RNA–Protein interactions for RNA: YBL040C

ERD2, Transcript of HDEL receptor, yeast

Gene ERD2, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERD2	YBL040C	YLR415C	O13578	112 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	HSC82	P15108	705 aa	Known RBP	4.91	□□□□□ -1.62
ERD2	YBL040C	SEG2	P34250	1132 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	RRN3	P36070	627 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	YBR259W	P38338	688 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	MSS4	P38994	779 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	KAP123	P40069	1113 aa	Known RBP	4.91	□□□□□ -1.62
ERD2	YBL040C	URM1	P40554	99 aa	Predicted RBP	4.91	□□□□□ -1.62
ERD2	YBL040C	IMA5	P40884	581 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	PXA1	P41909	870 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	MET12	P46151	657 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	ARG5,6	Q01217	863 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	MRPL13	Q02204	264 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	GIR2	Q03768	265 aa	Predicted RBP	4.91	□□□□□ -1.62
ERD2	YBL040C	PPN1	Q04119	674 aa		4.91	□□□□□ -1.62
ERD2	YBL040C	VBA4	Q04602	768 aa	Known RBP	4.91	□□□□□ -1.62
ERD2	YBL040C	DBP10	Q12389	995 aa	Known RBP	4.91	□□□□□ -1.62
ERD2	YBL040C	ERG20	P08524	352 aa	Known RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	SEC21	P32074	935 aa	Known RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	STE14	P32584	239 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	XRS2	P33301	854 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	APL2	P36000	726 aa	Predicted RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	YNL195C	P40168	261 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	GID8	P40208	455 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	PSF2	P40359	213 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	MNT2	P53059	558 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	MDR1	P53258	950 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	MEP3	P53390	489 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	ARC35	P53731	342 aa	Known RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	RCR2	Q03446	210 aa	Known RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	PLB2	Q03674	706 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	NSE5	Q03718	556 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	SGD1	Q06132	899 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	TSR2	Q06672	205 aa	Known RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	MCM21	Q06675	368 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	HOS1	Q12214	470 aa		4.9	□□□□□ -1.63
ERD2	YBL040C	CLF1	Q12309	687 aa	Predicted RBP	4.9	□□□□□ -1.63
ERD2	YBL040C	HIS5	P07172	385 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	MIS1	P09440	975 aa	Known RBP	4.89	□□□□□ -1.63
ERD2	YBL040C	TUB3	P09734	445 aa	Known RBP	4.89	□□□□□ -1.63
ERD2	YBL040C	POL3	P15436	1097 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	IME1	P21190	360 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	CLB4	P24871	460 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	RPT3	P33298	428 aa	Known RBP	4.89	□□□□□ -1.63
ERD2	YBL040C	SKN7	P38889	622 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	PUG1	P40100	303 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	NDE1	P40215	560 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	MAD2	P40958	196 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	BUD8	P41698	603 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	CPR6	P53691	371 aa	Known RBP	4.89	□□□□□ -1.63
ERD2	YBL040C	SNO2	P53823	222 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	ORC3	P54790	616 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	VPS36	Q06696	566 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	PEX19	Q07418	342 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	ENT1	Q12518	454 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	ATG11	Q12527	1178 aa		4.89	□□□□□ -1.63
ERD2	YBL040C	RPS9B	P05755	195 aa	Known RBP	4.88	□□□□□ -1.63
ERD2	YBL040C	PRP4	P20053	465 aa	Known RBP	4.88	□□□□□ -1.63
ERD2	YBL040C	SEC15	P22224	910 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	MCM3	P24279	971 aa	Known RBP	4.88	□□□□□ -1.63
ERD2	YBL040C	PRP22	P24384	1145 aa	Known RBP	4.88	□□□□□ -1.63
ERD2	YBL040C	YCL049C	P25577	312 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	MRPL36	P36531	177 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	SIC1	P38634	284 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	YHR112C	P38716	378 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	LAM1	P38851	1228 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	STT3	P39007	718 aa	Known RBP	4.88	□□□□□ -1.63
ERD2	YBL040C	CCT3	P39077	534 aa	Known RBP	4.88	□□□□□ -1.63
ERD2	YBL040C	CTH1	P47976	325 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	YNR071C	P53757	342 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	GPB1	Q08886	897 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	DIN7	Q12086	430 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	RTP1	Q12751	981 aa		4.88	□□□□□ -1.63
ERD2	YBL040C	TRP3	P00937	484 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	NCP1	P16603	691 aa	Known RBP	4.87	□□□□□ -1.63
ERD2	YBL040C	RNR1	P21524	888 aa	Known RBP	4.87	□□□□□ -1.63
ERD2	YBL040C	EMC1	P25574	760 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	YLF2	P38746	405 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	RPP1	P38786	293 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	UME6	P39001	836 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	ECM1	P39715	212 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	SAP4	P53036	818 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	NCS6	P53088	359 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	NRG1	Q03125	231 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	GAD1	Q04792	585 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	TRI1	Q05024	226 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	IWR1	Q07532	353 aa	Predicted RBP	4.87	□□□□□ -1.63
ERD2	YBL040C	NPC2	Q12408	173 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	ECM3	Q99252	613 aa		4.87	□□□□□ -1.63
ERD2	YBL040C	MTF2	P10849	440 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	PCK1	P10963	549 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	HMG2	P12684	1045 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
ERD2	YBL040C	KIN82	P25341	720 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	CWH43	P25618	953 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	BIT61	P47041	543 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	PEF1	P53238	335 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	EIS1	Q05050	843 aa	Known RBP	4.86	□□□□□ -1.63
ERD2	YBL040C	RXT3	Q07458	294 aa		4.86	□□□□□ -1.63
ERD2	YBL040C	MED7	Q08278	222 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms