RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W SLX4Q12098 748 aa5.66□□□□□ -1.5
CDC43YGL155W WTM2Q12206 467 aa5.66□□□□□ -1.5
CDC43YGL155W PUS1Q12211 544 aaKnown RBP5.66□□□□□ -1.5
CDC43YGL155W ADE3P07245 946 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W GCR1P07261 785 aa5.65□□□□□ -1.5
CDC43YGL155W TUB3P09734 445 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W YML002WP0CF17 737 aa5.65□□□□□ -1.5
CDC43YGL155W YMR085WP0CF18 432 aa5.65□□□□□ -1.5
CDC43YGL155W NAT1P12945 854 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W KAR3P17119 729 aa5.65□□□□□ -1.5
CDC43YGL155W HPR1P17629 752 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W PRP4P20053 465 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W SFL1P20134 766 aa5.65□□□□□ -1.5
CDC43YGL155W DAL2P25335 343 aa5.65□□□□□ -1.5
CDC43YGL155W CDC48P25694 835 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W CAP1P28495 268 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W CDC11P32458 415 aa5.65□□□□□ -1.5
CDC43YGL155W UTR2P32623 467 aa5.65□□□□□ -1.5
CDC43YGL155W MCR1P36060 302 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W REV7P38927 245 aa5.65□□□□□ -1.5
CDC43YGL155W VAB2P40003 282 aa5.65□□□□□ -1.5
CDC43YGL155W RGD2P43556 714 aa5.65□□□□□ -1.5
CDC43YGL155W HSH155P49955 971 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W INP52P50942 1183 aa5.65□□□□□ -1.5
CDC43YGL155W YML6P51998 286 aa5.65□□□□□ -1.5
CDC43YGL155W TAF6P53040 516 aa5.65□□□□□ -1.5
CDC43YGL155W ZIP2P53061 704 aa5.65□□□□□ -1.5
CDC43YGL155W DRN1P53255 507 aaKnown RBP5.65□□□□□ -1.5
CDC43YGL155W YGR117CP53270 476 aa5.65□□□□□ -1.5
CDC43YGL155W YAF9P53930 226 aa5.65□□□□□ -1.5
CDC43YGL155W COG6P53959 839 aa5.65□□□□□ -1.5
CDC43YGL155W YMR027WQ04371 470 aa5.65□□□□□ -1.5
CDC43YGL155W YDR222WQ04925 415 aa5.65□□□□□ -1.5
CDC43YGL155W IVY1Q04934 453 aa5.65□□□□□ -1.5
CDC43YGL155W TAF9Q05027 157 aa5.65□□□□□ -1.5
CDC43YGL155W HDA3Q06623 655 aa5.65□□□□□ -1.5
CDC43YGL155W IWR1Q07532 353 aaPredicted RBP5.65□□□□□ -1.5
CDC43YGL155W ISA1Q07821 250 aaPredicted RBP5.65□□□□□ -1.5
CDC43YGL155W ACM1Q08981 209 aa5.65□□□□□ -1.5
CDC43YGL155W ILV2P07342 687 aaKnown RBP5.64□□□□□ -1.51
CDC43YGL155W SAM1P10659 382 aaKnown RBP5.64□□□□□ -1.51
CDC43YGL155W CBF2P32504 956 aa5.64□□□□□ -1.51
CDC43YGL155W ABD1P32783 436 aaPredicted RBP5.64□□□□□ -1.51
CDC43YGL155W SWE1P32944 819 aa5.64□□□□□ -1.51
CDC43YGL155W TRM2P33753 639 aa5.64□□□□□ -1.51
CDC43YGL155W OCT1P35999 772 aa5.64□□□□□ -1.51
CDC43YGL155W TVP38P36164 337 aa5.64□□□□□ -1.51
CDC43YGL155W STV1P37296 890 aa5.64□□□□□ -1.51
CDC43YGL155W GLY1P37303 387 aaKnown RBP5.64□□□□□ -1.51
CDC43YGL155W YBR062CP38239 180 aa5.64□□□□□ -1.51
CDC43YGL155W FZO1P38297 855 aa5.64□□□□□ -1.51
CDC43YGL155W ACO2P39533 789 aa5.64□□□□□ -1.51
CDC43YGL155W CPR7P47103 393 aa5.64□□□□□ -1.51
CDC43YGL155W RTT102P53330 157 aa5.64□□□□□ -1.51
CDC43YGL155W VPS72Q03388 795 aa5.64□□□□□ -1.51
CDC43YGL155W MAG2Q06436 670 aaKnown RBP5.64□□□□□ -1.51
CDC43YGL155W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
CDC43YGL155W SEC39Q12745 709 aa5.64□□□□□ -1.51
CDC43YGL155W THS1P04801 734 aaKnown RBP5.63□□□□□ -1.51
CDC43YGL155W CMD1P06787 147 aaKnown RBP5.63□□□□□ -1.51
CDC43YGL155W YER152CP10356 443 aa5.63□□□□□ -1.51
CDC43YGL155W HEM15P16622 393 aa5.63□□□□□ -1.51
CDC43YGL155W MVD1P32377 396 aaKnown RBP5.63□□□□□ -1.51
CDC43YGL155W SSE1P32589 693 aaKnown RBP5.63□□□□□ -1.51
CDC43YGL155W TOA1P32773 286 aa5.63□□□□□ -1.51
CDC43YGL155W SEG2P34250 1132 aa5.63□□□□□ -1.51
CDC43YGL155W SET3P36124 751 aa5.63□□□□□ -1.51
CDC43YGL155W MRX3P38172 270 aa5.63□□□□□ -1.51
CDC43YGL155W HSM3P38348 480 aa5.63□□□□□ -1.51
CDC43YGL155W PCA1P38360 1216 aa5.63□□□□□ -1.51
CDC43YGL155W DYS1P38791 387 aa5.63□□□□□ -1.51
CDC43YGL155W SPC97P38863 823 aa5.63□□□□□ -1.51
CDC43YGL155W ASG1P40467 964 aa5.63□□□□□ -1.51
CDC43YGL155W AIM21P40563 679 aa5.63□□□□□ -1.51
CDC43YGL155W SCD6P45978 349 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
CDC43YGL155W PHO86P46956 311 aa5.63□□□□□ -1.51
CDC43YGL155W HLJ1P48353 224 aa5.63□□□□□ -1.51
CDC43YGL155W UBP15P50101 1230 aa5.63□□□□□ -1.51
CDC43YGL155W ATG1P53104 897 aa5.63□□□□□ -1.51
CDC43YGL155W HOP2P53187 214 aa5.63□□□□□ -1.51
CDC43YGL155W NOG2P53742 486 aaKnown RBP5.63□□□□□ -1.51
CDC43YGL155W CAF120P53836 1060 aa5.63□□□□□ -1.51
CDC43YGL155W KTR5P53966 522 aaPredicted RBP5.63□□□□□ -1.51
CDC43YGL155W ROD1Q02805 837 aa5.63□□□□□ -1.51
CDC43YGL155W TFB2Q02939 513 aa5.63□□□□□ -1.51
CDC43YGL155W CEF1Q03654 590 aaPredicted RBP5.63□□□□□ -1.51
CDC43YGL155W SXM1Q04175 944 aaKnown RBP5.63□□□□□ -1.51
CDC43YGL155W UFO1Q04511 668 aa5.63□□□□□ -1.51
CDC43YGL155W PRM6Q04705 352 aa5.63□□□□□ -1.51
CDC43YGL155W TY1A-BLQ12266 440 aa5.63□□□□□ -1.51
CDC43YGL155W CBF1P17106 351 aa5.62□□□□□ -1.51
CDC43YGL155W COX11P19516 300 aaKnown RBP5.62□□□□□ -1.51
CDC43YGL155W RNR1P21524 888 aaKnown RBP5.62□□□□□ -1.51
CDC43YGL155W AEP2P22136 580 aa5.62□□□□□ -1.51
CDC43YGL155W PUF4P25339 888 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
CDC43YGL155W KAR4P25583 335 aa5.62□□□□□ -1.51
CDC43YGL155W BUD14P27637 709 aa5.62□□□□□ -1.51
CDC43YGL155W STE13P33894 931 aa5.62□□□□□ -1.51
CDC43YGL155W ERC1P38767 581 aa5.62□□□□□ -1.51
CDC43YGL155W SLX8P40072 274 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms