RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W SFL1P20134 766 aa5.12□□□□□ -1.59
RPL28YGL103W MSB1P21339 1137 aaKnown RBP5.12□□□□□ -1.59
RPL28YGL103W VPS34P22543 875 aa5.12□□□□□ -1.59
RPL28YGL103W VPH2P32341 215 aa5.12□□□□□ -1.59
RPL28YGL103W ABD1P32783 436 aaPredicted RBP5.12□□□□□ -1.59
RPL28YGL103W UGA4P32837 571 aa5.12□□□□□ -1.59
RPL28YGL103W AST1P35183 429 aa5.12□□□□□ -1.59
RPL28YGL103W CUE2P36075 443 aaKnown RBP5.12□□□□□ -1.59
RPL28YGL103W SET3P36124 751 aa5.12□□□□□ -1.59
RPL28YGL103W KHA1P40309 873 aa5.12□□□□□ -1.59
RPL28YGL103W RLP7P40693 322 aaKnown RBP5.12□□□□□ -1.59
RPL28YGL103W FAR3P46671 204 aa5.12□□□□□ -1.59
RPL28YGL103W VMA10P48836 114 aaKnown RBP5.12□□□□□ -1.59
RPL28YGL103W UBP15P50101 1230 aa5.12□□□□□ -1.59
RPL28YGL103W LIF1P53150 421 aa5.12□□□□□ -1.59
RPL28YGL103W TAM41P53230 385 aa5.12□□□□□ -1.59
RPL28YGL103W SOL4P53315 255 aa5.12□□□□□ -1.59
RPL28YGL103W IST1P53843 298 aaPredicted RBP5.12□□□□□ -1.59
RPL28YGL103W NOP15P53927 220 aaPredicted RBP5.12□□□□□ -1.59
RPL28YGL103W FMN1Q03778 218 aa5.12□□□□□ -1.59
RPL28YGL103W HMO1Q03973 246 aaKnown RBP5.12□□□□□ -1.59
RPL28YGL103W ERV41Q04651 352 aa5.12□□□□□ -1.59
RPL28YGL103W PHM6Q05637 104 aa5.12□□□□□ -1.59
RPL28YGL103W YSH1Q06224 779 aaPredicted RBP5.12□□□□□ -1.59
RPL28YGL103W IWR1Q07532 353 aaPredicted RBP5.12□□□□□ -1.59
RPL28YGL103W TRE1Q08919 783 aa5.12□□□□□ -1.59
RPL28YGL103W FAP7Q12055 197 aaPredicted RBP5.12□□□□□ -1.59
RPL28YGL103W YDR018CQ12185 396 aa5.12□□□□□ -1.59
RPL28YGL103W TAF3Q12297 353 aa5.12□□□□□ -1.59
RPL28YGL103W SPE4Q12455 300 aa5.12□□□□□ -1.59
RPL28YGL103W FLO11P08640 1367 aa5.12□□□□□ -1.59
RPL28YGL103W ENO1P00924 437 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W RAD10P06838 210 aa5.11□□□□□ -1.59
RPL28YGL103W SBP1P10080 294 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W TIF1P10081 395 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W NAT1P12945 854 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W PDC5P16467 563 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W URA4P20051 364 aa5.11□□□□□ -1.59
RPL28YGL103W RNR1P21524 888 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W SLY1P22213 666 aa5.11□□□□□ -1.59
RPL28YGL103W URA7P28274 579 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W MCM5P29496 775 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W UBP11P36026 717 aa5.11□□□□□ -1.59
RPL28YGL103W ETR1P38071 380 aa5.11□□□□□ -1.59
RPL28YGL103W MSR1P38714 643 aa5.11□□□□□ -1.59
RPL28YGL103W DYS1P38791 387 aa5.11□□□□□ -1.59
RPL28YGL103W SAW1P39735 261 aa5.11□□□□□ -1.59
RPL28YGL103W TMN3P40071 706 aa5.11□□□□□ -1.59
RPL28YGL103W FTR1P40088 404 aa5.11□□□□□ -1.59
RPL28YGL103W DIM1P41819 318 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W PHO86P46956 311 aa5.11□□□□□ -1.59
RPL28YGL103W NOP9P47077 666 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W HLJ1P48353 224 aa5.11□□□□□ -1.59
RPL28YGL103W PAN2P53010 1115 aaPredicted RBP5.11□□□□□ -1.59
RPL28YGL103W MIG2P53035 382 aa5.11□□□□□ -1.59
RPL28YGL103W MRM2P53123 320 aa5.11□□□□□ -1.59
RPL28YGL103W ULP1Q02724 621 aa5.11□□□□□ -1.59
RPL28YGL103W ADE13Q05911 482 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W DUS4Q06063 367 aa5.11□□□□□ -1.59
RPL28YGL103W YET3Q07451 203 aa5.11□□□□□ -1.59
RPL28YGL103W WHI4Q07655 649 aaKnown RBP5.11□□□□□ -1.59
RPL28YGL103W IOC2Q12072 812 aa5.11□□□□□ -1.59
RPL28YGL103W NCR1Q12200 1170 aa5.11□□□□□ -1.59
RPL28YGL103W IES3Q12345 250 aa5.11□□□□□ -1.59
RPL28YGL103W ADF1Q2V2Q1 113 aa5.11□□□□□ -1.59
RPL28YGL103W PHR1P05066 565 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
RPL28YGL103W RPS3P05750 240 aaKnown RBP5.1□□□□□ -1.59
RPL28YGL103W ADE3P07245 946 aaKnown RBP5.1□□□□□ -1.59
RPL28YGL103W ERG12P07277 443 aa5.1□□□□□ -1.59
RPL28YGL103W SEC63P14906 663 aa5.1□□□□□ -1.59
RPL28YGL103W RRT12P25381 491 aa5.1□□□□□ -1.59
RPL28YGL103W ICL1P28240 557 aaPredicted RBP5.1□□□□□ -1.59
RPL28YGL103W RAD14P28519 371 aa5.1□□□□□ -1.59
RPL28YGL103W KAR9P32526 644 aa5.1□□□□□ -1.59
RPL28YGL103W NUF2P33895 451 aa5.1□□□□□ -1.59
RPL28YGL103W SPC42P36094 363 aa5.1□□□□□ -1.59
RPL28YGL103W PHO88P38264 188 aaPredicted RBP5.1□□□□□ -1.59
RPL28YGL103W NUP60P39705 539 aa5.1□□□□□ -1.59
RPL28YGL103W NPP2P39997 493 aa5.1□□□□□ -1.59
RPL28YGL103W SCC4P40090 624 aa5.1□□□□□ -1.59
RPL28YGL103W PRK1P40494 810 aa5.1□□□□□ -1.59
RPL28YGL103W MAM33P40513 266 aa5.1□□□□□ -1.59
RPL28YGL103W MPH1P40562 993 aa5.1□□□□□ -1.59
RPL28YGL103W HKR1P41809 1802 aa5.1□□□□□ -1.59
RPL28YGL103W SAE2P46946 345 aa5.1□□□□□ -1.59
RPL28YGL103W AVT1P47082 602 aa5.1□□□□□ -1.59
RPL28YGL103W CTR1P49573 406 aa5.1□□□□□ -1.59
RPL28YGL103W YGL039WP53183 348 aaKnown RBP5.1□□□□□ -1.59
RPL28YGL103W YGR125WP53273 1036 aa5.1□□□□□ -1.59
RPL28YGL103W ASI1P54074 624 aa5.1□□□□□ -1.59
RPL28YGL103W INP2Q03824 705 aa5.1□□□□□ -1.59
RPL28YGL103W SND1Q04007 877 aa5.1□□□□□ -1.59
RPL28YGL103W YMR074CQ04773 145 aa5.1□□□□□ -1.59
RPL28YGL103W RRP15Q06511 250 aaPredicted RBP5.1□□□□□ -1.59
RPL28YGL103W YPR202WQ08993 238 aa5.1□□□□□ -1.59
RPL28YGL103W DBP10Q12389 995 aaKnown RBP5.1□□□□□ -1.59
RPL28YGL103W SEM1O94742 89 aa5.09□□□□□ -1.59
RPL28YGL103W TEF1P02994 458 aaKnown RBP5.09□□□□□ -1.59
RPL28YGL103W YER152CP10356 443 aa5.09□□□□□ -1.59
RPL28YGL103W MSD1P15179 658 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms