RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C ECM23Q02710 187 aa3.26□□□□□ -1.89
RPN1YHR027C FCP1Q03254 732 aa3.26□□□□□ -1.89
RPN1YHR027C URH1Q04179 340 aa3.26□□□□□ -1.89
RPN1YHR027C YMR018WQ04364 514 aa3.26□□□□□ -1.89
RPN1YHR027C MLC2Q06580 163 aa3.26□□□□□ -1.89
RPN1YHR027C YLR001CQ07895 862 aa3.26□□□□□ -1.89
RPN1YHR027C YOR111WQ99210 232 aa3.26□□□□□ -1.89
RPN1YHR027C RPL22AP05749 121 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C HMG2P12684 1045 aa3.25□□□□□ -1.89
RPN1YHR027C GLN4P13188 809 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C MSS116P15424 664 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C MEI4P29467 408 aa3.25□□□□□ -1.89
RPN1YHR027C NAM7P30771 971 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C EFT1P32324 842 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C YBL055CP34220 418 aaPredicted RBP3.25□□□□□ -1.89
RPN1YHR027C YET1P35723 206 aa3.25□□□□□ -1.89
RPN1YHR027C BAP2P38084 609 aa3.25□□□□□ -1.89
RPN1YHR027C PPS1P38148 807 aa3.25□□□□□ -1.89
RPN1YHR027C RFC3P38629 340 aa3.25□□□□□ -1.89
RPN1YHR027C RRF1P38771 230 aa3.25□□□□□ -1.89
RPN1YHR027C DDI1P40087 428 aa3.25□□□□□ -1.89
RPN1YHR027C SER33P40510 469 aa3.25□□□□□ -1.89
RPN1YHR027C PCI8P40512 444 aa3.25□□□□□ -1.89
RPN1YHR027C PAC11P40960 533 aa3.25□□□□□ -1.89
RPN1YHR027C YFL066CP43538 392 aa3.25□□□□□ -1.89
RPN1YHR027C BIR1P47134 954 aa3.25□□□□□ -1.89
RPN1YHR027C TRF5P48561 642 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C VAC7P53950 1165 aa3.25□□□□□ -1.89
RPN1YHR027C PTA1Q01329 785 aaPredicted RBP3.25□□□□□ -1.89
RPN1YHR027C SMP3Q04174 516 aa3.25□□□□□ -1.89
RPN1YHR027C BAG7Q12128 409 aa3.25□□□□□ -1.89
RPN1YHR027C SNU23Q12368 194 aaPredicted RBP3.25□□□□□ -1.89
RPN1YHR027C DBP10Q12389 995 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C EMP46Q12396 444 aa3.25□□□□□ -1.89
RPN1YHR027C TRM11Q12463 433 aa3.25□□□□□ -1.89
RPN1YHR027C SPS1P08458 490 aa3.25□□□□□ -1.89
RPN1YHR027C MATALPHA2P0CY08 210 aa3.25□□□□□ -1.89
RPN1YHR027C HMLALPHA2P0CY09 210 aa3.25□□□□□ -1.89
RPN1YHR027C POL3P15436 1097 aa3.25□□□□□ -1.89
RPN1YHR027C SPB1P25582 841 aaPredicted RBP3.25□□□□□ -1.89
RPN1YHR027C ILV6P25605 309 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C RAD24P32641 659 aa3.25□□□□□ -1.89
RPN1YHR027C TEF4P36008 412 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C YKR078WP36158 585 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C YBR032WP38223 100 aa3.25□□□□□ -1.89
RPN1YHR027C ERP5P38819 212 aa3.25□□□□□ -1.89
RPN1YHR027C ERP2P39704 215 aa3.25□□□□□ -1.89
RPN1YHR027C ELP2P42935 788 aa3.25□□□□□ -1.89
RPN1YHR027C STB4P50104 949 aa3.25□□□□□ -1.89
RPN1YHR027C ALD6P54115 500 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C LGE1Q02796 332 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C FDC1Q03034 503 aa3.25□□□□□ -1.89
RPN1YHR027C YPL034WQ03083 165 aa3.25□□□□□ -1.89
RPN1YHR027C BUD22Q04347 519 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C GFD1Q04839 188 aaKnown RBP3.25□□□□□ -1.89
RPN1YHR027C GIC2Q06648 383 aa3.25□□□□□ -1.89
RPN1YHR027C PEX15Q08215 383 aa3.25□□□□□ -1.89
RPN1YHR027C RCN2Q12044 265 aa3.25□□□□□ -1.89
RPN1YHR027C CHO2P05374 869 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C MYO3P36006 1272 aa3.24□□□□□ -1.89
RPN1YHR027C UBP11P36026 717 aa3.24□□□□□ -1.89
RPN1YHR027C GLG1P36143 616 aa3.24□□□□□ -1.89
RPN1YHR027C TDP1P38319 544 aa3.24□□□□□ -1.89
RPN1YHR027C JLP2P40206 208 aa3.24□□□□□ -1.89
RPN1YHR027C NAS6P50086 228 aa3.24□□□□□ -1.89
RPN1YHR027C NUP84P52891 726 aa3.24□□□□□ -1.89
RPN1YHR027C MRPS35P53292 345 aa3.24□□□□□ -1.89
RPN1YHR027C ZRG17P53735 605 aa3.24□□□□□ -1.89
RPN1YHR027C SLT2Q00772 484 aa3.24□□□□□ -1.89
RPN1YHR027C YDR239CQ03780 787 aa3.24□□□□□ -1.89
RPN1YHR027C SVF1Q05515 481 aa3.24□□□□□ -1.89
RPN1YHR027C TOS4Q06266 489 aa3.24□□□□□ -1.89
RPN1YHR027C VIP1Q06685 1146 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C DTD1Q07648 150 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C AFT2Q08957 416 aa3.24□□□□□ -1.89
RPN1YHR027C TMA46Q12000 345 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C YPR022CQ12139 1133 aa3.24□□□□□ -1.89
RPN1YHR027C PGI1P12709 554 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C CLN3P13365 580 aa3.24□□□□□ -1.89
RPN1YHR027C MEF1P25039 761 aa3.24□□□□□ -1.89
RPN1YHR027C GBP2P25555 427 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
RPN1YHR027C CRM1P30822 1084 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C PRP19P32523 503 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C RPT5P33297 434 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C AFR1P33304 620 aa3.24□□□□□ -1.89
RPN1YHR027C LRG1P35688 1017 aa3.24□□□□□ -1.89
RPN1YHR027C MAK5P38112 773 aaPredicted RBP3.24□□□□□ -1.89
RPN1YHR027C ERT1P38140 529 aa3.24□□□□□ -1.89
RPN1YHR027C CTM1P38818 585 aa3.24□□□□□ -1.89
RPN1YHR027C EDC3P39998 551 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C YIL077CP40508 320 aa3.24□□□□□ -1.89
RPN1YHR027C EMW1P42842 904 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C YJL181WP46987 611 aa3.24□□□□□ -1.89
RPN1YHR027C BPL1P48445 690 aaPredicted RBP3.24□□□□□ -1.89
RPN1YHR027C MIG2P53035 382 aa3.24□□□□□ -1.89
RPN1YHR027C ARX1Q03862 593 aaKnown RBP3.24□□□□□ -1.89
RPN1YHR027C ADY3Q07732 790 aa3.24□□□□□ -1.89
RPN1YHR027C GAS4Q08271 471 aa3.24□□□□□ -1.89
RPN1YHR027C RUP1Q12242 671 aa3.24□□□□□ -1.89
RPN1YHR027C ERP4Q12450 207 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms