RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	ILV6	P25605	309 aa	Known RBP	5.64	□□□□□ -1.51
RTG3	YBL103C	YPT7	P32939	208 aa		5.64	□□□□□ -1.51
RTG3	YBL103C	IMO32	P53219	342 aa		5.64	□□□□□ -1.51
RTG3	YBL103C	YLR407W	Q06070	228 aa		5.64	□□□□□ -1.51
RTG3	YBL103C	RPN13	O13563	156 aa		5.63	□□□□□ -1.51
RTG3	YBL103C	ABF1	P14164	731 aa		5.63	□□□□□ -1.51
RTG3	YBL103C	YKU70	P32807	602 aa		5.63	□□□□□ -1.51
RTG3	YBL103C	BIT61	P47041	543 aa		5.63	□□□□□ -1.51
RTG3	YBL103C	NMA2	P53204	395 aa		5.63	□□□□□ -1.51
RTG3	YBL103C	RCR2	Q03446	210 aa	Known RBP	5.63	□□□□□ -1.51
RTG3	YBL103C	PET127	P32606	800 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	TDA3	P38758	523 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	KHA1	P40309	873 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	BFA1	P47113	574 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	YJR096W	P47137	282 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	SPC98	P53540	846 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	YMR210W	Q03649	449 aa		5.62	□□□□□ -1.51
RTG3	YBL103C	SEC15	P22224	910 aa		5.61	□□□□□ -1.51
RTG3	YBL103C	CTP1	P38152	299 aa		5.61	□□□□□ -1.51
RTG3	YBL103C	COS111	P38308	924 aa		5.61	□□□□□ -1.51
RTG3	YBL103C	CKB2	P38930	258 aa		5.61	□□□□□ -1.51
RTG3	YBL103C	VBA4	Q04602	768 aa	Known RBP	5.61	□□□□□ -1.51
RTG3	YBL103C	YFT2	Q06676	274 aa		5.61	□□□□□ -1.51
RTG3	YBL103C	RPS9B	P05755	195 aa	Known RBP	5.6	□□□□□ -1.51
RTG3	YBL103C	KIN82	P25341	720 aa		5.6	□□□□□ -1.51
RTG3	YBL103C	KCC4	P25389	1037 aa		5.6	□□□□□ -1.51
RTG3	YBL103C	MSS1	P32559	526 aa	Predicted RBP	5.6	□□□□□ -1.51
RTG3	YBL103C	RET2	P43621	546 aa		5.6	□□□□□ -1.51
RTG3	YBL103C	YPS7	Q06325	596 aa		5.6	□□□□□ -1.51
RTG3	YBL103C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
RTG3	YBL103C	PRP19	P32523	503 aa	Known RBP	5.59	□□□□□ -1.51
RTG3	YBL103C	MUP3	P38734	546 aa		5.59	□□□□□ -1.51
RTG3	YBL103C	NMD2	P38798	1089 aa	Known RBP	5.59	□□□□□ -1.51
RTG3	YBL103C	HLJ1	P48353	224 aa		5.59	□□□□□ -1.51
RTG3	YBL103C	LAM4	P38800	1345 aa		5.59	□□□□□ -1.51
RTG3	YBL103C	COQ11	Q05892	277 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	YNL162W-A	Q3E7A8	72 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	STE12	P13574	688 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	IME1	P21190	360 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	TYS1	P36421	394 aa	Known RBP	5.58	□□□□□ -1.52
RTG3	YBL103C	YMC2	P38087	329 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	MIT1	P40002	666 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	DIP5	P53388	608 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	YSH1	Q06224	779 aa	Predicted RBP	5.58	□□□□□ -1.52
RTG3	YBL103C	THI73	Q07904	523 aa		5.58	□□□□□ -1.52
RTG3	YBL103C	RPS21B	Q3E754	87 aa	Known RBP	5.58	□□□□□ -1.52
RTG3	YBL103C	NTH1	P32356	751 aa		5.57	□□□□□ -1.52
RTG3	YBL103C	APL3	P38065	1025 aa		5.57	□□□□□ -1.52
RTG3	YBL103C	PAC2	P39937	518 aa		5.57	□□□□□ -1.52
RTG3	YBL103C	BUD8	P41698	603 aa		5.57	□□□□□ -1.52
RTG3	YBL103C	UTP14	Q04500	899 aa	Known RBP	5.57	□□□□□ -1.52
RTG3	YBL103C	THI7	Q05998	598 aa		5.57	□□□□□ -1.52
RTG3	YBL103C	BMS1	Q08965	1183 aa	Known RBP	5.57	□□□□□ -1.52
RTG3	YBL103C	RKI1	Q12189	258 aa		5.57	□□□□□ -1.52
RTG3	YBL103C	SWI6	P09959	803 aa		5.56	□□□□□ -1.52
RTG3	YBL103C	MDM10	P18409	493 aa		5.56	□□□□□ -1.52
RTG3	YBL103C	ELF1	P36053	145 aa		5.56	□□□□□ -1.52
RTG3	YBL103C	YGR153W	P48238	217 aa		5.56	□□□□□ -1.52
RTG3	YBL103C	PHO5	P00635	467 aa		5.55	□□□□□ -1.52
RTG3	YBL103C	RPA135	P22138	1203 aa	Known RBP	5.55	□□□□□ -1.52
RTG3	YBL103C	PXA1	P41909	870 aa		5.55	□□□□□ -1.52
RTG3	YBL103C	PMT6	P42934	759 aa		5.55	□□□□□ -1.52
RTG3	YBL103C	NOP15	P53927	220 aa	Predicted RBP	5.55	□□□□□ -1.52
RTG3	YBL103C	MTQ2	Q03920	221 aa	Predicted RBP	5.55	□□□□□ -1.52
RTG3	YBL103C	STP4	Q07351	490 aa		5.55	□□□□□ -1.52
RTG3	YBL103C	CCT5	P40413	562 aa	Known RBP	5.54	□□□□□ -1.52
RTG3	YBL103C	MRK1	P50873	501 aa		5.54	□□□□□ -1.52
RTG3	YBL103C	SNF12	P53628	566 aa		5.54	□□□□□ -1.52
RTG3	YBL103C	IZH3	Q07959	543 aa		5.54	□□□□□ -1.52
RTG3	YBL103C	RPS17A	P02407	136 aa	Known RBP	5.53	□□□□□ -1.52
RTG3	YBL103C	RPS17B	P14127	136 aa	Known RBP	5.53	□□□□□ -1.52
RTG3	YBL103C	PRP22	P24384	1145 aa	Known RBP	5.53	□□□□□ -1.52
RTG3	YBL103C	PMC1	P38929	1173 aa	Predicted RBP	5.53	□□□□□ -1.52
RTG3	YBL103C	YJR142W	P47173	342 aa		5.53	□□□□□ -1.52
RTG3	YBL103C	ASN1	P49089	572 aa	Known RBP	5.53	□□□□□ -1.52
RTG3	YBL103C	ECM9	Q02202	377 aa		5.53	□□□□□ -1.52
RTG3	YBL103C	MRI1	Q06489	411 aa	Known RBP	5.53	□□□□□ -1.52
RTG3	YBL103C	SEC65	P29478	273 aa		5.52	□□□□□ -1.53
RTG3	YBL103C	HXT6	P39003	570 aa	Known RBP	5.52	□□□□□ -1.53
RTG3	YBL103C	HXT7	P39004	570 aa		5.52	□□□□□ -1.53
RTG3	YBL103C	UFO1	Q04511	668 aa		5.52	□□□□□ -1.53
RTG3	YBL103C	MDM20	Q12387	796 aa	Known RBP	5.52	□□□□□ -1.53
RTG3	YBL103C	DUN1	P39009	513 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	GLN4	P13188	809 aa	Known RBP	5.51	□□□□□ -1.53
RTG3	YBL103C	VPS34	P22543	875 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	SAT4	P25333	603 aa	Known RBP	5.51	□□□□□ -1.53
RTG3	YBL103C	TMN3	P40071	706 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	GZF3	P42944	551 aa	Known RBP	5.51	□□□□□ -1.53
RTG3	YBL103C	YNR029C	P53729	429 aa	Known RBP	5.51	□□□□□ -1.53
RTG3	YBL103C	UME1	Q03010	460 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	YDR179W-A	Q03983	463 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	YHM2	Q04013	314 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	OSW1	Q08692	278 aa		5.51	□□□□□ -1.53
RTG3	YBL103C	HOM2	P13663	365 aa	Known RBP	5.5	□□□□□ -1.53
RTG3	YBL103C	YMC1	P32331	307 aa		5.5	□□□□□ -1.53
RTG3	YBL103C	SPO1	P53541	631 aa		5.5	□□□□□ -1.53
RTG3	YBL103C	FMP30	Q02883	468 aa		5.5	□□□□□ -1.53
RTG3	YBL103C	NGL2	Q03264	515 aa	Known RBP	5.5	□□□□□ -1.53
RTG3	YBL103C	SLK19	Q08581	821 aa	Known RBP	5.5	□□□□□ -1.53
RTG3	YBL103C	NUP145	P49687	1317 aa		5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms