RNA–Protein interactions for RNA: YBR288C

APM3, Transcript of Mu3-like subunit of the clathrin associated protein complex (AP-3), yeast

Gene APM3, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APM3	YBR288C	MAL31	P38156	614 aa		4.91	□□□□□ -1.62
APM3	YBR288C	MUP3	P38734	546 aa		4.91	□□□□□ -1.62
APM3	YBR288C	BEM4	P39011	633 aa		4.91	□□□□□ -1.62
APM3	YBR288C	FRS1	P15624	595 aa	Known RBP	4.9	□□□□□ -1.62
APM3	YBR288C	SEC15	P22224	910 aa		4.9	□□□□□ -1.62
APM3	YBR288C	YPT7	P32939	208 aa		4.9	□□□□□ -1.62
APM3	YBR288C	CTP1	P38152	299 aa		4.9	□□□□□ -1.62
APM3	YBR288C	COS111	P38308	924 aa		4.9	□□□□□ -1.62
APM3	YBR288C	PAC2	P39937	518 aa		4.9	□□□□□ -1.62
APM3	YBR288C	MGS1	P40151	587 aa		4.9	□□□□□ -1.62
APM3	YBR288C	KHA1	P40309	873 aa		4.9	□□□□□ -1.62
APM3	YBR288C	BIT61	P47041	543 aa		4.9	□□□□□ -1.62
APM3	YBR288C	SDA1	P53313	767 aa	Known RBP	4.9	□□□□□ -1.62
APM3	YBR288C	NOP14	Q99207	810 aa	Known RBP	4.9	□□□□□ -1.62
APM3	YBR288C	RPL8A	P17076	256 aa	Known RBP	4.89	□□□□□ -1.63
APM3	YBR288C	SFP1	P32432	683 aa		4.89	□□□□□ -1.63
APM3	YBR288C	PET127	P32606	800 aa		4.89	□□□□□ -1.63
APM3	YBR288C	YFT2	Q06676	274 aa		4.89	□□□□□ -1.63
APM3	YBR288C	STE12	P13574	688 aa		4.88	□□□□□ -1.63
APM3	YBR288C	KIN82	P25341	720 aa		4.88	□□□□□ -1.63
APM3	YBR288C	MSS1	P32559	526 aa	Predicted RBP	4.88	□□□□□ -1.63
APM3	YBR288C	YKU70	P32807	602 aa		4.88	□□□□□ -1.63
APM3	YBR288C	YMC2	P38087	329 aa		4.88	□□□□□ -1.63
APM3	YBR288C	BFA1	P47113	574 aa		4.88	□□□□□ -1.63
APM3	YBR288C	RCR2	Q03446	210 aa	Known RBP	4.88	□□□□□ -1.63
APM3	YBR288C	YMR210W	Q03649	449 aa		4.88	□□□□□ -1.63
APM3	YBR288C	YLR407W	Q06070	228 aa		4.88	□□□□□ -1.63
APM3	YBR288C	MRI1	Q06489	411 aa	Known RBP	4.88	□□□□□ -1.63
APM3	YBR288C	LAM4	P38800	1345 aa		4.88	□□□□□ -1.63
APM3	YBR288C	RPS9B	P05755	195 aa	Known RBP	4.88	□□□□□ -1.63
APM3	YBR288C	RPA135	P22138	1203 aa	Known RBP	4.88	□□□□□ -1.63
APM3	YBR288C	APL3	P38065	1025 aa		4.88	□□□□□ -1.63
APM3	YBR288C	MIT1	P40002	666 aa		4.88	□□□□□ -1.63
APM3	YBR288C	MRK1	P50873	501 aa		4.88	□□□□□ -1.63
APM3	YBR288C	VBA4	Q04602	768 aa	Known RBP	4.88	□□□□□ -1.63
APM3	YBR288C	YSH1	Q06224	779 aa	Predicted RBP	4.88	□□□□□ -1.63
APM3	YBR288C	BMS1	Q08965	1183 aa	Known RBP	4.88	□□□□□ -1.63
APM3	YBR288C	PHO5	P00635	467 aa		4.87	□□□□□ -1.63
APM3	YBR288C	VPS34	P22543	875 aa		4.87	□□□□□ -1.63
APM3	YBR288C	NTH1	P32356	751 aa		4.87	□□□□□ -1.63
APM3	YBR288C	TDA3	P38758	523 aa		4.87	□□□□□ -1.63
APM3	YBR288C	MNN1	P39106	762 aa		4.87	□□□□□ -1.63
APM3	YBR288C	DIP5	P53388	608 aa		4.87	□□□□□ -1.63
APM3	YBR288C	RKI1	Q12189	258 aa		4.87	□□□□□ -1.63
APM3	YBR288C	PMC1	P38929	1173 aa	Predicted RBP	4.86	□□□□□ -1.63
APM3	YBR288C	RET2	P43621	546 aa		4.86	□□□□□ -1.63
APM3	YBR288C	DNM1	P54861	757 aa		4.86	□□□□□ -1.63
APM3	YBR288C	YPS7	Q06325	596 aa		4.86	□□□□□ -1.63
APM3	YBR288C	HOM2	P13663	365 aa	Known RBP	4.85	□□□□□ -1.63
APM3	YBR288C	ORC2	P32833	620 aa		4.85	□□□□□ -1.63
APM3	YBR288C	PMT6	P42934	759 aa		4.85	□□□□□ -1.63
APM3	YBR288C	YJR096W	P47137	282 aa		4.85	□□□□□ -1.63
APM3	YBR288C	HOF1	Q05080	669 aa		4.85	□□□□□ -1.63
APM3	YBR288C	ADR1	P07248	1323 aa		4.84	□□□□□ -1.63
APM3	YBR288C	IME1	P21190	360 aa		4.84	□□□□□ -1.63
APM3	YBR288C	SAT4	P25333	603 aa	Known RBP	4.84	□□□□□ -1.63
APM3	YBR288C	CKB2	P38930	258 aa		4.84	□□□□□ -1.63
APM3	YBR288C	ASN1	P49089	572 aa	Known RBP	4.84	□□□□□ -1.63
APM3	YBR288C	SLK19	Q08581	821 aa	Known RBP	4.84	□□□□□ -1.63
APM3	YBR288C	OSW1	Q08692	278 aa		4.84	□□□□□ -1.63
APM3	YBR288C	MDM20	Q12387	796 aa	Known RBP	4.84	□□□□□ -1.63
APM3	YBR288C	ELF1	P36053	145 aa		4.83	□□□□□ -1.64
APM3	YBR288C	SNM1	P40993	198 aa		4.83	□□□□□ -1.64
APM3	YBR288C	SNF12	P53628	566 aa		4.83	□□□□□ -1.64
APM3	YBR288C	FMP30	Q02883	468 aa		4.83	□□□□□ -1.64
APM3	YBR288C	IZH3	Q07959	543 aa		4.83	□□□□□ -1.64
APM3	YBR288C	SWI6	P09959	803 aa		4.82	□□□□□ -1.64
APM3	YBR288C	PRP22	P24384	1145 aa	Known RBP	4.82	□□□□□ -1.64
APM3	YBR288C	YMC1	P32331	307 aa		4.82	□□□□□ -1.64
APM3	YBR288C	PRP19	P32523	503 aa	Known RBP	4.82	□□□□□ -1.64
APM3	YBR288C	BUD8	P41698	603 aa		4.82	□□□□□ -1.64
APM3	YBR288C	PXA1	P41909	870 aa		4.82	□□□□□ -1.64
APM3	YBR288C	HLJ1	P48353	224 aa		4.82	□□□□□ -1.64
APM3	YBR288C	YDR179W-A	Q03983	463 aa		4.82	□□□□□ -1.64
APM3	YBR288C	UFO1	Q04511	668 aa		4.82	□□□□□ -1.64
APM3	YBR288C	AFT2	Q08957	416 aa		4.82	□□□□□ -1.64
APM3	YBR288C	ADE5,7	P07244	802 aa	Known RBP	4.81	□□□□□ -1.64
APM3	YBR288C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
APM3	YBR288C	UGP1	P32861	499 aa	Known RBP	4.81	□□□□□ -1.64
APM3	YBR288C	STP4	Q07351	490 aa		4.81	□□□□□ -1.64
APM3	YBR288C	RPS21B	Q3E754	87 aa	Known RBP	4.81	□□□□□ -1.64
APM3	YBR288C	TYS1	P36421	394 aa	Known RBP	4.81	□□□□□ -1.64
APM3	YBR288C	YGR153W	P48238	217 aa		4.81	□□□□□ -1.64
APM3	YBR288C	NGL2	Q03264	515 aa	Known RBP	4.81	□□□□□ -1.64
APM3	YBR288C	THI73	Q07904	523 aa		4.81	□□□□□ -1.64
APM3	YBR288C	RPS17A	P02407	136 aa	Known RBP	4.8	□□□□□ -1.64
APM3	YBR288C	TPK2	P06245	380 aa		4.8	□□□□□ -1.64
APM3	YBR288C	RPS17B	P14127	136 aa	Known RBP	4.8	□□□□□ -1.64
APM3	YBR288C	TMN3	P40071	706 aa		4.8	□□□□□ -1.64
APM3	YBR288C	NOP15	P53927	220 aa	Predicted RBP	4.8	□□□□□ -1.64
APM3	YBR288C	ERG11	P10614	530 aa		4.79	□□□□□ -1.64
APM3	YBR288C	SEC65	P29478	273 aa		4.79	□□□□□ -1.64
APM3	YBR288C	RIM13	Q03792	727 aa		4.79	□□□□□ -1.64
APM3	YBR288C	ULA1	Q12059	462 aa		4.79	□□□□□ -1.64
APM3	YBR288C	STE4	P18851	423 aa		4.78	□□□□□ -1.64
APM3	YBR288C	NMD2	P38798	1089 aa	Known RBP	4.78	□□□□□ -1.64
APM3	YBR288C	DUN1	P39009	513 aa		4.78	□□□□□ -1.64
APM3	YBR288C	CCT5	P40413	562 aa	Known RBP	4.78	□□□□□ -1.64
APM3	YBR288C	SPO1	P53541	631 aa		4.78	□□□□□ -1.64
APM3	YBR288C	ECM9	Q02202	377 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms