RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 GNGT1P63211 74 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 SARM1Q6SZW1 724 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 RBM28Q9NW13 759 aaKnown RBP18.93■□□□□ 0.62
PACS1-201ENST00000320580 PTPRTO14522 1441 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 GOLGA6BA6NDN3 693 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 GOLGA8BA8MQT2 603 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 RNF40O75150 1001 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 USP28Q96RU2 1077 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 SUFUQ9UMX1 484 aa18.93■□□□□ 0.62
PACS1-201ENST00000320580 GCKP35557 465 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 RRP12Q5JTH9 1297 aaKnown RBP18.92■□□□□ 0.62
PACS1-201ENST00000320580 CEP85LQ5SZL2 805 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 CNPY4Q8N129 248 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 DYDC1Q8WWB3 177 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.92■□□□□ 0.62
PACS1-201ENST00000320580 PRDM15P57071 1507 aaPredicted RBP18.92■□□□□ 0.62
PACS1-201ENST00000320580 SRGAP1Q7Z6B7 1085 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 PSME1Q06323 249 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 TM6SF1Q9BZW5 370 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 LCMT1Q9UIC8 334 aa18.92■□□□□ 0.62
PACS1-201ENST00000320580 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 TTC19Q6DKK2 380 aaPredicted RBP18.91■□□□□ 0.62
PACS1-201ENST00000320580 ZNF202O95125 648 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 ARHGAP25P42331 645 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 STX17P56962 302 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 HLTFQ14527 1009 aaKnown RBP eCLIP18.91■□□□□ 0.62
PACS1-201ENST00000320580 DPCR1Q3MIW9 517 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 FAM227BQ96M60 508 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 SAMM50Q9Y512 469 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 H2AFXP16104 143 aaPredicted RBP18.91■□□□□ 0.62
PACS1-201ENST00000320580 PEX19P40855 299 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 SPA17Q15506 151 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 TADA3O75528 432 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 CCZ1BP86790 482 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 CCZ1P86791 482 aaPredicted RBP18.91■□□□□ 0.62
PACS1-201ENST00000320580 ESCO1Q5FWF5 840 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 NYAP1Q6ZVC0 841 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 ABCB6Q9NP58 842 aa18.91■□□□□ 0.62
PACS1-201ENST00000320580 ZSWIM6Q9HCJ5 1215 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 CHST3Q7LGC8 479 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 CABS1Q96KC9 395 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 SLC24A3Q9HC58 644 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 NEDD9Q14511 834 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 LONRF3Q496Y0 759 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 LSG1Q9H089 658 aaKnown RBP18.9■□□□□ 0.62
PACS1-201ENST00000320580 ODF2LQ9ULJ1 636 aa18.9■□□□□ 0.62
PACS1-201ENST00000320580 CASP8Q14790 479 aa18.89■□□□□ 0.62
PACS1-201ENST00000320580 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.62
PACS1-201ENST00000320580 N4BP2L2Q92802 583 aaPredicted RBP18.89■□□□□ 0.62
PACS1-201ENST00000320580 PA2G4Q9UQ80 394 aaKnown RBP18.89■□□□□ 0.62
PACS1-201ENST00000320580 CDKL5O76039 1030 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 FTOQ9C0B1 505 aaKnown RBP eCLIP18.89■□□□□ 0.61
PACS1-201ENST00000320580 TULP2O00295 520 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 ZNF853P0CG23 659 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 NLRP6P59044 892 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 CAPS2Q9BXY5 557 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 DNAJC5Q9H3Z4 198 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 CCDC61Q9Y6R9 512 aa18.89■□□□□ 0.61
PACS1-201ENST00000320580 TUBB2AQ13885 445 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 IGSF22Q8N9C0 903 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 TUBB2BQ9BVA1 445 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
PACS1-201ENST00000320580 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 C1orf141Q5JVX7 400 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 CDC23Q9UJX2 597 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 KIF24Q5T7B8 1368 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 ATL3Q6DD88 541 aa18.88■□□□□ 0.61
PACS1-201ENST00000320580 SND1Q7KZF4 910 aaKnown RBP eCLIP18.88■□□□□ 0.61
PACS1-201ENST00000320580 ERICH2A1L162 156 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 PI4KAP2A4QPH2 592 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 PI4KAP1Q8N8J0 262 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 SYNMO15061 1565 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 AOX1Q06278 1338 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 FUCA2Q9BTY2 467 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 NFE2L3Q9Y4A8 694 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 A0A1W2PP64 1363 aa18.87■□□□□ 0.61
PACS1-201ENST00000320580 ANXA1P04083 346 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 PGBD1Q96JS3 809 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 RPAP1Q9BWH6 1393 aaPredicted RBP18.86■□□□□ 0.61
PACS1-201ENST00000320580 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
PACS1-201ENST00000320580 AP1ARQ63HQ0 302 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 SPECC1LQ69YQ0 1117 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 ZNF446Q9NWS9 450 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 KIF1CO43896 1103 aaKnown RBP18.86■□□□□ 0.61
PACS1-201ENST00000320580 HAND2P61296 217 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 NUTM2AQ8IVF1 878 aaPredicted RBP18.86■□□□□ 0.61
PACS1-201ENST00000320580 HSPA2P54652 639 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 FAM169AQ9Y6X4 670 aa18.86■□□□□ 0.61
PACS1-201ENST00000320580 MPHOSPH10O00566 681 aaKnown RBP18.85■□□□□ 0.61
PACS1-201ENST00000320580 USO1O60763 962 aaKnown RBP18.85■□□□□ 0.61
PACS1-201ENST00000320580 FKBP4Q02790 459 aaKnown RBP eCLIP18.85■□□□□ 0.61
PACS1-201ENST00000320580 XBP1P17861 261 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 AFMP43652 599 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 ATP1A2P50993 1020 aa18.85■□□□□ 0.61
PACS1-201ENST00000320580 CFAP58Q5T655 872 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms