RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C TMA10Q06177 86 aa5.41□□□□□ -1.54
RPB7YDR404C YPR027CQ12079 277 aa5.41□□□□□ -1.54
RPB7YDR404C PSK1P31374 1356 aa5.41□□□□□ -1.54
RPB7YDR404C TOM1Q03280 3268 aa5.4□□□□□ -1.54
RPB7YDR404C SPE1P08432 466 aa5.4□□□□□ -1.54
RPB7YDR404C TRX2P22803 104 aaKnown RBP5.4□□□□□ -1.54
RPB7YDR404C EMC1P25574 760 aa5.4□□□□□ -1.54
RPB7YDR404C TRZ1P36159 838 aaPredicted RBP5.4□□□□□ -1.54
RPB7YDR404C FAT1P38225 669 aa5.4□□□□□ -1.54
RPB7YDR404C SSY5P47002 699 aa5.4□□□□□ -1.54
RPB7YDR404C PCL10P53124 433 aa5.4□□□□□ -1.54
RPB7YDR404C UBX4P54730 416 aa5.4□□□□□ -1.54
RPB7YDR404C ARP4P80428 489 aa5.4□□□□□ -1.54
RPB7YDR404C ATG16Q03818 150 aa5.4□□□□□ -1.54
RPB7YDR404C ECM16Q04217 1267 aaKnown RBP5.4□□□□□ -1.54
RPB7YDR404C NOP12Q08208 459 aaKnown RBP5.4□□□□□ -1.54
RPB7YDR404C APM4Q99186 491 aa5.4□□□□□ -1.54
RPB7YDR404C YRF1-3P0CX14 1859 aa5.4□□□□□ -1.55
RPB7YDR404C YRF1-7P0CX15 1859 aa5.4□□□□□ -1.55
RPB7YDR404C YRF1-6P53819 1859 aa5.4□□□□□ -1.55
RPB7YDR404C RAD9P14737 1309 aa5.4□□□□□ -1.55
RPB7YDR404C KCC4P25389 1037 aa5.39□□□□□ -1.55
RPB7YDR404C PTP2P29461 750 aa5.39□□□□□ -1.55
RPB7YDR404C SEC65P29478 273 aa5.39□□□□□ -1.55
RPB7YDR404C MAL31P38156 614 aa5.39□□□□□ -1.55
RPB7YDR404C CTF8P38877 133 aa5.39□□□□□ -1.55
RPB7YDR404C EMP65P40085 556 aa5.39□□□□□ -1.55
RPB7YDR404C YJR039WP47107 1121 aa5.39□□□□□ -1.55
RPB7YDR404C VPS62P53285 467 aa5.39□□□□□ -1.55
RPB7YDR404C CEF1Q03654 590 aaPredicted RBP5.39□□□□□ -1.55
RPB7YDR404C WHI4Q07655 649 aaKnown RBP5.39□□□□□ -1.55
RPB7YDR404C HMI1Q12039 706 aa5.39□□□□□ -1.55
RPB7YDR404C SNF2P22082 1703 aa5.38□□□□□ -1.55
RPB7YDR404C TUB2P02557 457 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C CDC6P09119 513 aa5.38□□□□□ -1.55
RPB7YDR404C PGI1P12709 554 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C STE11P23561 717 aa5.38□□□□□ -1.55
RPB7YDR404C TAF5P38129 798 aa5.38□□□□□ -1.55
RPB7YDR404C SSZ1P38788 538 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C YHR078WP38799 552 aa5.38□□□□□ -1.55
RPB7YDR404C IES5P40060 125 aa5.38□□□□□ -1.55
RPB7YDR404C SDP1P40479 209 aa5.38□□□□□ -1.55
RPB7YDR404C RSC8P43609 557 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C MNN10P50108 393 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C MCM6P53091 1017 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C YGR021WP53212 290 aa5.38□□□□□ -1.55
RPB7YDR404C BRE5P53741 515 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C GSF2Q04697 403 aaKnown RBP5.38□□□□□ -1.55
RPB7YDR404C ECM38Q05902 660 aaPredicted RBP5.38□□□□□ -1.55
RPB7YDR404C YLR224WQ05947 369 aa5.38□□□□□ -1.55
RPB7YDR404C TPO1Q07824 586 aa5.38□□□□□ -1.55
RPB7YDR404C YKU70P32807 602 aa5.37□□□□□ -1.55
RPB7YDR404C LST4P34239 828 aa5.37□□□□□ -1.55
RPB7YDR404C ATG19P35193 415 aa5.37□□□□□ -1.55
RPB7YDR404C YKL133CP36066 463 aa5.37□□□□□ -1.55
RPB7YDR404C MIP6P38760 659 aaKnown RBP5.37□□□□□ -1.55
RPB7YDR404C RRP8P38961 392 aaKnown RBP5.37□□□□□ -1.55
RPB7YDR404C BFA1P47113 574 aa5.37□□□□□ -1.55
RPB7YDR404C VPS72Q03388 795 aa5.37□□□□□ -1.55
RPB7YDR404C ASM4Q05166 528 aa5.37□□□□□ -1.55
RPB7YDR404C MLC2Q06580 163 aa5.37□□□□□ -1.55
RPB7YDR404C PEX15Q08215 383 aa5.37□□□□□ -1.55
RPB7YDR404C RRP6Q12149 733 aaKnown RBP5.37□□□□□ -1.55
RPB7YDR404C SWI6P09959 803 aa5.36□□□□□ -1.55
RPB7YDR404C HCA4P20448 770 aaKnown RBP5.36□□□□□ -1.55
RPB7YDR404C SAK1P38990 1142 aa5.36□□□□□ -1.55
RPB7YDR404C BEM4P39011 633 aa5.36□□□□□ -1.55
RPB7YDR404C MTR3P48240 250 aaPredicted RBP5.36□□□□□ -1.55
RPB7YDR404C RNR4P49723 345 aaKnown RBP5.36□□□□□ -1.55
RPB7YDR404C GPD1Q00055 391 aaKnown RBP5.36□□□□□ -1.55
RPB7YDR404C LEE1Q02799 301 aaKnown RBP5.36□□□□□ -1.55
RPB7YDR404C ADY3Q07732 790 aa5.36□□□□□ -1.55
RPB7YDR404C UPC2Q12151 913 aa5.36□□□□□ -1.55
RPB7YDR404C GPR1Q12361 961 aa5.36□□□□□ -1.55
RPB7YDR404C ATP12P22135 325 aa5.35□□□□□ -1.55
RPB7YDR404C HCM1P25364 564 aa5.35□□□□□ -1.55
RPB7YDR404C STE14P32584 239 aa5.35□□□□□ -1.55
RPB7YDR404C YKR075CP36155 307 aa5.35□□□□□ -1.55
RPB7YDR404C RIM4P38741 713 aa5.35□□□□□ -1.55
RPB7YDR404C URM1P40554 99 aaPredicted RBP5.35□□□□□ -1.55
RPB7YDR404C MET12P46151 657 aa5.35□□□□□ -1.55
RPB7YDR404C EAF6P47128 113 aa5.35□□□□□ -1.55
RPB7YDR404C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
RPB7YDR404C EDE1P34216 1381 aa5.34□□□□□ -1.55
RPB7YDR404C HIS5P07172 385 aa5.34□□□□□ -1.55
RPB7YDR404C PFK1P16861 987 aaKnown RBP5.34□□□□□ -1.55
RPB7YDR404C SED4P25365 1065 aa5.34□□□□□ -1.55
RPB7YDR404C AKL1P38080 1108 aaKnown RBP5.34□□□□□ -1.55
RPB7YDR404C YHR202WP38887 602 aa5.34□□□□□ -1.55
RPB7YDR404C PZF1P39933 429 aa5.34□□□□□ -1.55
RPB7YDR404C HIS6P40545 261 aa5.34□□□□□ -1.55
RPB7YDR404C MUS81Q04149 632 aaPredicted RBP5.34□□□□□ -1.55
RPB7YDR404C ROM2P51862 1356 aaKnown RBP5.33□□□□□ -1.56
RPB7YDR404C GLN4P13188 809 aaKnown RBP5.33□□□□□ -1.56
RPB7YDR404C DPB3P27344 201 aa5.33□□□□□ -1.56
RPB7YDR404C TRM2P33753 639 aa5.33□□□□□ -1.56
RPB7YDR404C KTR4P38131 464 aa5.33□□□□□ -1.56
RPB7YDR404C YHL041WP38730 149 aa5.33□□□□□ -1.56
RPB7YDR404C PLB1P39105 664 aa5.33□□□□□ -1.56
RPB7YDR404C PFA3P42836 336 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms