RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHC1	YBR235W	ERP2	P39704	215 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	YJR061W	P40355	935 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	DIE2	P50076	525 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	TAF6	P53040	516 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	MAK10	Q02197	733 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	ABZ2	Q03266	374 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	URH1	Q04179	340 aa		4.8	□□□□□ -1.64
VHC1	YBR235W	POM152	P39685	1337 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	PDR12	Q02785	1511 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	CBP6	P07253	162 aa	Predicted RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	MRPL33	P20084	86 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	MSB1	P21339	1137 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	PEP3	P27801	918 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	URA1	P28272	314 aa	Predicted RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	SSO1	P32867	290 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	TIF5	P38431	405 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	EFM4	P40516	257 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	TDA10	P42938	290 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	YJR054W	P47114	497 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	UBX4	P54730	416 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	MDM1	Q01846	1127 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	RSC4	Q02206	625 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	GPI17	Q04080	534 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	CHC1	P22137	1653 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	URA4	P20051	364 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	MRPL32	P25348	183 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	SAC6	P32599	642 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	ANP1	P32629	500 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	PEX6	P33760	1030 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	SET3	P36124	751 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	CTM1	P38818	585 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	YCK3	P39962	524 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	MPS1	P54199	764 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	YDR514C	Q04408	483 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	RAD61	Q99359	647 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	RPO21	P04050	1733 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	RPS3	P05750	240 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	RVS161	P25343	265 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	RPC53	P25441	422 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	SLM4	P38247	162 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	MCX1	P38323	520 aa	Predicted RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
VHC1	YBR235W	HXT6	P39003	570 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	HXT7	P39004	570 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	GSM1	P42950	618 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	QRI1	P43123	477 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	DRN1	P53255	507 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	RBG2	P53295	368 aa	Known RBP	4.79	□□□□□ -1.64
VHC1	YBR235W	GOR1	P53839	350 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	DOP1	Q03921	1698 aa		4.79	□□□□□ -1.64
VHC1	YBR235W	KAR2	P16474	682 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	KIC1	P38692	1080 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	ALD5	P40047	520 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	NUP42	P49686	430 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	NGL3	Q03210	505 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	ACL4	Q03771	387 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	ELG1	Q12050	791 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	TRM11	Q12463	433 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	CMC2	Q3E7A4	109 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	YOS9	Q99220	542 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	VCX1	Q99385	411 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	LAT1	P12695	482 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	SWI4	P25302	1093 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	DBF20	P32328	564 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	RTG2	P32608	588 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	MTW1	P39731	289 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	PAC11	P40960	533 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	BUD6	P41697	788 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	VMA10	P48836	114 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	ZIP2	P53061	704 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	YGR054W	P53235	642 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	YNL040W	P53960	456 aa	Predicted RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	HMO1	Q03973	246 aa	Known RBP	4.78	□□□□□ -1.64
VHC1	YBR235W	SOV1	Q04748	898 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	MLH2	Q07980	695 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	TAF10	Q12030	206 aa		4.78	□□□□□ -1.64
VHC1	YBR235W	SPT10	P35208	640 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	YHL008C	P38750	627 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	MTG2	P38860	518 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	GTT3	P39996	337 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	SHQ1	P40486	507 aa	Predicted RBP	4.78	□□□□□ -1.65
VHC1	YBR235W	CAB2	P40506	365 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	ORC4	P54791	529 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	ISU1	Q03020	165 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	PNP1	Q05788	311 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	SPO21	Q12411	609 aa		4.78	□□□□□ -1.65
VHC1	YBR235W	HBS1	P32769	611 aa	Known RBP	4.77	□□□□□ -1.65
VHC1	YBR235W	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	YET1	P35723	206 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	AAP1	P37898	856 aa	Known RBP	4.77	□□□□□ -1.65
VHC1	YBR235W	RDH54	P38086	958 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	YHR112C	P38716	378 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	TDA3	P38758	523 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	MET13	P53128	600 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	DSE4	P53753	1117 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	ERG5	P54781	538 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	EMP46	Q12396	444 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	YBT1	P32386	1661 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	RPN13	O13563	156 aa		4.77	□□□□□ -1.65
VHC1	YBR235W	RPB2	P08518	1224 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 168.1 ms