RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	CHS5	Q12114	671 aa	Known RBP	5.12	□□□□□ -1.59
APA1	YCL050C	THR1	P17423	357 aa	Known RBP	5.11	□□□□□ -1.59
APA1	YCL050C	PRP22	P24384	1145 aa	Known RBP	5.11	□□□□□ -1.59
APA1	YCL050C	FEN2	P25621	512 aa	Known RBP	5.11	□□□□□ -1.59
APA1	YCL050C	DUN1	P39009	513 aa		5.11	□□□□□ -1.59
APA1	YCL050C	OAF1	P39720	1047 aa	Predicted RBP	5.11	□□□□□ -1.59
APA1	YCL050C	BIT61	P47041	543 aa		5.11	□□□□□ -1.59
APA1	YCL050C	VPS73	P53142	486 aa	Known RBP	5.11	□□□□□ -1.59
APA1	YCL050C	YGL081W	P53156	320 aa		5.11	□□□□□ -1.59
APA1	YCL050C	PTA1	Q01329	785 aa	Predicted RBP	5.11	□□□□□ -1.59
APA1	YCL050C	SWI6	P09959	803 aa		5.1	□□□□□ -1.59
APA1	YCL050C	NTH1	P32356	751 aa		5.1	□□□□□ -1.59
APA1	YCL050C	DID4	P36108	232 aa		5.1	□□□□□ -1.59
APA1	YCL050C	BDH2	P39713	417 aa		5.1	□□□□□ -1.59
APA1	YCL050C	PXA1	P41909	870 aa		5.1	□□□□□ -1.59
APA1	YCL050C	GPG1	P53130	126 aa		5.1	□□□□□ -1.59
APA1	YCL050C	ECM9	Q02202	377 aa		5.1	□□□□□ -1.59
APA1	YCL050C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
APA1	YCL050C	RPS21B	Q3E754	87 aa	Known RBP	5.1	□□□□□ -1.59
APA1	YCL050C	RPS17A	P02407	136 aa	Known RBP	5.09	□□□□□ -1.59
APA1	YCL050C	RPS17B	P14127	136 aa	Known RBP	5.09	□□□□□ -1.59
APA1	YCL050C	COS111	P38308	924 aa		5.09	□□□□□ -1.59
APA1	YCL050C	GPP1	P41277	250 aa	Known RBP	5.09	□□□□□ -1.59
APA1	YCL050C	MNN11	P46985	422 aa	Known RBP	5.09	□□□□□ -1.59
APA1	YCL050C	MPS3	P47069	682 aa		5.09	□□□□□ -1.59
APA1	YCL050C	RFX1	P48743	811 aa		5.09	□□□□□ -1.59
APA1	YCL050C	YGR151C	P53287	111 aa		5.09	□□□□□ -1.59
APA1	YCL050C	NOP15	P53927	220 aa	Predicted RBP	5.09	□□□□□ -1.59
APA1	YCL050C	PPN1	Q04119	674 aa		5.09	□□□□□ -1.59
APA1	YCL050C	YPS7	Q06325	596 aa		5.09	□□□□□ -1.59
APA1	YCL050C	SEC6	P32844	805 aa		5.08	□□□□□ -1.6
APA1	YCL050C	SET3	P36124	751 aa		5.08	□□□□□ -1.6
APA1	YCL050C	HXT6	P39003	570 aa	Known RBP	5.08	□□□□□ -1.6
APA1	YCL050C	HXT7	P39004	570 aa		5.08	□□□□□ -1.6
APA1	YCL050C	CCT7	P42943	550 aa	Known RBP	5.08	□□□□□ -1.6
APA1	YCL050C	RCR2	Q03446	210 aa	Known RBP	5.08	□□□□□ -1.6
APA1	YCL050C	YFT2	Q06676	274 aa		5.08	□□□□□ -1.6
APA1	YCL050C	YDL086W	Q07505	273 aa		5.08	□□□□□ -1.6
APA1	YCL050C	TAF3	Q12297	353 aa		5.08	□□□□□ -1.6
APA1	YCL050C	FUB1	P25659	250 aa		5.07	□□□□□ -1.6
APA1	YCL050C	OAF3	P36023	863 aa		5.07	□□□□□ -1.6
APA1	YCL050C	GMH1	P36125	273 aa		5.07	□□□□□ -1.6
APA1	YCL050C	YIL166C	P40445	542 aa		5.07	□□□□□ -1.6
APA1	YCL050C	TAH11	P47112	604 aa		5.07	□□□□□ -1.6
APA1	YCL050C	GLN4	P13188	809 aa	Known RBP	5.06	□□□□□ -1.6
APA1	YCL050C	KCC4	P25389	1037 aa		5.06	□□□□□ -1.6
APA1	YCL050C	YPT7	P32939	208 aa		5.06	□□□□□ -1.6
APA1	YCL050C	PPZ2	P33329	710 aa		5.06	□□□□□ -1.6
APA1	YCL050C	APL3	P38065	1025 aa		5.06	□□□□□ -1.6
APA1	YCL050C	CTP1	P38152	299 aa		5.06	□□□□□ -1.6
APA1	YCL050C	SPC98	P53540	846 aa		5.06	□□□□□ -1.6
APA1	YCL050C	YSH1	Q06224	779 aa	Predicted RBP	5.06	□□□□□ -1.6
APA1	YCL050C	HFI1	Q12060	488 aa		5.06	□□□□□ -1.6
APA1	YCL050C	IME1	P21190	360 aa		5.05	□□□□□ -1.6
APA1	YCL050C	SPO11	P23179	398 aa		5.05	□□□□□ -1.6
APA1	YCL050C	UBS1	P38290	277 aa		5.05	□□□□□ -1.6
APA1	YCL050C	KSP1	P38691	1029 aa	Known RBP	5.05	□□□□□ -1.6
APA1	YCL050C	YHR097C	P38809	366 aa	Known RBP	5.05	□□□□□ -1.6
APA1	YCL050C	KHA1	P40309	873 aa		5.05	□□□□□ -1.6
APA1	YCL050C	BUD8	P41698	603 aa		5.05	□□□□□ -1.6
APA1	YCL050C	SPO1	P53541	631 aa		5.05	□□□□□ -1.6
APA1	YCL050C	STP4	Q07351	490 aa		5.05	□□□□□ -1.6
APA1	YCL050C	SUT2	Q12286	268 aa		5.05	□□□□□ -1.6
APA1	YCL050C	RPS21A	P0C0V8	87 aa	Known RBP	5.04	□□□□□ -1.6
APA1	YCL050C	UBP12	P39538	1254 aa		5.04	□□□□□ -1.6
APA1	YCL050C	YEN1	P40028	759 aa		5.04	□□□□□ -1.6
APA1	YCL050C	TAF4	P50105	388 aa		5.04	□□□□□ -1.6
APA1	YCL050C	NMA2	P53204	395 aa		5.04	□□□□□ -1.6
APA1	YCL050C	APM4	Q99186	491 aa		5.04	□□□□□ -1.6
APA1	YCL050C	RPN13	O13563	156 aa		5.03	□□□□□ -1.6
APA1	YCL050C	FAT1	P38225	669 aa		5.03	□□□□□ -1.6
APA1	YCL050C	VID28	P40547	921 aa		5.03	□□□□□ -1.6
APA1	YCL050C	IES1	P43579	692 aa		5.03	□□□□□ -1.6
APA1	YCL050C	APM1	Q00776	475 aa	Predicted RBP	5.03	□□□□□ -1.6
APA1	YCL050C	BMS1	Q08965	1183 aa	Known RBP	5.03	□□□□□ -1.6
APA1	YCL050C	ENP2	P48234	707 aa	Known RBP	5.02	□□□□□ -1.61
APA1	YCL050C	RNR4	P49723	345 aa	Known RBP	5.02	□□□□□ -1.61
APA1	YCL050C	DIP5	P53388	608 aa		5.02	□□□□□ -1.61
APA1	YCL050C	NSE5	Q03718	556 aa		5.02	□□□□□ -1.61
APA1	YCL050C	GIS1	Q03833	894 aa		5.02	□□□□□ -1.61
APA1	YCL050C	RMP1	Q12530	201 aa		5.02	□□□□□ -1.61
APA1	YCL050C	LAM4	P38800	1345 aa		5.01	□□□□□ -1.61
APA1	YCL050C	TSR4	P25040	408 aa		5.01	□□□□□ -1.61
APA1	YCL050C	DGR2	P32330	852 aa		5.01	□□□□□ -1.61
APA1	YCL050C	ELF1	P36053	145 aa		5.01	□□□□□ -1.61
APA1	YCL050C	YHR033W	P38690	423 aa		5.01	□□□□□ -1.61
APA1	YCL050C	YEL020C	P39994	560 aa		5.01	□□□□□ -1.61
APA1	YCL050C	YPR027C	Q12079	277 aa		5.01	□□□□□ -1.61
APA1	YCL050C	RKI1	Q12189	258 aa		5.01	□□□□□ -1.61
APA1	YCL050C	ADY2	P25613	283 aa		5	□□□□□ -1.61
APA1	YCL050C	PRE4	P30657	266 aa		5	□□□□□ -1.61
APA1	YCL050C	MSS1	P32559	526 aa	Predicted RBP	5	□□□□□ -1.61
APA1	YCL050C	EMP70	P32802	667 aa		5	□□□□□ -1.61
APA1	YCL050C	CUE2	P36075	443 aa	Known RBP	5	□□□□□ -1.61
APA1	YCL050C	RIX1	P38883	763 aa	Predicted RBP	5	□□□□□ -1.61
APA1	YCL050C	TMN3	P40071	706 aa		5	□□□□□ -1.61
APA1	YCL050C	ATF1	P40353	525 aa		5	□□□□□ -1.61
APA1	YCL050C	PMT6	P42934	759 aa		5	□□□□□ -1.61
APA1	YCL050C	DUG1	P43616	481 aa	Known RBP	5	□□□□□ -1.61
APA1	YCL050C	UFO1	Q04511	668 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms