Protein–RNA interactions for Protein: Q8CD78

Sertm1, Serine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sertm1Q8CD78 Gm25239-201ENSMUST00000174915 86 ntBASIC34.93■■■■□ 3.18
Sertm1Q8CD78 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Sertm1Q8CD78 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Sertm1Q8CD78 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Sertm1Q8CD78 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Sertm1Q8CD78 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Sertm1Q8CD78 Gm15042-201ENSMUST00000120212 883 ntBASIC31.1■■■□□ 2.57
Sertm1Q8CD78 Psd-208ENSMUST00000224556 2034 ntBASIC30.71■■■□□ 2.51
Sertm1Q8CD78 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Sertm1Q8CD78 Gm15045-201ENSMUST00000117359 883 ntBASIC30.54■■■□□ 2.48
Sertm1Q8CD78 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
Sertm1Q8CD78 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Sertm1Q8CD78 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.08■■■□□ 2.41
Sertm1Q8CD78 Gm24109-201ENSMUST00000175489 103 ntBASIC30.02■■■□□ 2.4
Sertm1Q8CD78 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Sertm1Q8CD78 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Sertm1Q8CD78 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Sertm1Q8CD78 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Sertm1Q8CD78 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Sertm1Q8CD78 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Sertm1Q8CD78 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sertm1Q8CD78 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Sertm1Q8CD78 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Sertm1Q8CD78 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.32■■■□□ 2.28
Sertm1Q8CD78 Gm23366-201ENSMUST00000175022 89 ntBASIC29.27■■■□□ 2.28
Sertm1Q8CD78 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sertm1Q8CD78 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Sertm1Q8CD78 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Sertm1Q8CD78 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Sertm1Q8CD78 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Sertm1Q8CD78 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.01■■■□□ 2.23
Sertm1Q8CD78 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Sertm1Q8CD78 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Sertm1Q8CD78 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Sertm1Q8CD78 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Sertm1Q8CD78 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Sertm1Q8CD78 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Sertm1Q8CD78 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Sertm1Q8CD78 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Sertm1Q8CD78 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.54■■■□□ 2.16
Sertm1Q8CD78 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.52■■■□□ 2.16
Sertm1Q8CD78 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Sertm1Q8CD78 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.28■■■□□ 2.12
Sertm1Q8CD78 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sertm1Q8CD78 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sertm1Q8CD78 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.23■■■□□ 2.11
Sertm1Q8CD78 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Sertm1Q8CD78 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Sertm1Q8CD78 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28■■■□□ 2.07
Sertm1Q8CD78 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sertm1Q8CD78 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Sertm1Q8CD78 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sertm1Q8CD78 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Sertm1Q8CD78 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.67■■■□□ 2.02
Sertm1Q8CD78 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Sertm1Q8CD78 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Sertm1Q8CD78 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sertm1Q8CD78 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.61■■■□□ 2.01
Sertm1Q8CD78 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Sertm1Q8CD78 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.53■■■□□ 2
Sertm1Q8CD78 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Sertm1Q8CD78 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.52■■■□□ 2
Sertm1Q8CD78 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Sertm1Q8CD78 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Sertm1Q8CD78 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.48■■□□□ 1.99
Sertm1Q8CD78 Gm27325-201ENSMUST00000175467 74 ntBASIC27.4■■□□□ 1.98
Sertm1Q8CD78 Gm25238-201ENSMUST00000174914 89 ntBASIC27.38■■□□□ 1.97
Sertm1Q8CD78 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.37■■□□□ 1.97
Sertm1Q8CD78 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.32■■□□□ 1.96
Sertm1Q8CD78 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
Sertm1Q8CD78 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.26■■□□□ 1.95
Sertm1Q8CD78 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Sertm1Q8CD78 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sertm1Q8CD78 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.13■■□□□ 1.93
Sertm1Q8CD78 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Sertm1Q8CD78 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Sertm1Q8CD78 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sertm1Q8CD78 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Sertm1Q8CD78 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Sertm1Q8CD78 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Sertm1Q8CD78 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Sertm1Q8CD78 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Sertm1Q8CD78 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sertm1Q8CD78 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Sertm1Q8CD78 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Sertm1Q8CD78 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
Sertm1Q8CD78 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Sertm1Q8CD78 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.85■■□□□ 1.89
Sertm1Q8CD78 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Sertm1Q8CD78 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sertm1Q8CD78 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sertm1Q8CD78 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sertm1Q8CD78 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sertm1Q8CD78 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.74■■□□□ 1.87
Sertm1Q8CD78 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.74■■□□□ 1.87
Sertm1Q8CD78 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sertm1Q8CD78 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Sertm1Q8CD78 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sertm1Q8CD78 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Sertm1Q8CD78 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.64■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms