL030C PRE6P40303 254 aaKnown RBP3.72□□□□□ -1.81
SSM4YIL030C TOS3P43637 560 aa3.72□□□□□ -1.81
SSM4YIL030C HLJ1P48353 224 aa3.72□□□□□ -1.81
SSM4YIL030C YPT32P51996 222 aaKnown RBP3.72□□□□□ -1.81
SSM4YIL030C SOL4P53315 255 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 160.6 ms