RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDS1	YDR113C	BIT2	P38346	545 aa		4.57	□□□□□ -1.68
PDS1	YDR113C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
PDS1	YDR113C	YIL166C	P40445	542 aa		4.57	□□□□□ -1.68
PDS1	YDR113C	ATG4	P53867	494 aa		4.57	□□□□□ -1.68
PDS1	YDR113C	YKU70	P32807	602 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	SET3	P36124	751 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	TYS1	P36421	394 aa	Known RBP	4.56	□□□□□ -1.68
PDS1	YDR113C	PMC1	P38929	1173 aa	Predicted RBP	4.56	□□□□□ -1.68
PDS1	YDR113C	YJL206C	P39529	758 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	UBP12	P39538	1254 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	RET2	P43621	546 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	HLJ1	P48353	224 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	YNR029C	P53729	429 aa	Known RBP	4.56	□□□□□ -1.68
PDS1	YDR113C	MTQ2	Q03920	221 aa	Predicted RBP	4.56	□□□□□ -1.68
PDS1	YDR113C	YLR407W	Q06070	228 aa		4.56	□□□□□ -1.68
PDS1	YDR113C	SWI6	P09959	803 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	MDM10	P18409	493 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	FEN2	P25621	512 aa	Known RBP	4.55	□□□□□ -1.68
PDS1	YDR113C	FLO10	P36170	1169 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	ARG2	P40360	574 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	CCT5	P40413	562 aa	Known RBP	4.55	□□□□□ -1.68
PDS1	YDR113C	BIT61	P47041	543 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	GPG1	P53130	126 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	RCR2	Q03446	210 aa	Known RBP	4.55	□□□□□ -1.68
PDS1	YDR113C	ARO10	Q06408	635 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	VHS3	Q08438	674 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	DIA2	Q08496	732 aa	Predicted RBP	4.55	□□□□□ -1.68
PDS1	YDR113C	AFT2	Q08957	416 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	USV1	Q12132	391 aa		4.55	□□□□□ -1.68
PDS1	YDR113C	CLF1	Q12309	687 aa	Predicted RBP	4.55	□□□□□ -1.68
PDS1	YDR113C	FRS1	P15624	595 aa	Known RBP	4.54	□□□□□ -1.68
PDS1	YDR113C	IME1	P21190	360 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	PRP28	P23394	588 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	PRP19	P32523	503 aa	Known RBP	4.54	□□□□□ -1.68
PDS1	YDR113C	MSS1	P32559	526 aa	Predicted RBP	4.54	□□□□□ -1.68
PDS1	YDR113C	PET127	P32606	800 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	EMP70	P32802	667 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	TDA3	P38758	523 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	HXT6	P39003	570 aa	Known RBP	4.54	□□□□□ -1.68
PDS1	YDR113C	HXT7	P39004	570 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	CTR1	P49573	406 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	YPS7	Q06325	596 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	CHS5	Q12114	671 aa	Known RBP	4.54	□□□□□ -1.68
PDS1	YDR113C	POM34	Q12445	299 aa		4.54	□□□□□ -1.68
PDS1	YDR113C	RPS21B	Q3E754	87 aa	Known RBP	4.54	□□□□□ -1.68
PDS1	YDR113C	DMC1	P25453	334 aa		4.53	□□□□□ -1.68
PDS1	YDR113C	GLG1	P36143	616 aa		4.53	□□□□□ -1.68
PDS1	YDR113C	YEN1	P40028	759 aa		4.53	□□□□□ -1.68
PDS1	YDR113C	PIG2	P40187	538 aa		4.53	□□□□□ -1.68
PDS1	YDR113C	RFX1	P48743	811 aa		4.53	□□□□□ -1.68
PDS1	YDR113C	ECM9	Q02202	377 aa		4.53	□□□□□ -1.68
PDS1	YDR113C	ERG20	P08524	352 aa	Known RBP	4.52	□□□□□ -1.69
PDS1	YDR113C	ADY2	P25613	283 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	YKR075C	P36155	307 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	GRX7	P38068	203 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	BDH2	P39713	417 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	YIL077C	P40508	320 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	GPP1	P41277	250 aa	Known RBP	4.52	□□□□□ -1.69
PDS1	YDR113C	PMT3	P47190	753 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	UME1	Q03010	460 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	YMR210W	Q03649	449 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	ICT1	Q12385	394 aa		4.52	□□□□□ -1.69
PDS1	YDR113C	FUB1	P25659	250 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	ENP1	P38333	483 aa	Known RBP	4.51	□□□□□ -1.69
PDS1	YDR113C	YHR097C	P38809	366 aa	Known RBP	4.51	□□□□□ -1.69
PDS1	YDR113C	KHA1	P40309	873 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	BUD8	P41698	603 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	GZF3	P42944	551 aa	Known RBP	4.51	□□□□□ -1.69
PDS1	YDR113C	MPS3	P47069	682 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	YGR151C	P53287	111 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	YFT2	Q06676	274 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	STP4	Q07351	490 aa		4.51	□□□□□ -1.69
PDS1	YDR113C	COS111	P38308	924 aa		4.5	□□□□□ -1.69
PDS1	YDR113C	OAF1	P39720	1047 aa	Predicted RBP	4.5	□□□□□ -1.69
PDS1	YDR113C	YGR153W	P48238	217 aa		4.5	□□□□□ -1.69
PDS1	YDR113C	NOP15	P53927	220 aa	Predicted RBP	4.5	□□□□□ -1.69
PDS1	YDR113C	YDL086W	Q07505	273 aa		4.5	□□□□□ -1.69
PDS1	YDR113C	HFI1	Q12060	488 aa		4.5	□□□□□ -1.69
PDS1	YDR113C	RPS17A	P02407	136 aa	Known RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	RPS21A	P0C0V8	87 aa	Known RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	RPS17B	P14127	136 aa	Known RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	KIN82	P25341	720 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	MRC1	P25588	1096 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	OAF3	P36023	863 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	CTP1	P38152	299 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	FAT1	P38225	669 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	MNN11	P46985	422 aa	Known RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	BFA1	P47113	574 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	APM1	Q00776	475 aa	Predicted RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	VBA4	Q04602	768 aa	Known RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	THI7	Q05998	598 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	YTM1	Q12024	460 aa	Predicted RBP	4.49	□□□□□ -1.69
PDS1	YDR113C	APM4	Q99186	491 aa		4.49	□□□□□ -1.69
PDS1	YDR113C	SEC65	P29478	273 aa		4.48	□□□□□ -1.69
PDS1	YDR113C	GMH1	P36125	273 aa		4.48	□□□□□ -1.69
PDS1	YDR113C	PAF1	P38351	445 aa		4.48	□□□□□ -1.69
PDS1	YDR113C	KSP1	P38691	1029 aa	Known RBP	4.48	□□□□□ -1.69
PDS1	YDR113C	IES1	P43579	692 aa		4.48	□□□□□ -1.69
PDS1	YDR113C	YEL020C	P39994	560 aa		4.47	□□□□□ -1.69
PDS1	YDR113C	MIT1	P40002	666 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms