RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C NOP13P53883 403 aaKnown RBP RIP-Chip data13.52□□□□□ -0.25not detected
PHO4YFR034C YNL134CP53912 376 aaKnown RBP13.52□□□□□ -0.25
PHO4YFR034C YDR018CQ12185 396 aa13.52□□□□□ -0.25
PHO4YFR034C EMP46Q12396 444 aa13.52□□□□□ -0.25
PHO4YFR034C PUT4P15380 627 aa13.51□□□□□ -0.25
PHO4YFR034C ILV6P25605 309 aaKnown RBP13.51□□□□□ -0.25
PHO4YFR034C DRE2P36152 348 aa13.51□□□□□ -0.25
PHO4YFR034C AGP2P38090 596 aa13.51□□□□□ -0.25
PHO4YFR034C SSP1P38871 571 aa13.51□□□□□ -0.25
PHO4YFR034C RPT2P40327 437 aaKnown RBP13.51□□□□□ -0.25
PHO4YFR034C URB2P47108 1174 aa13.51□□□□□ -0.25
PHO4YFR034C AZR1P50080 613 aa13.51□□□□□ -0.25
PHO4YFR034C KAP95Q06142 861 aaKnown RBP13.51□□□□□ -0.25
PHO4YFR034C AIM39Q08223 395 aa13.51□□□□□ -0.25
PHO4YFR034C TRE1Q08919 783 aa13.51□□□□□ -0.25
PHO4YFR034C GCR1P07261 785 aa13.5□□□□□ -0.25
PHO4YFR034C SLD2P34252 453 aa13.5□□□□□ -0.25
PHO4YFR034C GDT1P38301 280 aaPredicted RBP13.5□□□□□ -0.25
PHO4YFR034C SWC5P38326 303 aa13.5□□□□□ -0.25
PHO4YFR034C UBX7P38349 436 aa13.5□□□□□ -0.25
PHO4YFR034C ALD5P40047 520 aaKnown RBP13.5□□□□□ -0.25
PHO4YFR034C ARG2P40360 574 aa13.5□□□□□ -0.25
PHO4YFR034C TMA108P40462 946 aa13.5□□□□□ -0.25
PHO4YFR034C USA1Q03714 838 aa13.5□□□□□ -0.25
PHO4YFR034C DNL4Q08387 944 aaPredicted RBP13.5□□□□□ -0.25
PHO4YFR034C POL3P15436 1097 aa13.49□□□□□ -0.25
PHO4YFR034C DEP1P31385 405 aa13.49□□□□□ -0.25
PHO4YFR034C OAF3P36023 863 aa13.49□□□□□ -0.25
PHO4YFR034C INP51P40559 946 aaKnown RBP13.49□□□□□ -0.25
PHO4YFR034C RGD2P43556 714 aa13.49□□□□□ -0.25
PHO4YFR034C ASG7P46993 209 aa13.49□□□□□ -0.25
PHO4YFR034C YGR130CP53278 816 aa13.49□□□□□ -0.25
PHO4YFR034C YNL247WP53852 767 aaKnown RBP13.49□□□□□ -0.25
PHO4YFR034C SHR3Q02774 210 aa13.49□□□□□ -0.25
PHO4YFR034C THI7Q05998 598 aa13.49□□□□□ -0.25
PHO4YFR034C MDM20Q12387 796 aaKnown RBP13.49□□□□□ -0.25
PHO4YFR034C RAD26P40352 1085 aa13.48□□□□□ -0.25
PHO4YFR034C TRS85P46944 698 aa13.48□□□□□ -0.25
PHO4YFR034C YGL140CP53120 1219 aa13.48□□□□□ -0.25
PHO4YFR034C PRM6Q04705 352 aa13.48□□□□□ -0.25
PHO4YFR034C DIS3Q08162 1001 aaKnown RBP13.48□□□□□ -0.25
PHO4YFR034C MDM38Q08179 573 aa13.48□□□□□ -0.25
PHO4YFR034C FAP7Q12055 197 aaPredicted RBP13.48□□□□□ -0.25
PHO4YFR034C VPS54Q12071 889 aa13.48□□□□□ -0.25
PHO4YFR034C YRR1Q12172 810 aa13.48□□□□□ -0.25
PHO4YFR034C MAM3Q12296 706 aa13.48□□□□□ -0.25
PHO4YFR034C CBF1P17106 351 aa13.47□□□□□ -0.25
PHO4YFR034C SRB2P34162 210 aa13.47□□□□□ -0.25
PHO4YFR034C ABZ1P37254 787 aaPredicted RBP13.47□□□□□ -0.25
PHO4YFR034C DSE1P40077 573 aa13.47□□□□□ -0.25
PHO4YFR034C YIL054WP40524 105 aa13.47□□□□□ -0.25
PHO4YFR034C MKT1P40850 830 aaKnown RBP13.47□□□□□ -0.25
PHO4YFR034C HLJ1P48353 224 aa13.47□□□□□ -0.25
PHO4YFR034C GCV2P49095 1034 aa13.47□□□□□ -0.25
PHO4YFR034C STB4P50104 949 aa13.47□□□□□ -0.25
PHO4YFR034C ALT2P52892 507 aa13.47□□□□□ -0.25
PHO4YFR034C NCS6P53088 359 aa13.47□□□□□ -0.25
PHO4YFR034C YNL108CP53929 270 aa13.47□□□□□ -0.25
PHO4YFR034C YNL040WP53960 456 aaPredicted RBP13.47□□□□□ -0.25
PHO4YFR034C PIG1Q06216 648 aa13.47□□□□□ -0.25
PHO4YFR034C YOR022CQ12204 715 aa13.47□□□□□ -0.25
PHO4YFR034C RPB2P08518 1224 aaKnown RBP13.46□□□□□ -0.25
PHO4YFR034C SLY1P22213 666 aa13.46□□□□□ -0.25
PHO4YFR034C CYS3P31373 394 aaKnown RBP13.46□□□□□ -0.25
PHO4YFR034C KDX1P36005 433 aa13.46□□□□□ -0.25
PHO4YFR034C TVP23P38962 199 aa13.46□□□□□ -0.25
PHO4YFR034C SAW1P39735 261 aa13.46□□□□□ -0.25
PHO4YFR034C YJL045WP47052 634 aa13.46□□□□□ -0.25
PHO4YFR034C CDC55Q00362 526 aa13.46□□□□□ -0.25
PHO4YFR034C MUB1Q03162 620 aa13.46□□□□□ -0.25
PHO4YFR034C TIF35Q04067 274 aaKnown RBP13.46□□□□□ -0.25
PHO4YFR034C CIR2Q08822 631 aa13.46□□□□□ -0.25
PHO4YFR034C RRD2Q12461 358 aa13.46□□□□□ -0.25
PHO4YFR034C VPS5Q92331 675 aa13.46□□□□□ -0.25
PHO4YFR034C HEM15P16622 393 aa13.45□□□□□ -0.26
PHO4YFR034C RSA4P25382 515 aaKnown RBP13.45□□□□□ -0.26
PHO4YFR034C TPS2P31688 896 aaKnown RBP13.45□□□□□ -0.26
PHO4YFR034C FRE1P32791 686 aa13.45□□□□□ -0.26
PHO4YFR034C PEX2P32800 271 aa13.45□□□□□ -0.26
PHO4YFR034C HEL1P36113 551 aa13.45□□□□□ -0.26
PHO4YFR034C DUG2P38149 878 aa13.45□□□□□ -0.26
PHO4YFR034C YHL026CP38740 315 aa13.45□□□□□ -0.26
PHO4YFR034C RSM26P47141 266 aa13.45□□□□□ -0.26
PHO4YFR034C DUS1P53759 423 aaKnown RBP13.45□□□□□ -0.26
PHO4YFR034C VPS3P23643 1011 aa13.44□□□□□ -0.26
PHO4YFR034C CLB1P24868 471 aa13.44□□□□□ -0.26
PHO4YFR034C YCR051WP25631 222 aa13.44□□□□□ -0.26
PHO4YFR034C MGT1P26188 188 aa13.44□□□□□ -0.26
PHO4YFR034C MEI4P29467 408 aa13.44□□□□□ -0.26
PHO4YFR034C FLC2P39719 783 aa13.44□□□□□ -0.26
PHO4YFR034C ZIP2P53061 704 aa13.44□□□□□ -0.26
PHO4YFR034C ELP3Q02908 557 aaKnown RBP13.44□□□□□ -0.26
PHO4YFR034C CDC73Q06697 393 aa13.44□□□□□ -0.26
PHO4YFR034C MPC54Q08550 464 aa13.44□□□□□ -0.26
PHO4YFR034C CMD1P06787 147 aaKnown RBP13.43□□□□□ -0.26
PHO4YFR034C FUB1P25659 250 aa13.43□□□□□ -0.26
PHO4YFR034C LYS9P38999 446 aa13.43□□□□□ -0.26
PHO4YFR034C COG6P53959 839 aa13.43□□□□□ -0.26
PHO4YFR034C ULP1Q02724 621 aa13.43□□□□□ -0.26
PHO4YFR034C YMR027WQ04371 470 aa13.43□□□□□ -0.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms