RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W NGL1Q08213 363 aaKnown RBP4.56□□□□□ -1.68
UBC9YDL064W PPR1P07272 904 aaPredicted RBP4.55□□□□□ -1.68
UBC9YDL064W SFB3P38810 929 aa4.55□□□□□ -1.68
UBC9YDL064W CCT3P39077 534 aaKnown RBP4.55□□□□□ -1.68
UBC9YDL064W AIM21P40563 679 aa4.55□□□□□ -1.68
UBC9YDL064W RNR4P49723 345 aaKnown RBP4.55□□□□□ -1.68
UBC9YDL064W PAN2P53010 1115 aaPredicted RBP4.55□□□□□ -1.68
UBC9YDL064W THI22Q06490 572 aa4.55□□□□□ -1.68
UBC9YDL064W TUB2P02557 457 aaKnown RBP4.54□□□□□ -1.68
UBC9YDL064W DGR2P32330 852 aa4.54□□□□□ -1.68
UBC9YDL064W BCS1P32839 456 aa4.54□□□□□ -1.68
UBC9YDL064W EAF5P39995 279 aa4.54□□□□□ -1.68
UBC9YDL064W MSE1P48525 536 aa4.54□□□□□ -1.68
UBC9YDL064W SLD3P53135 668 aa4.54□□□□□ -1.68
UBC9YDL064W MUK1Q02866 612 aa4.54□□□□□ -1.68
UBC9YDL064W VBA4Q04602 768 aaKnown RBP4.54□□□□□ -1.68
UBC9YDL064W YOL057WQ08225 711 aa4.54□□□□□ -1.68
UBC9YDL064W PUS9Q12069 462 aa4.54□□□□□ -1.68
UBC9YDL064W MLH3Q12083 715 aa4.54□□□□□ -1.68
UBC9YDL064W POM34Q12445 299 aa4.54□□□□□ -1.68
UBC9YDL064W ERG20P08524 352 aaKnown RBP4.53□□□□□ -1.68
UBC9YDL064W FEN2P25621 512 aaKnown RBP4.53□□□□□ -1.68
UBC9YDL064W MF(ALPHA)2P32435 120 aa4.53□□□□□ -1.68
UBC9YDL064W SEC6P32844 805 aa4.53□□□□□ -1.68
UBC9YDL064W YIL077CP40508 320 aa4.53□□□□□ -1.68
UBC9YDL064W PXA1P41909 870 aa4.53□□□□□ -1.68
UBC9YDL064W SLI1P53304 468 aa4.53□□□□□ -1.68
UBC9YDL064W PHM6Q05637 104 aa4.53□□□□□ -1.68
UBC9YDL064W DIA2Q08496 732 aaPredicted RBP4.53□□□□□ -1.68
UBC9YDL064W CWC2Q12046 339 aaPredicted RBP4.53□□□□□ -1.68
UBC9YDL064W ZRT2Q12436 422 aa4.53□□□□□ -1.68
UBC9YDL064W TMA7Q3E764 64 aaKnown RBP4.53□□□□□ -1.68
UBC9YDL064W SIR3P06701 978 aa4.52□□□□□ -1.69
UBC9YDL064W KAR1P11927 433 aa4.52□□□□□ -1.69
UBC9YDL064W MTC7P32633 139 aa4.52□□□□□ -1.69
UBC9YDL064W PHO11P35842 467 aa4.52□□□□□ -1.69
UBC9YDL064W CDS1P38221 457 aa4.52□□□□□ -1.69
UBC9YDL064W YHR033WP38690 423 aa4.52□□□□□ -1.69
UBC9YDL064W PHO12P38693 467 aa4.52□□□□□ -1.69
UBC9YDL064W CHS7P38843 316 aa4.52□□□□□ -1.69
UBC9YDL064W FMP52P40008 231 aa4.52□□□□□ -1.69
UBC9YDL064W ATG36P46983 293 aa4.52□□□□□ -1.69
UBC9YDL064W RFX1P48743 811 aa4.52□□□□□ -1.69
UBC9YDL064W TAF4P50105 388 aa4.52□□□□□ -1.69
UBC9YDL064W RPS9BP05755 195 aaKnown RBP4.51□□□□□ -1.69
UBC9YDL064W PRE4P30657 266 aa4.51□□□□□ -1.69
UBC9YDL064W COS111P38308 924 aa4.51□□□□□ -1.69
UBC9YDL064W REV7P38927 245 aa4.51□□□□□ -1.69
UBC9YDL064W IRC5P43610 853 aa4.51□□□□□ -1.69
UBC9YDL064W YFT2Q06676 274 aa4.51□□□□□ -1.69
UBC9YDL064W PEX15Q08215 383 aa4.51□□□□□ -1.69
UBC9YDL064W YOR378WQ08902 515 aa4.51□□□□□ -1.69
UBC9YDL064W SLX4Q12098 748 aa4.51□□□□□ -1.69
UBC9YDL064W YKL033W-AQ86ZR7 236 aa4.51□□□□□ -1.69
UBC9YDL064W YEL076C-AP0CX16 216 aa4.5□□□□□ -1.69
UBC9YDL064W YLR464WP0CX17 216 aa4.5□□□□□ -1.69
UBC9YDL064W TUP1P16649 713 aa4.5□□□□□ -1.69
UBC9YDL064W ACO1P19414 778 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
UBC9YDL064W KIN82P25341 720 aa4.5□□□□□ -1.69
UBC9YDL064W RMA1P36001 430 aaKnown RBP4.5□□□□□ -1.69
UBC9YDL064W PCL5P38794 229 aa4.5□□□□□ -1.69
UBC9YDL064W YEL076CP39971 216 aa4.5□□□□□ -1.69
UBC9YDL064W PEA2P40091 420 aa4.5□□□□□ -1.69
UBC9YDL064W STB4P50104 949 aa4.5□□□□□ -1.69
UBC9YDL064W FHN1P53279 174 aa4.5□□□□□ -1.69
UBC9YDL064W OMS1Q06668 471 aa4.5□□□□□ -1.69
UBC9YDL064W MSS1P32559 526 aaPredicted RBP4.49□□□□□ -1.69
UBC9YDL064W CRG1P38892 291 aaRIP-Chip data4.49□□□□□ -1.69not detected
UBC9YDL064W EMP65P40085 556 aa4.49□□□□□ -1.69
UBC9YDL064W PIG2P40187 538 aa4.49□□□□□ -1.69
UBC9YDL064W YIL092WP40497 633 aa4.49□□□□□ -1.69
UBC9YDL064W TEL2P53038 688 aa4.49□□□□□ -1.69
UBC9YDL064W CHS5Q12114 671 aaKnown RBP4.49□□□□□ -1.69
UBC9YDL064W SST2P11972 698 aaKnown RBP4.48□□□□□ -1.69
UBC9YDL064W THR1P17423 357 aaKnown RBP4.48□□□□□ -1.69
UBC9YDL064W SEC15P22224 910 aa4.48□□□□□ -1.69
UBC9YDL064W PRP22P24384 1145 aaKnown RBP4.48□□□□□ -1.69
UBC9YDL064W SRP68P38687 599 aaKnown RBP4.48□□□□□ -1.69
UBC9YDL064W YHR097CP38809 366 aaKnown RBP4.48□□□□□ -1.69
UBC9YDL064W TMN3P40071 706 aa4.48□□□□□ -1.69
UBC9YDL064W FTR1P40088 404 aa4.48□□□□□ -1.69
UBC9YDL064W PRM2P40534 656 aa4.48□□□□□ -1.69
UBC9YDL064W DAS1P47005 663 aa4.48□□□□□ -1.69
UBC9YDL064W MPS3P47069 682 aa4.48□□□□□ -1.69
UBC9YDL064W TIM50Q02776 476 aa4.48□□□□□ -1.69
UBC9YDL064W NSE5Q03718 556 aa4.48□□□□□ -1.69
UBC9YDL064W RTK1Q12100 620 aaPredicted RBP4.48□□□□□ -1.69
UBC9YDL064W PRP28P23394 588 aa4.47□□□□□ -1.69
UBC9YDL064W SET3P36124 751 aa4.47□□□□□ -1.69
UBC9YDL064W UBS1P38290 277 aa4.47□□□□□ -1.69
UBC9YDL064W EHT1P38295 451 aa4.47□□□□□ -1.69
UBC9YDL064W YDL183CP48569 320 aa4.47□□□□□ -1.69
UBC9YDL064W SPO1P53541 631 aa4.47□□□□□ -1.69
UBC9YDL064W MTD1Q02046 320 aaKnown RBP4.47□□□□□ -1.69
UBC9YDL064W PPN1Q04119 674 aa4.47□□□□□ -1.69
UBC9YDL064W USV1Q12132 391 aa4.47□□□□□ -1.69
UBC9YDL064W GAL1P04385 528 aa4.46□□□□□ -1.7
UBC9YDL064W KCC4P25389 1037 aa4.46□□□□□ -1.7
UBC9YDL064W NIC96P34077 839 aa4.46□□□□□ -1.7
UBC9YDL064W CBR1P38626 284 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms