RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Clec11aO88200 328 aa9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 L3mbtl2P59178 703 aa9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Eif5bQ05D44 1216 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Naa15Q80UM3 865 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Sertm1Q8CD78 107 aa9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Snw1Q9CSN1 536 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Mbd3Q9Z2D8 285 aaKnown RBP9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 UtrnE9Q6R7 3430 aa9.3□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Zswim8Q3UHH1 1832 aaKnown RBP9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 DgkiD3YWQ0 1071 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Kcnh2O35219 1162 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Apba3O88888 571 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Liat1Q810M6 228 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 LmlnQ8BMN4 681 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Slx1bQ8BX32 270 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Dhrs4Q99LB2 279 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Atp2b2Q9R0K7 1198 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Atf7ipQ7TT18 1306 aa9.29□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 NktrP30415 1453 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Arfgef2A2A5R2 1792 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Gm13119B1ARV5 481 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Pde4bB1AWC9 736 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Mfap1aC0HKD8 439 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Mfap1bC0HKD9 439 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Gm21319F6YNI8 144 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Cracr2aQ3UP38 310 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Fan1Q69ZT1 1020 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Rpgrip1lQ8CG73 1264 aa9.28□□□□□ -0.92
Ccdc47-202ENSMUST00000106865 Rbbp8nlA2ABX0 614 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Tmf1B9EKI3 1091 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Irs1P35569 1233 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Gbp1Q01514 589 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Zscan10Q3URR7 782 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Sorbs1Q62417 1290 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Pank3Q8R2W9 370 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Prkrip1Q9CWV6 186 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Zcrb1Q9CZ96 217 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Bcs1lQ9CZP5 418 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Zeb2Q9R0G7 1215 aa9.27□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 PrxO55103 1391 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Dmrtb1A2A9I7 359 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Lzts3A2AHG0 700 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Slc16a10Q3U9N9 512 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Wasf2Q8BH43 497 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Ssuh2Q8C3L1 340 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Trpc5Q9QX29 975 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Eif2ak3Q9Z2B5 1114 aa9.26□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Ifit1bl1D3Z6F0 470 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Rasal2E9PW37 1286 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Pdzd7E9Q9W7 1021 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 NfiaQ02780 532 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Zfp444Q3TDV8 331 aaKnown RBP9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 4933416C03RikQ3V063 378 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 TbceQ8CIV8 524 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Galntl5Q9D4M9 431 aa9.25□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Gm21671G3UY31 267 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 PrkcshO08795 521 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Srpk2O54781 681 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 PamP97467 979 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Npas4Q8BGD7 802 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 B430218F22RikQ8BQR5 223 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Angel2Q8K1C0 544 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Ecel1Q9JMI0 775 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Srcin1Q9QWI6 1250 aa9.24□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 AampJ3QN89 436 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Mboat4P0C7A3 435 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Cyp17a1P27786 507 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Rad23bP54728 416 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Mapk1P63085 358 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Fam184bQ0KK56 942 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 EndouQ3V188 412 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Pim2Q62070 370 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Hirip3Q8BLH7 601 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Dnajc22Q8CHS2 339 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Cmtr1Q9DBC3 837 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Sertad1Q9JL10 236 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Pnpla7A2AJ88 1352 aa9.23□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Kif23E9Q5G3 953 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Dnm1P39053 867 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Ptpn5P54830 541 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Limch1Q3UH68 1057 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Rbm12Q8R4X3 992 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Ipo9Q91YE6 1041 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 RtcbQ99LF4 505 aaKnown RBP9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Tcea2Q9QVN7 299 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Gprasp1Q5U4C1 1347 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Abca3Q8R420 1704 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 Nsd3Q6P2L6 1439 aa9.22□□□□□ -0.93
Ccdc47-202ENSMUST00000106865 MaptP10637 733 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Vps33bP59016 617 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Gse1Q3U3C9 1213 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ankrd23Q812A3 306 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 UstQ8BUB6 407 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Ms4a8Q99N10 290 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Elp3Q9CZX0 547 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Fam122aQ9DB52 284 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Shank3Q4ACU6 1730 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Arhgap33Q80YF9 1305 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 Gm16486A0A1D5RMD1 1434 aa9.21□□□□□ -0.94
Ccdc47-202ENSMUST00000106865 FocadA2AKG8 1798 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms