RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 PLCH1Q4KWH8 1693 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
SMN2-214ENST00000626847 ZBTB24O43167 697 aaPredicted RBP9.97□□□□□ -0.81
SMN2-214ENST00000626847 DHX16O60231 1041 aaKnown RBP9.97□□□□□ -0.81
SMN2-214ENST00000626847 SSFA2P28290 1259 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 EP400NLQ6ZTU2 488 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMN2-214ENST00000626847 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
SMN2-214ENST00000626847 RASSF4Q9H2L5 321 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 MYOM3Q5VTT5 1437 aa9.97□□□□□ -0.81
SMN2-214ENST00000626847 SPATA31A3Q5VYP0 1347 aa9.96□□□□□ -0.81
SMN2-214ENST00000626847 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.81
SMN2-214ENST00000626847 TPD52L2O43399 206 aaKnown RBP9.96□□□□□ -0.82
SMN2-214ENST00000626847 CBX1P83916 185 aa9.96□□□□□ -0.82
SMN2-214ENST00000626847 CACTIN-AS1Q8N1I8 211 aa9.96□□□□□ -0.82
SMN2-214ENST00000626847 GRPEL1Q9HAV7 217 aa9.96□□□□□ -0.82
SMN2-214ENST00000626847 CWC15Q9P013 229 aaKnown RBP9.96□□□□□ -0.82
SMN2-214ENST00000626847 SUFUQ9UMX1 484 aa9.96□□□□□ -0.82
SMN2-214ENST00000626847 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 GSCP56915 257 aaPredicted RBP9.95□□□□□ -0.82
SMN2-214ENST00000626847 CLDN10P78369 228 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 PSME1Q06323 249 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 LARGE2Q8N3Y3 721 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 MYRIPQ8NFW9 859 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 ZCRB1Q8TBF4 217 aaKnown RBP9.95□□□□□ -0.82
SMN2-214ENST00000626847 SYT17Q9BSW7 474 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 UBA5Q9GZZ9 404 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 RANBP17Q9H2T7 1088 aaKnown RBP9.95□□□□□ -0.82
SMN2-214ENST00000626847 CXorf56Q9H5V9 222 aa9.95□□□□□ -0.82
SMN2-214ENST00000626847 GNEQ9Y223 722 aaKnown RBP9.95□□□□□ -0.82
SMN2-214ENST00000626847 MYOM1P52179 1685 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 ABCC5O15440 1437 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 GTF2IP78347 998 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 IRX1P78414 480 aaPredicted RBP9.94□□□□□ -0.82
SMN2-214ENST00000626847 C1QTNF12Q5T7M4 302 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 JAKMIP3Q5VZ66 844 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 FAM196AQ6ZSG2 479 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 KLHL23Q8NBE8 558 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 DEF6Q9H4E7 631 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 CDV3Q9UKY7 258 aaKnown RBP9.94□□□□□ -0.82
SMN2-214ENST00000626847 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
SMN2-214ENST00000626847 ROBO2Q9HCK4 1378 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
SMN2-214ENST00000626847 FAM83GA6ND36 823 aa9.93□□□□□ -0.82
SMN2-214ENST00000626847 C4orf48Q5BLP8 95 aa9.93□□□□□ -0.82
SMN2-214ENST00000626847 CCDC181Q5TID7 509 aa9.93□□□□□ -0.82
SMN2-214ENST00000626847 CLP1Q92989 425 aaKnown RBP9.93□□□□□ -0.82
SMN2-214ENST00000626847 FHDC1Q9C0D6 1143 aaPredicted RBP9.93□□□□□ -0.82
SMN2-214ENST00000626847 POGKQ9P215 609 aa9.93□□□□□ -0.82
SMN2-214ENST00000626847 PCDHB11Q9Y5F2 797 aa9.93□□□□□ -0.82
SMN2-214ENST00000626847 LRPPRCP42704 1394 aaKnown RBP9.93□□□□□ -0.82
SMN2-214ENST00000626847 IBTKQ9P2D0 1353 aaPredicted RBP9.93□□□□□ -0.82
SMN2-214ENST00000626847 THSD7AQ9UPZ6 1657 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 EXOC5O00471 708 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 HSPA6P17066 643 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 PAX7P23759 505 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 MAGEA8P43361 318 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 RAB15P59190 212 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 USP4Q13107 963 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 BIRC2Q13490 618 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 SWI5Q1ZZU3 235 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 LONRF3Q496Y0 759 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 TMX4Q9H1E5 349 aaPredicted RBP9.92□□□□□ -0.82
SMN2-214ENST00000626847 RNF123Q5XPI4 1314 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 CROCC2H7BZ55 1655 aa9.92□□□□□ -0.82
SMN2-214ENST00000626847 PPEF1O14829 653 aaPredicted RBP9.91□□□□□ -0.82
SMN2-214ENST00000626847 HSP90AB1P08238 724 aaKnown RBP9.91□□□□□ -0.82
SMN2-214ENST00000626847 ABCD1P33897 745 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 SH3BP2P78314 561 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 APBB1IPQ7Z5R6 666 aaPredicted RBP9.91□□□□□ -0.82
SMN2-214ENST00000626847 PDGFDQ9GZP0 370 aaPredicted RBP9.91□□□□□ -0.82
SMN2-214ENST00000626847 RSPH14Q9UHP6 348 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 RPS6KL1Q9Y6S9 549 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 NRAPQ86VF7 1730 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 SHANK3Q9BYB0 1731 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 CASZ1Q86V15 1759 aa9.91□□□□□ -0.82
SMN2-214ENST00000626847 ZBTB7AO95365 584 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 SEC13P55735 322 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 PSMC1P62191 440 aaKnown RBP9.9□□□□□ -0.82
SMN2-214ENST00000626847 NOM1Q5C9Z4 860 aaKnown RBP9.9□□□□□ -0.82
SMN2-214ENST00000626847 CCDC102BQ68D86 513 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 PHLDB3Q6NSJ2 640 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 FAM184AQ8NB25 1140 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 MAGEC2Q9UBF1 373 aaPredicted RBP9.9□□□□□ -0.82
SMN2-214ENST00000626847 SPATA31A5Q5VU36 1347 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 SPATA31A7Q8IWB4 1347 aa9.9□□□□□ -0.82
SMN2-214ENST00000626847 SLFN14P0C7P3 912 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 CASQ1P31415 396 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 GGCXP38435 758 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 KCNC4Q03721 635 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 ZSCAN26Q16670 478 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 GJC2Q5T442 439 aaPredicted RBP9.9□□□□□ -0.83
SMN2-214ENST00000626847 ZKSCAN2Q63HK3 967 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 KLHL10Q6JEL2 608 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 TREML4Q6UXN2 200 aa9.9□□□□□ -0.83
SMN2-214ENST00000626847 DNAJC14Q6Y2X3 702 aaPredicted RBP9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms