RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	MSS18	P08593	268 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	CTF13	P35203	478 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	MRPS35	P53292	345 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	CNM67	P53865	581 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	RCR2	Q03446	210 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	VMS1	Q04311	632 aa	Known RBP	2.72	□□□□□ -1.97
NCL1	YBL024W	STP4	Q07351	490 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	TAD3	Q9URQ3	322 aa		2.72	□□□□□ -1.97
NCL1	YBL024W	PPR1	P07272	904 aa	Predicted RBP	2.71	□□□□□ -1.98
NCL1	YBL024W	PYC1	P11154	1178 aa	Known RBP	2.71	□□□□□ -1.98
NCL1	YBL024W	CAF20	P12962	161 aa	Known RBP	2.71	□□□□□ -1.98
NCL1	YBL024W	IME1	P21190	360 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	SIC1	P38634	284 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	YHR112C	P38716	378 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	RIM4	P38741	713 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	RPP1	P38786	293 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	YNL195C	P40168	261 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	FKH2	P41813	862 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	IRC5	P43610	853 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	STU2	P46675	888 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	YBP2	P53169	641 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	CEF1	Q03654	590 aa	Predicted RBP	2.71	□□□□□ -1.98
NCL1	YBL024W	MCH5	Q08777	521 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	ACF2	Q12168	779 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	YOL114C	Q12322	202 aa		2.71	□□□□□ -1.98
NCL1	YBL024W	HOP1	P20050	605 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	MF(ALPHA)2	P32435	120 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	SRP68	P38687	599 aa	Known RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	DUN1	P39009	513 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	ELO3	P40319	345 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	YIL092W	P40497	633 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	QRI7	P43122	407 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	YMR206W	Q03695	313 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	VHS3	Q08438	674 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	FRE5	Q08908	694 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	ERG6	P25087	383 aa	Known RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	PET127	P32606	800 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	YPT7	P32939	208 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	APL2	P36000	726 aa	Predicted RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	YBR259W	P38338	688 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	HOL1	P53389	586 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	ERG5	P54781	538 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	MOT3	P54785	490 aa	Known RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	MTD1	Q02046	320 aa	Known RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	SVL3	Q03088	825 aa	Known RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	NRG1	Q03125	231 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	HMO1	Q03973	246 aa	Known RBP	2.7	□□□□□ -1.98
NCL1	YBL024W	VPS36	Q06696	566 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	TGL5	Q12043	749 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	NUR1	Q12066	484 aa		2.7	□□□□□ -1.98
NCL1	YBL024W	YEL076C-A	P0CX16	216 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	YLR464W	P0CX17	216 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	FRS1	P15624	595 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
NCL1	YBL024W	PHO3	P24031	467 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	DBF20	P32328	564 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	DGR2	P32330	852 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	YEL076C	P39971	216 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	RPT2	P40327	437 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	BUD8	P41698	603 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	ASK10	P48361	1146 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	MUP1	P50276	574 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	TAN1	P53072	289 aa	Predicted RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	TEX1	P53851	422 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	REC102	Q02721	264 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	GIS1	Q03833	894 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	MCM21	Q06675	368 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	BRE1	Q07457	700 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	HBT1	Q07653	1046 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	RNR1	P21524	888 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	EXO84	P38261	753 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	ECM1	P39715	212 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	STL1	P39932	569 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	ACA1	P39970	489 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	AMA1	P50082	593 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	COX18	P53239	316 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	HIM1	Q06674	414 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	YDL121C	Q07541	149 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	SGO1	Q08490	590 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	RTK1	Q12100	620 aa	Predicted RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	TRM13	Q12383	476 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	ECM3	Q99252	613 aa		2.69	□□□□□ -1.98
NCL1	YBL024W	HRP1	Q99383	534 aa	Known RBP	2.69	□□□□□ -1.98
NCL1	YBL024W	MRS6	P32864	603 aa	Known RBP	2.68	□□□□□ -1.98
NCL1	YBL024W	GET2	P40056	285 aa		2.68	□□□□□ -1.98
NCL1	YBL024W	SCS2	P40075	244 aa	Known RBP	2.68	□□□□□ -1.98
NCL1	YBL024W	NOP9	P47077	666 aa	Known RBP	2.68	□□□□□ -1.98
NCL1	YBL024W	PUS4	P48567	403 aa	Known RBP	2.68	□□□□□ -1.98
NCL1	YBL024W	STB4	P50104	949 aa		2.68	□□□□□ -1.98
NCL1	YBL024W	VPS72	Q03388	795 aa		2.68	□□□□□ -1.98
NCL1	YBL024W	HLR1	Q04429	423 aa		2.68	□□□□□ -1.98
NCL1	YBL024W	RGC1	Q06108	1083 aa	Known RBP	2.68	□□□□□ -1.98
NCL1	YBL024W	ADH4	P10127	382 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	SEC18	P18759	758 aa	Known RBP	2.67	□□□□□ -1.98
NCL1	YBL024W	DPB3	P27344	201 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	PET309	P32522	965 aa	Predicted RBP	2.67	□□□□□ -1.98
NCL1	YBL024W	MTC7	P32633	139 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	PTH2	P34222	208 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	APT2	P36973	181 aa		2.67	□□□□□ -1.98
NCL1	YBL024W	LYS9	P38999	446 aa		2.67	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms