RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W MMS4P38257 691 aa6.09□□□□□ -1.43
SHM1YBR263W YHL026CP38740 315 aa6.09□□□□□ -1.43
SHM1YBR263W NPP2P39997 493 aa6.09□□□□□ -1.43
SHM1YBR263W LAM5P43560 674 aa6.09□□□□□ -1.43
SHM1YBR263W SPO74P45819 413 aa6.09□□□□□ -1.43
SHM1YBR263W YNL134CP53912 376 aaKnown RBP6.09□□□□□ -1.43
SHM1YBR263W MAG2Q06436 670 aaKnown RBP6.09□□□□□ -1.43
SHM1YBR263W SHS1Q07657 551 aa6.09□□□□□ -1.43
SHM1YBR263W BRE4Q07660 1125 aa6.09□□□□□ -1.43
SHM1YBR263W SPO75Q07798 868 aa6.09□□□□□ -1.43
SHM1YBR263W NOB1Q08444 459 aaKnown RBP6.09□□□□□ -1.43
SHM1YBR263W RPL4AP10664 362 aaKnown RBP6.09□□□□□ -1.44
SHM1YBR263W FUS1P11710 512 aa6.09□□□□□ -1.44
SHM1YBR263W BUD2P33314 1104 aa6.09□□□□□ -1.44
SHM1YBR263W PIN4P34217 668 aaKnown RBP RIP-Chip data6.09□□□□□ -1.44not detected
SHM1YBR263W MIP6P38760 659 aaKnown RBP6.09□□□□□ -1.44
SHM1YBR263W CTM1P38818 585 aa6.09□□□□□ -1.44
SHM1YBR263W TFG2P41896 400 aaPredicted RBP6.09□□□□□ -1.44
SHM1YBR263W SCD6P45978 349 aaKnown RBP RIP-Chip data6.09□□□□□ -1.44 RIP-Chip
SHM1YBR263W RPL4BP49626 362 aaKnown RBP6.09□□□□□ -1.44
SHM1YBR263W CWC2Q12046 339 aaPredicted RBP6.09□□□□□ -1.44
SHM1YBR263W RIF1P29539 1916 aa6.08□□□□□ -1.44
SHM1YBR263W APL1P27351 700 aa6.08□□□□□ -1.44
SHM1YBR263W PRR1P28708 518 aa6.08□□□□□ -1.44
SHM1YBR263W SLX1P38324 304 aa6.08□□□□□ -1.44
SHM1YBR263W EFM2P38347 419 aa6.08□□□□□ -1.44
SHM1YBR263W SPT8P38915 602 aa6.08□□□□□ -1.44
SHM1YBR263W YER186CP40101 306 aa6.08□□□□□ -1.44
SHM1YBR263W GIR2Q03768 265 aaPredicted RBP6.08□□□□□ -1.44
SHM1YBR263W PNP1Q05788 311 aa6.08□□□□□ -1.44
SHM1YBR263W SLX4Q12098 748 aa6.08□□□□□ -1.44
SHM1YBR263W YOR022CQ12204 715 aa6.08□□□□□ -1.44
SHM1YBR263W CYC7P00045 113 aa6.07□□□□□ -1.44
SHM1YBR263W CLC1P17891 233 aa6.07□□□□□ -1.44
SHM1YBR263W IME1P21190 360 aa6.07□□□□□ -1.44
SHM1YBR263W SPO11P23179 398 aa6.07□□□□□ -1.44
SHM1YBR263W MSH3P25336 1018 aa6.07□□□□□ -1.44
SHM1YBR263W SEC65P29478 273 aa6.07□□□□□ -1.44
SHM1YBR263W MPE1P35728 441 aaKnown RBP6.07□□□□□ -1.44
SHM1YBR263W MAE1P36013 669 aaKnown RBP6.07□□□□□ -1.44
SHM1YBR263W YKL023WP36103 277 aaKnown RBP6.07□□□□□ -1.44
SHM1YBR263W SAP190P36123 1033 aa6.07□□□□□ -1.44
SHM1YBR263W PXL1P36166 706 aa6.07□□□□□ -1.44
SHM1YBR263W JHD1P40034 492 aa6.07□□□□□ -1.44
SHM1YBR263W NTA1P40354 457 aa6.07□□□□□ -1.44
SHM1YBR263W OPT1P40897 799 aa6.07□□□□□ -1.44
SHM1YBR263W HFM1P51979 1187 aa6.07□□□□□ -1.44
SHM1YBR263W SUT1P53032 299 aaKnown RBP6.07□□□□□ -1.44
SHM1YBR263W NCE103P53615 221 aa6.07□□□□□ -1.44
SHM1YBR263W ALG11P53954 548 aaKnown RBP6.07□□□□□ -1.44
SHM1YBR263W ASP3-2P0CX77 362 aa6.06□□□□□ -1.44
SHM1YBR263W ASP3-3P0CX78 362 aa6.06□□□□□ -1.44
SHM1YBR263W ASP3-4P0CX79 362 aa6.06□□□□□ -1.44
SHM1YBR263W ASP3-1P0CZ17 362 aa6.06□□□□□ -1.44
SHM1YBR263W SSB1P11484 613 aaKnown RBP6.06□□□□□ -1.44
SHM1YBR263W RSA4P25382 515 aaKnown RBP6.06□□□□□ -1.44
SHM1YBR263W CSE2P33308 149 aa6.06□□□□□ -1.44
SHM1YBR263W TRM2P33753 639 aa6.06□□□□□ -1.44
SHM1YBR263W FTR1P40088 404 aa6.06□□□□□ -1.44
SHM1YBR263W SSB2P40150 613 aaKnown RBP6.06□□□□□ -1.44
SHM1YBR263W ESL1P40456 1118 aa6.06□□□□□ -1.44
SHM1YBR263W DAS1P47005 663 aa6.06□□□□□ -1.44
SHM1YBR263W ALT2P52892 507 aa6.06□□□□□ -1.44
SHM1YBR263W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44 RIP-Chip
SHM1YBR263W SKY1Q03656 742 aa6.06□□□□□ -1.44
SHM1YBR263W YLR297WQ05899 129 aa6.06□□□□□ -1.44
SHM1YBR263W YLR455WQ06188 304 aa6.06□□□□□ -1.44
SHM1YBR263W CSR1Q06705 408 aaKnown RBP6.06□□□□□ -1.44
SHM1YBR263W SGT2Q12118 346 aaKnown RBP6.06□□□□□ -1.44
SHM1YBR263W OSH2Q12451 1283 aa6.06□□□□□ -1.44
SHM1YBR263W NAT1P12945 854 aaKnown RBP6.05□□□□□ -1.44
SHM1YBR263W MSD1P15179 658 aaKnown RBP6.05□□□□□ -1.44
SHM1YBR263W CDC42P19073 191 aa6.05□□□□□ -1.44
SHM1YBR263W PHO13P19881 312 aa6.05□□□□□ -1.44
SHM1YBR263W SWI3P32591 825 aa6.05□□□□□ -1.44
SHM1YBR263W RRN6P32786 894 aa6.05□□□□□ -1.44
SHM1YBR263W RSC8P43609 557 aaKnown RBP6.05□□□□□ -1.44
SHM1YBR263W FYV8P46949 817 aaKnown RBP6.05□□□□□ -1.44
SHM1YBR263W COS5P47187 383 aa6.05□□□□□ -1.44
SHM1YBR263W STB4P50104 949 aa6.05□□□□□ -1.44
SHM1YBR263W EEB1Q02891 456 aa6.05□□□□□ -1.44
SHM1YBR263W EAR1Q03212 550 aa6.05□□□□□ -1.44
SHM1YBR263W SNU56Q03782 492 aaKnown RBP6.05□□□□□ -1.44
SHM1YBR263W SPO71Q03868 1245 aa6.05□□□□□ -1.44
SHM1YBR263W EMI2Q04409 500 aaKnown RBP6.05□□□□□ -1.44
SHM1YBR263W IWR1Q07532 353 aaPredicted RBP6.05□□□□□ -1.44
SHM1YBR263W GIS3Q12418 502 aa6.05□□□□□ -1.44
SHM1YBR263W AHC1Q12433 566 aa6.05□□□□□ -1.44
SHM1YBR263W CYS3P31373 394 aaKnown RBP6.04□□□□□ -1.44
SHM1YBR263W CDC11P32458 415 aa6.04□□□□□ -1.44
SHM1YBR263W MIC60P36112 540 aa6.04□□□□□ -1.44
SHM1YBR263W HEL1P36113 551 aa6.04□□□□□ -1.44
SHM1YBR263W RTT107P38850 1070 aa6.04□□□□□ -1.44
SHM1YBR263W VFA1P40080 203 aa6.04□□□□□ -1.44
SHM1YBR263W YNR065CP53751 1116 aa6.04□□□□□ -1.44
SHM1YBR263W VPS75P53853 264 aa6.04□□□□□ -1.44
SHM1YBR263W RPA49Q01080 415 aaPredicted RBP6.04□□□□□ -1.44
SHM1YBR263W CWC21Q03375 135 aaKnown RBP6.04□□□□□ -1.44
SHM1YBR263W CDD1Q06549 142 aa6.04□□□□□ -1.44
SHM1YBR263W DNL4Q08387 944 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms