RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C FMO1P38866 432 aa3.99□□□□□ -1.77
VAB2YEL005C FMP52P40008 231 aa3.99□□□□□ -1.77
VAB2YEL005C PIG2P40187 538 aa3.99□□□□□ -1.77
VAB2YEL005C VID28P40547 921 aa3.99□□□□□ -1.77
VAB2YEL005C RSC8P43609 557 aaKnown RBP3.99□□□□□ -1.77
VAB2YEL005C BUL1P48524 976 aa3.99□□□□□ -1.77
VAB2YEL005C TAN1P53072 289 aaPredicted RBP3.99□□□□□ -1.77
VAB2YEL005C HOL1P53389 586 aa3.99□□□□□ -1.77
VAB2YEL005C HMO1Q03973 246 aaKnown RBP3.99□□□□□ -1.77
VAB2YEL005C PEX15Q08215 383 aa3.99□□□□□ -1.77
VAB2YEL005C YOL073CQ08232 322 aa3.99□□□□□ -1.77
VAB2YEL005C IRC13Q08630 104 aa3.99□□□□□ -1.77
VAB2YEL005C MCH5Q08777 521 aa3.99□□□□□ -1.77
VAB2YEL005C POM34Q12445 299 aa3.99□□□□□ -1.77
VAB2YEL005C HRP1Q99383 534 aaKnown RBP3.99□□□□□ -1.77
VAB2YEL005C PEX1P24004 1043 aa3.98□□□□□ -1.77
VAB2YEL005C NTH1P32356 751 aa3.98□□□□□ -1.77
VAB2YEL005C PEX2P32800 271 aa3.98□□□□□ -1.77
VAB2YEL005C YHR033WP38690 423 aa3.98□□□□□ -1.77
VAB2YEL005C HOS4P40480 1083 aa3.98□□□□□ -1.77
VAB2YEL005C NOP9P47077 666 aaKnown RBP3.98□□□□□ -1.77
VAB2YEL005C STB4P50104 949 aa3.98□□□□□ -1.77
VAB2YEL005C UBC11P52492 156 aa3.98□□□□□ -1.77
VAB2YEL005C YAP1802P53309 568 aa3.98□□□□□ -1.77
VAB2YEL005C RIA1P53893 1110 aa3.98□□□□□ -1.77
VAB2YEL005C YMR206WQ03695 313 aa3.98□□□□□ -1.77
VAB2YEL005C IRC10Q08118 586 aa3.98□□□□□ -1.77
VAB2YEL005C YKL033W-AQ86ZR7 236 aa3.98□□□□□ -1.77
VAB2YEL005C ABF1P14164 731 aa3.97□□□□□ -1.77
VAB2YEL005C PLC1P32383 869 aa3.97□□□□□ -1.77
VAB2YEL005C FAT1P38225 669 aa3.97□□□□□ -1.77
VAB2YEL005C SFB3P38810 929 aa3.97□□□□□ -1.77
VAB2YEL005C GET2P40056 285 aa3.97□□□□□ -1.77
VAB2YEL005C BAP3P41815 604 aa3.97□□□□□ -1.77
VAB2YEL005C BIT61P47041 543 aa3.97□□□□□ -1.77
VAB2YEL005C YJR008WP47085 338 aa3.97□□□□□ -1.77
VAB2YEL005C TAF4P50105 388 aa3.97□□□□□ -1.77
VAB2YEL005C TEL2P53038 688 aa3.97□□□□□ -1.77
VAB2YEL005C SSL2Q00578 843 aa3.97□□□□□ -1.77
VAB2YEL005C NSE5Q03718 556 aa3.97□□□□□ -1.77
VAB2YEL005C SND1Q04007 877 aa3.97□□□□□ -1.77
VAB2YEL005C YPS7Q06325 596 aa3.97□□□□□ -1.77
VAB2YEL005C OMS1Q06668 471 aa3.97□□□□□ -1.77
VAB2YEL005C VPS36Q06696 566 aa3.97□□□□□ -1.77
VAB2YEL005C HBT1Q07653 1046 aaKnown RBP3.97□□□□□ -1.77
VAB2YEL005C NYV1Q12255 253 aa3.97□□□□□ -1.77
VAB2YEL005C TRM13Q12383 476 aa3.97□□□□□ -1.77
VAB2YEL005C ZRT2Q12436 422 aa3.97□□□□□ -1.77
VAB2YEL005C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
VAB2YEL005C ERG6P25087 383 aaKnown RBP3.96□□□□□ -1.78
VAB2YEL005C CBR1P38626 284 aaKnown RBP3.96□□□□□ -1.78
VAB2YEL005C YHL017WP38745 532 aa3.96□□□□□ -1.78
VAB2YEL005C IES1P43579 692 aa3.96□□□□□ -1.78
VAB2YEL005C PAN2P53010 1115 aaPredicted RBP3.96□□□□□ -1.78
VAB2YEL005C SPO1P53541 631 aa3.96□□□□□ -1.78
VAB2YEL005C SQS1P53866 767 aaKnown RBP3.96□□□□□ -1.78
VAB2YEL005C ACF2Q12168 779 aa3.96□□□□□ -1.78
VAB2YEL005C NDJ1Q12366 352 aa3.96□□□□□ -1.78
VAB2YEL005C PRP28P23394 588 aa3.95□□□□□ -1.78
VAB2YEL005C HIR1P32479 840 aa3.95□□□□□ -1.78
VAB2YEL005C SER1P33330 395 aaKnown RBP3.95□□□□□ -1.78
VAB2YEL005C PPS1P38148 807 aa3.95□□□□□ -1.78
VAB2YEL005C SRP68P38687 599 aaKnown RBP3.95□□□□□ -1.78
VAB2YEL005C PCL5P38794 229 aa3.95□□□□□ -1.78
VAB2YEL005C LYS9P38999 446 aa3.95□□□□□ -1.78
VAB2YEL005C YIL077CP40508 320 aa3.95□□□□□ -1.78
VAB2YEL005C NOP2P40991 618 aaKnown RBP3.95□□□□□ -1.78
VAB2YEL005C RCR2Q03446 210 aaKnown RBP3.95□□□□□ -1.78
VAB2YEL005C THI22Q06490 572 aa3.95□□□□□ -1.78
VAB2YEL005C AFT2Q08957 416 aa3.95□□□□□ -1.78
VAB2YEL005C YEF3P16521 1044 aaKnown RBP3.94□□□□□ -1.78
VAB2YEL005C ACO1P19414 778 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
VAB2YEL005C BCS1P32839 456 aa3.94□□□□□ -1.78
VAB2YEL005C PHO11P35842 467 aa3.94□□□□□ -1.78
VAB2YEL005C COS111P38308 924 aa3.94□□□□□ -1.78
VAB2YEL005C PHO12P38693 467 aa3.94□□□□□ -1.78
VAB2YEL005C SAW1P39735 261 aa3.94□□□□□ -1.78
VAB2YEL005C BUD8P41698 603 aa3.94□□□□□ -1.78
VAB2YEL005C PEX8P53248 589 aa3.94□□□□□ -1.78
VAB2YEL005C MDR1P53258 950 aa3.94□□□□□ -1.78
VAB2YEL005C ECM38Q05902 660 aaPredicted RBP3.94□□□□□ -1.78
VAB2YEL005C STP4Q07351 490 aa3.94□□□□□ -1.78
VAB2YEL005C NGL1Q08213 363 aaKnown RBP3.94□□□□□ -1.78
VAB2YEL005C YOL057WQ08225 711 aa3.94□□□□□ -1.78
VAB2YEL005C AIM41Q12032 185 aa3.94□□□□□ -1.78
VAB2YEL005C SLX4Q12098 748 aa3.94□□□□□ -1.78
VAB2YEL005C CHS5Q12114 671 aaKnown RBP3.94□□□□□ -1.78
VAB2YEL005C MDM10P18409 493 aa3.93□□□□□ -1.78
VAB2YEL005C FEN2P25621 512 aaKnown RBP3.93□□□□□ -1.78
VAB2YEL005C HEM12P32347 362 aaPredicted RBP3.93□□□□□ -1.78
VAB2YEL005C HXT4P32467 576 aa3.93□□□□□ -1.78
VAB2YEL005C NIC96P34077 839 aa3.93□□□□□ -1.78
VAB2YEL005C YAP7Q08182 245 aa3.93□□□□□ -1.78
VAB2YEL005C CWC2Q12046 339 aaPredicted RBP3.93□□□□□ -1.78
VAB2YEL005C CDC26P14724 124 aa3.92□□□□□ -1.78
VAB2YEL005C CDC43P18898 376 aa3.92□□□□□ -1.78
VAB2YEL005C IME1P21190 360 aa3.92□□□□□ -1.78
VAB2YEL005C MF(ALPHA)2P32435 120 aa3.92□□□□□ -1.78
VAB2YEL005C ENP1P38333 483 aaKnown RBP3.92□□□□□ -1.78
VAB2YEL005C ARG2P40360 574 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms