RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C SAP4P53036 818 aa6.53□□□□□ -1.36
MSS116YDR194C CSR1Q06705 408 aaKnown RBP6.53□□□□□ -1.36
MSS116YDR194C TY1A-NL1Q12391 440 aaKnown RBP6.53□□□□□ -1.36
MSS116YDR194C FUM1P08417 488 aaKnown RBP6.53□□□□□ -1.36
MSS116YDR194C SIR1P21691 654 aa6.53□□□□□ -1.36
MSS116YDR194C SRO9P25567 434 aaKnown RBP6.53□□□□□ -1.36
MSS116YDR194C SET3P36124 751 aa6.53□□□□□ -1.36
MSS116YDR194C YHL012WP38709 493 aa6.53□□□□□ -1.36
MSS116YDR194C YIL108WP40483 696 aaKnown RBP6.53□□□□□ -1.36
MSS116YDR194C ERO1Q03103 563 aa6.53□□□□□ -1.36
MSS116YDR194C SYF1Q04048 859 aaPredicted RBP6.53□□□□□ -1.36
MSS116YDR194C STP4Q07351 490 aa6.53□□□□□ -1.36
MSS116YDR194C IWR1Q07532 353 aaPredicted RBP6.53□□□□□ -1.36
MSS116YDR194C NHA1Q99271 985 aa6.53□□□□□ -1.36
MSS116YDR194C NPL6P32832 435 aa6.52□□□□□ -1.37
MSS116YDR194C PXA2P34230 853 aa6.52□□□□□ -1.37
MSS116YDR194C RMD8P43620 662 aa6.52□□□□□ -1.37
MSS116YDR194C ENP2P48234 707 aaKnown RBP6.52□□□□□ -1.37
MSS116YDR194C YNR071CP53757 342 aa6.52□□□□□ -1.37
MSS116YDR194C PSR1Q07800 427 aa6.52□□□□□ -1.37
MSS116YDR194C RSB1Q08417 382 aa6.52□□□□□ -1.37
MSS116YDR194C FBP1P09201 348 aa6.51□□□□□ -1.37
MSS116YDR194C MIS1P09440 975 aaKnown RBP6.51□□□□□ -1.37
MSS116YDR194C CMP2P14747 604 aa6.51□□□□□ -1.37
MSS116YDR194C TRK2P28584 889 aa6.51□□□□□ -1.37
MSS116YDR194C SET2P46995 733 aaKnown RBP6.51□□□□□ -1.37
MSS116YDR194C NSE5Q03718 556 aa6.51□□□□□ -1.37
MSS116YDR194C UTP21Q06078 939 aaPredicted RBP6.51□□□□□ -1.37
MSS116YDR194C IRC3Q06683 689 aa6.51□□□□□ -1.37
MSS116YDR194C SWI4P25302 1093 aaKnown RBP6.51□□□□□ -1.37
MSS116YDR194C YLF2P38746 405 aa6.51□□□□□ -1.37
MSS116YDR194C ARE2P53629 642 aaKnown RBP6.51□□□□□ -1.37
MSS116YDR194C SNO4Q04902 237 aa6.51□□□□□ -1.37
MSS116YDR194C HSP33Q08914 237 aaKnown RBP6.51□□□□□ -1.37
MSS116YDR194C HSP32Q08992 237 aa6.51□□□□□ -1.37
MSS116YDR194C BET2P20133 325 aa6.5□□□□□ -1.37
MSS116YDR194C SRP101P32916 621 aa6.5□□□□□ -1.37
MSS116YDR194C YBR225WP38321 900 aa6.5□□□□□ -1.37
MSS116YDR194C EXG2P52911 562 aa6.5□□□□□ -1.37
MSS116YDR194C TIM50Q02776 476 aa6.5□□□□□ -1.37
MSS116YDR194C YVC1Q12324 675 aa6.5□□□□□ -1.37
MSS116YDR194C GPR1Q12361 961 aa6.5□□□□□ -1.37
MSS116YDR194C IME1P21190 360 aa6.49□□□□□ -1.37
MSS116YDR194C CDC60P26637 1090 aaKnown RBP6.49□□□□□ -1.37
MSS116YDR194C VPH1P32563 840 aaKnown RBP6.49□□□□□ -1.37
MSS116YDR194C NPR3P38742 1146 aa6.49□□□□□ -1.37
MSS116YDR194C RRM3P38766 723 aa6.49□□□□□ -1.37
MSS116YDR194C UME6P39001 836 aa6.49□□□□□ -1.37
MSS116YDR194C LYS14P40971 790 aa6.49□□□□□ -1.37
MSS116YDR194C SSY5P47002 699 aa6.49□□□□□ -1.37
MSS116YDR194C MFB1Q04922 465 aa6.49□□□□□ -1.37
MSS116YDR194C ASM4Q05166 528 aa6.49□□□□□ -1.37
MSS116YDR194C YCG1Q06680 1035 aa6.49□□□□□ -1.37
MSS116YDR194C PGA3Q12746 312 aaKnown RBP6.49□□□□□ -1.37
MSS116YDR194C FRD1P32614 470 aaKnown RBP6.49□□□□□ -1.37
MSS116YDR194C APN2P38207 520 aa6.49□□□□□ -1.37
MSS116YDR194C NPR2P39923 615 aa6.49□□□□□ -1.37
MSS116YDR194C YML6P51998 286 aa6.49□□□□□ -1.37
MSS116YDR194C YGR016WP53209 190 aa6.49□□□□□ -1.37
MSS116YDR194C YGR250CP53316 781 aaKnown RBP6.49□□□□□ -1.37
MSS116YDR194C TRI1Q05024 226 aa6.49□□□□□ -1.37
MSS116YDR194C CDA1Q06702 301 aa6.49□□□□□ -1.37
MSS116YDR194C OLE1P21147 510 aaKnown RBP6.48□□□□□ -1.37
MSS116YDR194C RPC53P25441 422 aa6.48□□□□□ -1.37
MSS116YDR194C ESL2P36168 1195 aa6.48□□□□□ -1.37
MSS116YDR194C AXL1P40851 1208 aa6.48□□□□□ -1.37
MSS116YDR194C RCR2Q03446 210 aaKnown RBP6.48□□□□□ -1.37
MSS116YDR194C ADE3P07245 946 aaKnown RBP6.48□□□□□ -1.37
MSS116YDR194C LRG1P35688 1017 aa6.48□□□□□ -1.37
MSS116YDR194C ABZ1P37254 787 aaPredicted RBP6.48□□□□□ -1.37
MSS116YDR194C LRP1P38801 184 aaKnown RBP6.48□□□□□ -1.37
MSS116YDR194C HSF1P10961 833 aa6.47□□□□□ -1.37
MSS116YDR194C NAT1P12945 854 aaKnown RBP6.47□□□□□ -1.37
MSS116YDR194C RIT1P23796 513 aa6.47□□□□□ -1.37
MSS116YDR194C SGF29P25554 259 aa6.47□□□□□ -1.37
MSS116YDR194C ANP1P32629 500 aa6.47□□□□□ -1.37
MSS116YDR194C GID8P40208 455 aa6.47□□□□□ -1.37
MSS116YDR194C MPP10P47083 593 aaKnown RBP6.47□□□□□ -1.37
MSS116YDR194C PSP1P50896 841 aaKnown RBP6.47□□□□□ -1.37
MSS116YDR194C YPL071CQ02864 156 aa6.47□□□□□ -1.37
MSS116YDR194C AAD4Q07747 329 aa6.47□□□□□ -1.37
MSS116YDR194C ISA1Q07821 250 aaPredicted RBP6.47□□□□□ -1.37
MSS116YDR194C PHM7Q12252 991 aa6.47□□□□□ -1.37
MSS116YDR194C RIB2Q12362 591 aaKnown RBP6.47□□□□□ -1.37
MSS116YDR194C MTH1P35198 433 aa6.46□□□□□ -1.37
MSS116YDR194C TEF4P36008 412 aaKnown RBP6.46□□□□□ -1.37
MSS116YDR194C BYE1P36106 594 aa6.46□□□□□ -1.37
MSS116YDR194C LSM5P40089 93 aaKnown RBP6.46□□□□□ -1.37
MSS116YDR194C PRM2P40534 656 aa6.46□□□□□ -1.37
MSS116YDR194C YIR007WP40566 764 aa6.46□□□□□ -1.37
MSS116YDR194C ORC4P54791 529 aa6.46□□□□□ -1.37
MSS116YDR194C SMC6Q12749 1114 aa6.46□□□□□ -1.37
MSS116YDR194C RED1P14291 827 aa6.46□□□□□ -1.38
MSS116YDR194C CKA1P15790 372 aa6.46□□□□□ -1.38
MSS116YDR194C PFK2P16862 959 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
MSS116YDR194C TPM1P17536 199 aaKnown RBP6.46□□□□□ -1.38
MSS116YDR194C MRPL36P36531 177 aa6.46□□□□□ -1.38
MSS116YDR194C RFC5P38251 354 aa6.46□□□□□ -1.38
MSS116YDR194C SRP72P38688 640 aaKnown RBP6.46□□□□□ -1.38
MSS116YDR194C CAJ1P39101 391 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 100.2 ms