RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C ZRT2Q12436 422 aa6.52□□□□□ -1.37
YCK1YHR135C PRE10P21242 288 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
YCK1YHR135C RNR1P21524 888 aaKnown RBP6.51□□□□□ -1.37
YCK1YHR135C VAN1P23642 535 aa6.51□□□□□ -1.37
YCK1YHR135C RRT12P25381 491 aa6.51□□□□□ -1.37
YCK1YHR135C SEC21P32074 935 aaKnown RBP6.51□□□□□ -1.37
YCK1YHR135C MOT2P34909 587 aaKnown RBP6.51□□□□□ -1.37
YCK1YHR135C CSG2P35206 410 aa6.51□□□□□ -1.37
YCK1YHR135C MRPL16P38064 232 aa6.51□□□□□ -1.37
YCK1YHR135C RRT2P38332 387 aa6.51□□□□□ -1.37
YCK1YHR135C KAP123P40069 1113 aaKnown RBP6.51□□□□□ -1.37
YCK1YHR135C LCP5P40079 357 aaPredicted RBP6.51□□□□□ -1.37
YCK1YHR135C SBE2P42223 864 aaKnown RBP6.51□□□□□ -1.37
YCK1YHR135C RPC17P47076 161 aa6.51□□□□□ -1.37
YCK1YHR135C RIM8P53179 542 aa6.51□□□□□ -1.37
YCK1YHR135C YDR222WQ04925 415 aa6.51□□□□□ -1.37
YCK1YHR135C AI5_BETAQ9ZZX0 354 aa6.51□□□□□ -1.37
YCK1YHR135C YLR462WO13556 202 aa6.5□□□□□ -1.37
YCK1YHR135C CDC8P00572 216 aa6.5□□□□□ -1.37
YCK1YHR135C RAD1P06777 1100 aa6.5□□□□□ -1.37
YCK1YHR135C FPS1P23900 669 aa6.5□□□□□ -1.37
YCK1YHR135C DPH2P32461 534 aa6.5□□□□□ -1.37
YCK1YHR135C TMT1P32643 299 aa6.5□□□□□ -1.37
YCK1YHR135C GYP6P32806 458 aa6.5□□□□□ -1.37
YCK1YHR135C YHL049CP38722 271 aa6.5□□□□□ -1.37
YCK1YHR135C TDA3P38758 523 aa6.5□□□□□ -1.37
YCK1YHR135C YEL075CP39972 122 aa6.5□□□□□ -1.37
YCK1YHR135C FTR1P40088 404 aa6.5□□□□□ -1.37
YCK1YHR135C YER189WP40104 122 aa6.5□□□□□ -1.37
YCK1YHR135C PSY2P40164 858 aa6.5□□□□□ -1.37
YCK1YHR135C YTA12P40341 825 aa6.5□□□□□ -1.37
YCK1YHR135C YNL320WP42840 284 aa6.5□□□□□ -1.37
YCK1YHR135C YFL064CP43540 174 aa6.5□□□□□ -1.37
YCK1YHR135C ATG36P46983 293 aa6.5□□□□□ -1.37
YCK1YHR135C ZAP1P47043 880 aa6.5□□□□□ -1.37
YCK1YHR135C YGR111WP53265 400 aa6.5□□□□□ -1.37
YCK1YHR135C RPA49Q01080 415 aaPredicted RBP6.5□□□□□ -1.37
YCK1YHR135C SFH1Q06168 426 aa6.5□□□□□ -1.37
YCK1YHR135C ABP140Q08641 628 aaKnown RBP6.5□□□□□ -1.37
YCK1YHR135C YBL111CQ3E7Y5 667 aa6.5□□□□□ -1.37
YCK1YHR135C ECM3Q99252 613 aa6.5□□□□□ -1.37
YCK1YHR135C RPS31P05759 152 aaKnown RBP6.5□□□□□ -1.37
YCK1YHR135C PRP9P19736 530 aaKnown RBP6.5□□□□□ -1.37
YCK1YHR135C RME1P32338 300 aaKnown RBP6.5□□□□□ -1.37
YCK1YHR135C CBR1P38626 284 aaKnown RBP6.5□□□□□ -1.37
YCK1YHR135C DYS1P38791 387 aa6.5□□□□□ -1.37
YCK1YHR135C PHO86P46956 311 aa6.5□□□□□ -1.37
YCK1YHR135C SHE10P53075 577 aa6.5□□□□□ -1.37
YCK1YHR135C DRN1P53255 507 aaKnown RBP6.5□□□□□ -1.37
YCK1YHR135C ECM7Q06200 448 aa6.5□□□□□ -1.37
YCK1YHR135C MET7Q08645 548 aa6.5□□□□□ -1.37
YCK1YHR135C AIM41Q12032 185 aa6.5□□□□□ -1.37
YCK1YHR135C LEU1P07264 779 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C NAT1P12945 854 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C CAP1P28495 268 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C SCD5P34758 872 aa6.49□□□□□ -1.37
YCK1YHR135C MUD2P36084 527 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C NMD5P46970 1048 aa6.49□□□□□ -1.37
YCK1YHR135C ROM1P53046 1155 aa6.49□□□□□ -1.37
YCK1YHR135C BRE5P53741 515 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C TDA9Q04545 1251 aa6.49□□□□□ -1.37
YCK1YHR135C YLR225CQ05948 407 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C APL5Q08951 932 aaKnown RBP6.49□□□□□ -1.37
YCK1YHR135C HIF1Q12373 385 aa6.49□□□□□ -1.37
YCK1YHR135C GIS3Q12418 502 aa6.49□□□□□ -1.37
YCK1YHR135C STB3Q12427 513 aa6.49□□□□□ -1.37
YCK1YHR135C ATG11Q12527 1178 aa6.49□□□□□ -1.37
YCK1YHR135C Q0182Q9ZZW1 134 aa6.49□□□□□ -1.37
YCK1YHR135C AI1P03875 834 aa6.48□□□□□ -1.37
YCK1YHR135C COX4P04037 155 aa6.48□□□□□ -1.37
YCK1YHR135C ASP3-2P0CX77 362 aa6.48□□□□□ -1.37
YCK1YHR135C ASP3-3P0CX78 362 aa6.48□□□□□ -1.37
YCK1YHR135C ASP3-4P0CX79 362 aa6.48□□□□□ -1.37
YCK1YHR135C ASP3-1P0CZ17 362 aa6.48□□□□□ -1.37
YCK1YHR135C WHI2P12611 486 aa6.48□□□□□ -1.37
YCK1YHR135C GPI10P30777 616 aa6.48□□□□□ -1.37
YCK1YHR135C DBF4P32325 704 aa6.48□□□□□ -1.37
YCK1YHR135C GCD6P32501 712 aaKnown RBP6.48□□□□□ -1.37
YCK1YHR135C BCS1P32839 456 aa6.48□□□□□ -1.37
YCK1YHR135C NFU1P32860 256 aa6.48□□□□□ -1.37
YCK1YHR135C LAS1P36146 502 aaPredicted RBP6.48□□□□□ -1.37
YCK1YHR135C MMS4P38257 691 aa6.48□□□□□ -1.37
YCK1YHR135C RGD1P38339 666 aa6.48□□□□□ -1.37
YCK1YHR135C ETP1P38748 585 aaKnown RBP6.48□□□□□ -1.37
YCK1YHR135C MXR1P40029 184 aa6.48□□□□□ -1.37
YCK1YHR135C ASG1P40467 964 aa6.48□□□□□ -1.37
YCK1YHR135C CTK3P46963 296 aaPredicted RBP6.48□□□□□ -1.37
YCK1YHR135C DAS1P47005 663 aa6.48□□□□□ -1.37
YCK1YHR135C ADE4P04046 510 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C KAR3P17119 729 aa6.47□□□□□ -1.37
YCK1YHR135C COX11P19516 300 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C VMA4P22203 233 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C PRR1P28708 518 aa6.47□□□□□ -1.37
YCK1YHR135C PBP2P38151 413 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
YCK1YHR135C OLA1P38219 394 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C SPC72P39723 622 aa6.47□□□□□ -1.37
YCK1YHR135C YMR187CQ03236 431 aa6.47□□□□□ -1.37
YCK1YHR135C MSC2Q03455 724 aa6.47□□□□□ -1.37
YCK1YHR135C YOR059CQ08448 450 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C YOR223WQ12015 292 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms