Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Gm25239-201ENSMUST00000174915 86 ntBASIC42.33■■■■■ 4.37
Apba3O88888 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
Apba3O88888 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
Apba3O88888 Gm15042-201ENSMUST00000120212 883 ntBASIC37.04■■■■□ 3.52
Apba3O88888 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
Apba3O88888 Gm24109-201ENSMUST00000175489 103 ntBASIC36.65■■■■□ 3.46
Apba3O88888 Gm15045-201ENSMUST00000117359 883 ntBASIC36.27■■■■□ 3.4
Apba3O88888 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
Apba3O88888 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Apba3O88888 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.7■■■■□ 3.31
Apba3O88888 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
Apba3O88888 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
Apba3O88888 Gm23366-201ENSMUST00000175022 89 ntBASIC35.31■■■■□ 3.24
Apba3O88888 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Apba3O88888 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Apba3O88888 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Apba3O88888 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.53■■■■□ 3.12
Apba3O88888 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
Apba3O88888 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Apba3O88888 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
Apba3O88888 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.16■■■■□ 3.06
Apba3O88888 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Apba3O88888 Psd-208ENSMUST00000224556 2034 ntBASIC34.03■■■■□ 3.04
Apba3O88888 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.99■■■■□ 3.03
Apba3O88888 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.99■■■■□ 3.03
Apba3O88888 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
Apba3O88888 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Apba3O88888 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Apba3O88888 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.74■■■□□ 2.99
Apba3O88888 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.73■■■□□ 2.99
Apba3O88888 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
Apba3O88888 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Apba3O88888 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Apba3O88888 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Apba3O88888 Gm25238-201ENSMUST00000174914 89 ntBASIC33.41■■■□□ 2.94
Apba3O88888 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.28■■■□□ 2.92
Apba3O88888 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.16■■■□□ 2.9
Apba3O88888 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Apba3O88888 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Apba3O88888 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Apba3O88888 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Apba3O88888 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Apba3O88888 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Apba3O88888 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.65■■■□□ 2.82
Apba3O88888 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.59■■■□□ 2.81
Apba3O88888 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Apba3O88888 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Apba3O88888 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.49■■■□□ 2.79
Apba3O88888 Gm27325-201ENSMUST00000175467 74 ntBASIC32.48■■■□□ 2.79
Apba3O88888 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Apba3O88888 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.39■■■□□ 2.78
Apba3O88888 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Apba3O88888 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.27■■■□□ 2.76
Apba3O88888 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.18■■■□□ 2.74
Apba3O88888 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
Apba3O88888 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Apba3O88888 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Apba3O88888 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.1■■■□□ 2.73
Apba3O88888 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Apba3O88888 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Apba3O88888 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.89■■■□□ 2.7
Apba3O88888 Gm25262-201ENSMUST00000174934 133 ntBASIC31.88■■■□□ 2.69
Apba3O88888 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Apba3O88888 Rab21-202ENSMUST00000218831 843 ntBASIC31.8■■■□□ 2.68
Apba3O88888 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Apba3O88888 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Apba3O88888 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Apba3O88888 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Apba3O88888 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Apba3O88888 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.72■■■□□ 2.67
Apba3O88888 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.7■■■□□ 2.67
Apba3O88888 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Apba3O88888 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Apba3O88888 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Apba3O88888 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Apba3O88888 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Apba3O88888 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.58■■■□□ 2.65
Apba3O88888 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Apba3O88888 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Apba3O88888 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Apba3O88888 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Apba3O88888 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.49■■■□□ 2.63
Apba3O88888 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.41■■■□□ 2.62
Apba3O88888 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Apba3O88888 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.39■■■□□ 2.62
Apba3O88888 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Apba3O88888 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Apba3O88888 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Apba3O88888 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.29■■■□□ 2.6
Apba3O88888 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.25■■■□□ 2.59
Apba3O88888 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Apba3O88888 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.23■■■□□ 2.59
Apba3O88888 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Apba3O88888 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Apba3O88888 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Apba3O88888 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Apba3O88888 Gm26115-201ENSMUST00000175605 87 ntBASIC31.04■■■□□ 2.56
Apba3O88888 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Apba3O88888 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.96■■■□□ 2.55
Apba3O88888 Gm8109-201ENSMUST00000194076 746 ntBASIC30.96■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms