RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W PIG2P40187 538 aa2.91□□□□□ -1.94
VPS52YDR484W PPN1Q04119 674 aa2.91□□□□□ -1.94
VPS52YDR484W RPS9BP05755 195 aaKnown RBP2.9□□□□□ -1.95
VPS52YDR484W PHO11P35842 467 aa2.9□□□□□ -1.95
VPS52YDR484W PHO12P38693 467 aa2.9□□□□□ -1.95
VPS52YDR484W SDS3P40505 327 aa2.9□□□□□ -1.95
VPS52YDR484W PXA1P41909 870 aa2.9□□□□□ -1.95
VPS52YDR484W DUG1P43616 481 aaKnown RBP2.9□□□□□ -1.95
VPS52YDR484W BIT61P47041 543 aa2.9□□□□□ -1.95
VPS52YDR484W FHN1P53279 174 aa2.9□□□□□ -1.95
VPS52YDR484W NOP15P53927 220 aaPredicted RBP2.9□□□□□ -1.95
VPS52YDR484W VPS36Q06696 566 aa2.9□□□□□ -1.95
VPS52YDR484W ICT1Q12385 394 aa2.9□□□□□ -1.95
VPS52YDR484W RPS21BQ3E754 87 aaKnown RBP2.9□□□□□ -1.95
VPS52YDR484W RPS17AP02407 136 aaKnown RBP2.89□□□□□ -1.95
VPS52YDR484W RPS17BP14127 136 aaKnown RBP2.89□□□□□ -1.95
VPS52YDR484W ABF1P14164 731 aa2.89□□□□□ -1.95
VPS52YDR484W CDC43P18898 376 aa2.89□□□□□ -1.95
VPS52YDR484W BCS1P32839 456 aa2.89□□□□□ -1.95
VPS52YDR484W HRB1P38922 454 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
VPS52YDR484W DUN1P39009 513 aa2.89□□□□□ -1.95
VPS52YDR484W ARG2P40360 574 aa2.89□□□□□ -1.95
VPS52YDR484W NDC80P40460 691 aa2.89□□□□□ -1.95
VPS52YDR484W SMX3P54999 86 aaPredicted RBP2.89□□□□□ -1.95
VPS52YDR484W TRE2Q08693 809 aa2.89□□□□□ -1.95
VPS52YDR484W CHS5Q12114 671 aaKnown RBP2.89□□□□□ -1.95
VPS52YDR484W RMP1Q12530 201 aa2.89□□□□□ -1.95
VPS52YDR484W SEC6P32844 805 aa2.89□□□□□ -1.95
VPS52YDR484W YPT7P32939 208 aa2.89□□□□□ -1.95
VPS52YDR484W MTH1P35198 433 aa2.89□□□□□ -1.95
VPS52YDR484W ENP2P48234 707 aaKnown RBP2.89□□□□□ -1.95
VPS52YDR484W CTR1P49573 406 aa2.89□□□□□ -1.95
VPS52YDR484W GND2P53319 492 aa2.89□□□□□ -1.95
VPS52YDR484W ATG4P53867 494 aa2.89□□□□□ -1.95
VPS52YDR484W YPS7Q06325 596 aa2.89□□□□□ -1.95
VPS52YDR484W MDM10P18409 493 aa2.88□□□□□ -1.95
VPS52YDR484W AEP2P22136 580 aa2.88□□□□□ -1.95
VPS52YDR484W FEN2P25621 512 aaKnown RBP2.88□□□□□ -1.95
VPS52YDR484W NTH1P32356 751 aa2.88□□□□□ -1.95
VPS52YDR484W EUG1P32474 517 aa2.88□□□□□ -1.95
VPS52YDR484W YIL077CP40508 320 aa2.88□□□□□ -1.95
VPS52YDR484W RNR4P49723 345 aaKnown RBP2.88□□□□□ -1.95
VPS52YDR484W NSE5Q03718 556 aa2.88□□□□□ -1.95
VPS52YDR484W HOF1Q05080 669 aa2.88□□□□□ -1.95
VPS52YDR484W MLH3Q12083 715 aa2.88□□□□□ -1.95
VPS52YDR484W RPS21AP0C0V8 87 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W SSB1P11484 613 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W GLN4P13188 809 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W THR1P17423 357 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W IME1P21190 360 aa2.87□□□□□ -1.95
VPS52YDR484W KIN3P22209 435 aa2.87□□□□□ -1.95
VPS52YDR484W DMC1P25453 334 aa2.87□□□□□ -1.95
VPS52YDR484W GLG1P36143 616 aa2.87□□□□□ -1.95
VPS52YDR484W COS111P38308 924 aa2.87□□□□□ -1.95
VPS52YDR484W PAF1P38351 445 aa2.87□□□□□ -1.95
VPS52YDR484W GPP2P40106 250 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W SSB2P40150 613 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W BUD8P41698 603 aa2.87□□□□□ -1.95
VPS52YDR484W IES1P43579 692 aa2.87□□□□□ -1.95
VPS52YDR484W TAF4P50105 388 aa2.87□□□□□ -1.95
VPS52YDR484W SPO1P53541 631 aa2.87□□□□□ -1.95
VPS52YDR484W RCR2Q03446 210 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W SKY1Q03656 742 aa2.87□□□□□ -1.95
VPS52YDR484W RGC1Q06108 1083 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W YFT2Q06676 274 aa2.87□□□□□ -1.95
VPS52YDR484W STP4Q07351 490 aa2.87□□□□□ -1.95
VPS52YDR484W MRH1Q12117 320 aaPredicted RBP2.87□□□□□ -1.95
VPS52YDR484W USV1Q12132 391 aa2.87□□□□□ -1.95
VPS52YDR484W GFA1P14742 717 aaKnown RBP2.87□□□□□ -1.95
VPS52YDR484W MRC1P25588 1096 aa2.87□□□□□ -1.95
VPS52YDR484W FAT1P38225 669 aa2.87□□□□□ -1.95
VPS52YDR484W YBR071WP38243 211 aa2.87□□□□□ -1.95
VPS52YDR484W YJL206CP39529 758 aa2.87□□□□□ -1.95
VPS52YDR484W VID28P40547 921 aa2.87□□□□□ -1.95
VPS52YDR484W MPS3P47069 682 aa2.87□□□□□ -1.95
VPS52YDR484W RFX1P48743 811 aa2.87□□□□□ -1.95
VPS52YDR484W YPR027CQ12079 277 aa2.87□□□□□ -1.95
VPS52YDR484W TMA17Q12513 150 aa2.87□□□□□ -1.95
VPS52YDR484W ACO1P19414 778 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
VPS52YDR484W DGR2P32330 852 aa2.86□□□□□ -1.95
VPS52YDR484W CTP1P38152 299 aa2.86□□□□□ -1.95
VPS52YDR484W BDH2P39713 417 aa2.86□□□□□ -1.95
VPS52YDR484W NIT2P47016 307 aa2.86□□□□□ -1.95
VPS52YDR484W SPC105P53148 917 aa2.86□□□□□ -1.95
VPS52YDR484W YGR151CP53287 111 aa2.86□□□□□ -1.95
VPS52YDR484W YDL086WQ07505 273 aa2.86□□□□□ -1.95
VPS52YDR484W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
VPS52YDR484W HCA4P20448 770 aaKnown RBP2.85□□□□□ -1.95
VPS52YDR484W FUB1P25659 250 aa2.85□□□□□ -1.95
VPS52YDR484W MF(ALPHA)2P32435 120 aa2.85□□□□□ -1.95
VPS52YDR484W APL3P38065 1025 aa2.85□□□□□ -1.95
VPS52YDR484W EMP65P40085 556 aa2.85□□□□□ -1.95
VPS52YDR484W KHA1P40309 873 aa2.85□□□□□ -1.95
VPS52YDR484W SLD3P53135 668 aa2.85□□□□□ -1.95
VPS52YDR484W YSH1Q06224 779 aaPredicted RBP2.85□□□□□ -1.95
VPS52YDR484W TAF3Q12297 353 aa2.85□□□□□ -1.95
VPS52YDR484W CDC26P14724 124 aa2.85□□□□□ -1.95
VPS52YDR484W PRE4P30657 266 aa2.85□□□□□ -1.95
VPS52YDR484W DAL3P32459 195 aa2.85□□□□□ -1.95
VPS52YDR484W GMH1P36125 273 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms