RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W SRP101P32916 621 aa2.54□□□□□ -2
CBF2YGR140W DHR2P36009 735 aaPredicted RBP2.54□□□□□ -2
CBF2YGR140W NPR3P38742 1146 aa2.54□□□□□ -2
CBF2YGR140W PUG1P40100 303 aa2.54□□□□□ -2
CBF2YGR140W RIC1P40395 1056 aa2.54□□□□□ -2
CBF2YGR140W LYS5P50113 272 aa2.54□□□□□ -2
CBF2YGR140W BSC5P53755 489 aa2.54□□□□□ -2
CBF2YGR140W NAM8Q00539 523 aaKnown RBP2.54□□□□□ -2
CBF2YGR140W GCR2Q01722 534 aa2.54□□□□□ -2
CBF2YGR140W PPN1Q04119 674 aa2.54□□□□□ -2
CBF2YGR140W YLR302CO13544 120 aa2.54□□□□□ -2
CBF2YGR140W SNF1P06782 633 aaKnown RBP2.54□□□□□ -2
CBF2YGR140W SEC53P07283 254 aaKnown RBP2.54□□□□□ -2
CBF2YGR140W HSF1P10961 833 aa2.54□□□□□ -2
CBF2YGR140W ADP1P25371 1049 aa2.54□□□□□ -2
CBF2YGR140W APL1P27351 700 aa2.54□□□□□ -2
CBF2YGR140W GCD7P32502 381 aaPredicted RBP2.54□□□□□ -2
CBF2YGR140W YLF2P38746 405 aa2.54□□□□□ -2
CBF2YGR140W YER010CP40011 234 aa2.54□□□□□ -2
CBF2YGR140W CTF18P49956 741 aa2.54□□□□□ -2
CBF2YGR140W COX18P53239 316 aa2.54□□□□□ -2
CBF2YGR140W HDA1P53973 706 aa2.54□□□□□ -2
CBF2YGR140W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
CBF2YGR140W YLR407WQ06070 228 aa2.54□□□□□ -2
CBF2YGR140W IWR1Q07532 353 aaPredicted RBP2.54□□□□□ -2
CBF2YGR140W YOR111WQ99210 232 aa2.54□□□□□ -2
CBF2YGR140W NHA1Q99271 985 aa2.54□□□□□ -2
CBF2YGR140W RPS4AP0CX35 261 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W RPS4BP0CX36 261 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W BET2P20133 325 aa2.53□□□□□ -2
CBF2YGR140W ACE2P21192 770 aa2.53□□□□□ -2
CBF2YGR140W IMG2P25642 146 aaPredicted RBP2.53□□□□□ -2
CBF2YGR140W BRF1P29056 596 aa2.53□□□□□ -2
CBF2YGR140W SSZ1P38788 538 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W CCT3P39077 534 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W CAB2P40506 365 aa2.53□□□□□ -2
CBF2YGR140W IMA5P40884 581 aa2.53□□□□□ -2
CBF2YGR140W ROG3P43602 733 aa2.53□□□□□ -2
CBF2YGR140W IRC6P43615 237 aa2.53□□□□□ -2
CBF2YGR140W RMD8P43620 662 aa2.53□□□□□ -2
CBF2YGR140W RPS0BP46654 252 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W SET2P46995 733 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W HFM1P51979 1187 aa2.53□□□□□ -2
CBF2YGR140W YML6P51998 286 aa2.53□□□□□ -2
CBF2YGR140W OGG1P53397 376 aaPredicted RBP2.53□□□□□ -2
CBF2YGR140W ARP9Q05123 467 aa2.53□□□□□ -2
CBF2YGR140W RGA2Q06407 1009 aa2.53□□□□□ -2
CBF2YGR140W IMH1Q06704 911 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W VHS3Q08438 674 aa2.53□□□□□ -2
CBF2YGR140W LYS21Q12122 440 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W STF1P01098 86 aa2.53□□□□□ -2
CBF2YGR140W RAS1P01119 309 aa2.53□□□□□ -2
CBF2YGR140W CTT1P06115 562 aa2.53□□□□□ -2
CBF2YGR140W PDC5P16467 563 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W SIR1P21691 654 aa2.53□□□□□ -2
CBF2YGR140W SEC15P22224 910 aa2.53□□□□□ -2
CBF2YGR140W RIT1P23796 513 aa2.53□□□□□ -2
CBF2YGR140W SGF29P25554 259 aa2.53□□□□□ -2
CBF2YGR140W SRO9P25567 434 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W PEP3P27801 918 aa2.53□□□□□ -2
CBF2YGR140W MTH1P35198 433 aa2.53□□□□□ -2
CBF2YGR140W ECM21P38167 1117 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W YBL029WP38201 376 aa2.53□□□□□ -2
CBF2YGR140W STT3P39007 718 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W POP2P39008 433 aa2.53□□□□□ -2
CBF2YGR140W BEM4P39011 633 aa2.53□□□□□ -2
CBF2YGR140W PZF1P39933 429 aa2.53□□□□□ -2
CBF2YGR140W SSY5P47002 699 aa2.53□□□□□ -2
CBF2YGR140W YJL055WP47044 245 aa2.53□□□□□ -2
CBF2YGR140W YGR016WP53209 190 aa2.53□□□□□ -2
CBF2YGR140W ATG21Q02887 496 aa2.53□□□□□ -2
CBF2YGR140W SNO4Q04902 237 aa2.53□□□□□ -2
CBF2YGR140W BRE4Q07660 1125 aa2.53□□□□□ -2
CBF2YGR140W HSP33Q08914 237 aaKnown RBP2.53□□□□□ -2
CBF2YGR140W HSP32Q08992 237 aa2.53□□□□□ -2
CBF2YGR140W HAL9Q12180 1030 aa2.53□□□□□ -2
CBF2YGR140W MET8P15807 274 aa2.52□□□□□ -2.01
CBF2YGR140W NCP1P16603 691 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W SPO16P17122 198 aa2.52□□□□□ -2.01
CBF2YGR140W RPD3P32561 433 aa2.52□□□□□ -2.01
CBF2YGR140W IRC5P43610 853 aa2.52□□□□□ -2.01
CBF2YGR140W UPF3P48412 387 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W EAR1Q03212 550 aa2.52□□□□□ -2.01
CBF2YGR140W RMT2Q03305 412 aa2.52□□□□□ -2.01
CBF2YGR140W YDR341CQ05506 607 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W THI21Q08975 551 aa2.52□□□□□ -2.01
CBF2YGR140W RPS9BP05755 195 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W PYC1P11154 1178 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W CMP2P14747 604 aa2.52□□□□□ -2.01
CBF2YGR140W CKA1P15790 372 aa2.52□□□□□ -2.01
CBF2YGR140W PDX1P16451 410 aa2.52□□□□□ -2.01
CBF2YGR140W SAC6P32599 642 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W ORC2P32833 620 aa2.52□□□□□ -2.01
CBF2YGR140W AIM26P32858 118 aa2.52□□□□□ -2.01
CBF2YGR140W RFC5P38251 354 aa2.52□□□□□ -2.01
CBF2YGR140W IFA38P38286 347 aa2.52□□□□□ -2.01
CBF2YGR140W FSH1P38777 243 aaKnown RBP2.52□□□□□ -2.01
CBF2YGR140W YJR061WP40355 935 aa2.52□□□□□ -2.01
CBF2YGR140W AXL1P40851 1208 aa2.52□□□□□ -2.01
CBF2YGR140W RSM24Q03976 319 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms