RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	RTK1	Q12100	620 aa	Predicted RBP	3.04	□□□□□ -1.92
YMR31	YFR049W	UPC2	Q12151	913 aa		3.04	□□□□□ -1.92
YMR31	YFR049W	HOS1	Q12214	470 aa		3.04	□□□□□ -1.92
YMR31	YFR049W	YLR122C	Q12312	125 aa		3.04	□□□□□ -1.92
YMR31	YFR049W	DBP10	Q12389	995 aa	Known RBP	3.04	□□□□□ -1.92
YMR31	YFR049W	ERP4	Q12450	207 aa		3.04	□□□□□ -1.92
YMR31	YFR049W	CYC7	P00045	113 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	MIS1	P09440	975 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
YMR31	YFR049W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
YMR31	YFR049W	ADE2	P21264	571 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	SEC15	P22224	910 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	MCM3	P24279	971 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	PET127	P32606	800 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	RPT3	P33298	428 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	XRS2	P33301	854 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	ETP1	P38748	585 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	LAM1	P38851	1228 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	UME6	P39001	836 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	PUG1	P40100	303 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	HOS4	P40480	1083 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	MAD2	P40958	196 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	PXA1	P41909	870 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	SAP4	P53036	818 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	MNT2	P53059	558 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	ARC35	P53731	342 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	REC102	Q02721	264 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	RCR2	Q03446	210 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	EIS1	Q05050	843 aa	Known RBP	3.03	□□□□□ -1.92
YMR31	YFR049W	VPS36	Q06696	566 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	MED1	Q12321	566 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	ATG11	Q12527	1178 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	RTP1	Q12751	981 aa		3.03	□□□□□ -1.92
YMR31	YFR049W	FOB1	O13329	566 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	YLR415C	O13578	112 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	RPS9B	P05755	195 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	SNF1	P06782	633 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	NCP1	P16603	691 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	SAN1	P22470	610 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	YCL049C	P25577	312 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	APL2	P36000	726 aa	Predicted RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	MUD2	P36084	527 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	MRPL36	P36531	177 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	YBR259W	P38338	688 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	STT3	P39007	718 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	SSP120	P39931	234 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	YEL068C	P39977	110 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	CTH1	P47976	325 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	PUS4	P48567	403 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	CPR6	P53691	371 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	YNR071C	P53757	342 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	CBK1	P53894	756 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	ASI2	P53895	289 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	ARG5,6	Q01217	863 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	YPL034W	Q03083	165 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	PLB2	Q03674	706 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	ADY3	Q07732	790 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	GPB1	Q08886	897 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	DIN7	Q12086	430 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	GPR1	Q12361	961 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	LPX1	Q12405	387 aa	Known RBP	3.02	□□□□□ -1.93
YMR31	YFR049W	YPR053C	Q6Q5F3	151 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	VPS5	Q92331	675 aa		3.02	□□□□□ -1.93
YMR31	YFR049W	LEU2	P04173	364 aa	Predicted RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	RPP2A	P05319	106 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	ERG20	P08524	352 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	PCK1	P10963	549 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	GUK1	P15454	187 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	AAC3	P18238	307 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	PRP4	P20053	465 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	IME1	P21190	360 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	PRP22	P24384	1145 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	SWI4	P25302	1093 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	RAD16	P31244	790 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	SEC21	P32074	935 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	PGM1	P33401	570 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	RMA1	P36001	430 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	IFA38	P38286	347 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	YHR112C	P38716	378 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	AXL2	P38928	823 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	CCT3	P39077	534 aa	Known RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	URM1	P40554	99 aa	Predicted RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	BUD8	P41698	603 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	MET12	P46151	657 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	SRB7	P47822	140 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	ACS1	Q01574	713 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	NSE5	Q03718	556 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	PPN1	Q04119	674 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	SGD1	Q06132	899 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	PEX19	Q07418	342 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	IWR1	Q07532	353 aa	Predicted RBP	3.01	□□□□□ -1.93
YMR31	YFR049W	ECM3	Q99252	613 aa		3.01	□□□□□ -1.93
YMR31	YFR049W	URA3	P03962	267 aa		3	□□□□□ -1.93
YMR31	YFR049W	CDC31	P06704	161 aa	Known RBP	3	□□□□□ -1.93
YMR31	YFR049W	HIS5	P07172	385 aa		3	□□□□□ -1.93
YMR31	YFR049W	ADE3	P07245	946 aa	Known RBP	3	□□□□□ -1.93
YMR31	YFR049W	TUB3	P09734	445 aa	Known RBP	3	□□□□□ -1.93
YMR31	YFR049W	MTF2	P10849	440 aa		3	□□□□□ -1.93
YMR31	YFR049W	RNR1	P21524	888 aa	Known RBP	3	□□□□□ -1.93
YMR31	YFR049W	SIR1	P21691	654 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms